BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00015971
         (437 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI26041.3| unnamed protein product [Vitis vinifera]               96   3e-18
ref|XP_002275635.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    96   3e-18
emb|CAN81123.1| hypothetical protein VITISV_038479 [Vitis vinifera]    82   3e-14
gb|AAN62787.1| Putative DEAD/DEAH box RNA helicase protein [Oryz...    75   4e-12
gb|EEC74363.1| hypothetical protein OsI_09674 [Oryza sativa Indi...    75   4e-12

>emb|CBI26041.3| unnamed protein product [Vitis vinifera]
          Length = 648

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 53/116 (45%), Positives = 70/116 (60%), Gaps = 15/116 (12%)
 Frame = -2

Query: 340 RSSGVLVKAGGYTRIPMETSGAYQLIDEETGEKCIVWG--DDDGPVPSKDVLSWKPKDKS 167
           R S V++    Y+R  M+T GAYQLID+ETGEK IVWG  DDD P+PSKDVLSW P D +
Sbjct: 37  RKSKVMLVTARYSRRQMDTPGAYQLIDDETGEKFIVWGGIDDDPPIPSKDVLSWNPVDNN 96

Query: 166 S-------------RGAVTESGDTTSARKSSAGSFGRLKVQKVRSLSRKISRVKQD 38
           +               AV +     +  K   GSFGRLK Q+V++L+ K S+ K++
Sbjct: 97  TPTPSKDGHAGIEPAAAVKKDVFPKAQTKGVTGSFGRLKAQRVKALTTKTSKAKRE 152


>ref|XP_002275635.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 50-like [Vitis
           vinifera]
          Length = 707

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 53/116 (45%), Positives = 70/116 (60%), Gaps = 15/116 (12%)
 Frame = -2

Query: 340 RSSGVLVKAGGYTRIPMETSGAYQLIDEETGEKCIVWG--DDDGPVPSKDVLSWKPKDKS 167
           R S V++    Y+R  M+T GAYQLID+ETGEK IVWG  DDD P+PSKDVLSW P D +
Sbjct: 37  RKSKVMLVTARYSRRQMDTPGAYQLIDDETGEKFIVWGGIDDDPPIPSKDVLSWNPVDNN 96

Query: 166 S-------------RGAVTESGDTTSARKSSAGSFGRLKVQKVRSLSRKISRVKQD 38
           +               AV +     +  K   GSFGRLK Q+V++L+ K S+ K++
Sbjct: 97  TPTPSKDGHAGIEPAAAVKKDVFPKAQTKGVTGSFGRLKAQRVKALTTKTSKAKRE 152


>emb|CAN81123.1| hypothetical protein VITISV_038479 [Vitis vinifera]
          Length = 337

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 49/121 (40%), Positives = 68/121 (56%), Gaps = 20/121 (16%)
 Frame = -2

Query: 340 RSSGVLVKAGGYTRIPMETSGAY-----QLIDEETGEKCIVWG--DDDGPVPSKDVLSWK 182
           R S V++    Y+R  M+T G       ++ID+ETGEK IVWG  DDD P+PSKDVLSW 
Sbjct: 37  RKSKVMLVTARYSRRQMDTPGVSLSADRKIIDDETGEKFIVWGGIDDDPPIPSKDVLSWN 96

Query: 181 PKDKSS-------------RGAVTESGDTTSARKSSAGSFGRLKVQKVRSLSRKISRVKQ 41
           P D ++               AV +     +  K   GSFGRLK Q+V++L+ K S+ K+
Sbjct: 97  PVDNNTPTPSKDGHAGIEPAAAVKKDVFPKAQTKGVTGSFGRLKAQRVKALTTKTSKAKR 156

Query: 40  D 38
           +
Sbjct: 157 E 157


>gb|AAN62787.1| Putative DEAD/DEAH box RNA helicase protein [Oryza sativa Japonica
           Group]
          Length = 758

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 46/120 (38%), Positives = 65/120 (54%), Gaps = 9/120 (7%)
 Frame = -2

Query: 343 WRSSGVLVKAGG------YTRIPMETSGAYQLIDEETGEKCIVW-GDDDGPVPSKDVLSW 185
           W ++    + GG      Y R+PM+T GAY+L+D  TG   IVW G DD  +PS  VLS 
Sbjct: 98  WAAAAATAEGGGGEEGRGYERVPMDTPGAYRLVDRATGRSVIVWGGTDDVSMPSPAVLST 157

Query: 184 KPKDKSSRGAVTESGDTTSARKSSAGSFGRLKVQKVRSLSRKISRVKQDDLG--SESEFS 11
             +               + R +S G+FGRLK QKV+ L+R+ + +K++D G  S S FS
Sbjct: 158 TTR--------VPDRPKENGRSTSIGNFGRLKAQKVKVLARRSAHLKREDSGRISTSRFS 209


>gb|EEC74363.1| hypothetical protein OsI_09674 [Oryza sativa Indica Group]
          Length = 620

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 46/120 (38%), Positives = 65/120 (54%), Gaps = 9/120 (7%)
 Frame = -2

Query: 343 WRSSGVLVKAGG------YTRIPMETSGAYQLIDEETGEKCIVW-GDDDGPVPSKDVLSW 185
           W ++    + GG      Y R+PM+T GAY+L+D  TG   IVW G DD  +PS  VLS 
Sbjct: 36  WAAAAATAEGGGGEEGRGYERVPMDTPGAYRLVDRATGRSVIVWGGTDDVSMPSPAVLST 95

Query: 184 KPKDKSSRGAVTESGDTTSARKSSAGSFGRLKVQKVRSLSRKISRVKQDDLG--SESEFS 11
             +               + R +S G+FGRLK QKV+ L+R+ + +K++D G  S S FS
Sbjct: 96  TTR--------VPDRPKENGRSTSIGNFGRLKAQKVKVLARRSAHLKREDSGRISTSRFS 147