BLASTX nr result
ID: Coptis21_contig00015971
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00015971 (437 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI26041.3| unnamed protein product [Vitis vinifera] 96 3e-18 ref|XP_002275635.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 96 3e-18 emb|CAN81123.1| hypothetical protein VITISV_038479 [Vitis vinifera] 82 3e-14 gb|AAN62787.1| Putative DEAD/DEAH box RNA helicase protein [Oryz... 75 4e-12 gb|EEC74363.1| hypothetical protein OsI_09674 [Oryza sativa Indi... 75 4e-12 >emb|CBI26041.3| unnamed protein product [Vitis vinifera] Length = 648 Score = 95.9 bits (237), Expect = 3e-18 Identities = 53/116 (45%), Positives = 70/116 (60%), Gaps = 15/116 (12%) Frame = -2 Query: 340 RSSGVLVKAGGYTRIPMETSGAYQLIDEETGEKCIVWG--DDDGPVPSKDVLSWKPKDKS 167 R S V++ Y+R M+T GAYQLID+ETGEK IVWG DDD P+PSKDVLSW P D + Sbjct: 37 RKSKVMLVTARYSRRQMDTPGAYQLIDDETGEKFIVWGGIDDDPPIPSKDVLSWNPVDNN 96 Query: 166 S-------------RGAVTESGDTTSARKSSAGSFGRLKVQKVRSLSRKISRVKQD 38 + AV + + K GSFGRLK Q+V++L+ K S+ K++ Sbjct: 97 TPTPSKDGHAGIEPAAAVKKDVFPKAQTKGVTGSFGRLKAQRVKALTTKTSKAKRE 152 >ref|XP_002275635.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 50-like [Vitis vinifera] Length = 707 Score = 95.9 bits (237), Expect = 3e-18 Identities = 53/116 (45%), Positives = 70/116 (60%), Gaps = 15/116 (12%) Frame = -2 Query: 340 RSSGVLVKAGGYTRIPMETSGAYQLIDEETGEKCIVWG--DDDGPVPSKDVLSWKPKDKS 167 R S V++ Y+R M+T GAYQLID+ETGEK IVWG DDD P+PSKDVLSW P D + Sbjct: 37 RKSKVMLVTARYSRRQMDTPGAYQLIDDETGEKFIVWGGIDDDPPIPSKDVLSWNPVDNN 96 Query: 166 S-------------RGAVTESGDTTSARKSSAGSFGRLKVQKVRSLSRKISRVKQD 38 + AV + + K GSFGRLK Q+V++L+ K S+ K++ Sbjct: 97 TPTPSKDGHAGIEPAAAVKKDVFPKAQTKGVTGSFGRLKAQRVKALTTKTSKAKRE 152 >emb|CAN81123.1| hypothetical protein VITISV_038479 [Vitis vinifera] Length = 337 Score = 82.4 bits (202), Expect = 3e-14 Identities = 49/121 (40%), Positives = 68/121 (56%), Gaps = 20/121 (16%) Frame = -2 Query: 340 RSSGVLVKAGGYTRIPMETSGAY-----QLIDEETGEKCIVWG--DDDGPVPSKDVLSWK 182 R S V++ Y+R M+T G ++ID+ETGEK IVWG DDD P+PSKDVLSW Sbjct: 37 RKSKVMLVTARYSRRQMDTPGVSLSADRKIIDDETGEKFIVWGGIDDDPPIPSKDVLSWN 96 Query: 181 PKDKSS-------------RGAVTESGDTTSARKSSAGSFGRLKVQKVRSLSRKISRVKQ 41 P D ++ AV + + K GSFGRLK Q+V++L+ K S+ K+ Sbjct: 97 PVDNNTPTPSKDGHAGIEPAAAVKKDVFPKAQTKGVTGSFGRLKAQRVKALTTKTSKAKR 156 Query: 40 D 38 + Sbjct: 157 E 157 >gb|AAN62787.1| Putative DEAD/DEAH box RNA helicase protein [Oryza sativa Japonica Group] Length = 758 Score = 75.5 bits (184), Expect = 4e-12 Identities = 46/120 (38%), Positives = 65/120 (54%), Gaps = 9/120 (7%) Frame = -2 Query: 343 WRSSGVLVKAGG------YTRIPMETSGAYQLIDEETGEKCIVW-GDDDGPVPSKDVLSW 185 W ++ + GG Y R+PM+T GAY+L+D TG IVW G DD +PS VLS Sbjct: 98 WAAAAATAEGGGGEEGRGYERVPMDTPGAYRLVDRATGRSVIVWGGTDDVSMPSPAVLST 157 Query: 184 KPKDKSSRGAVTESGDTTSARKSSAGSFGRLKVQKVRSLSRKISRVKQDDLG--SESEFS 11 + + R +S G+FGRLK QKV+ L+R+ + +K++D G S S FS Sbjct: 158 TTR--------VPDRPKENGRSTSIGNFGRLKAQKVKVLARRSAHLKREDSGRISTSRFS 209 >gb|EEC74363.1| hypothetical protein OsI_09674 [Oryza sativa Indica Group] Length = 620 Score = 75.5 bits (184), Expect = 4e-12 Identities = 46/120 (38%), Positives = 65/120 (54%), Gaps = 9/120 (7%) Frame = -2 Query: 343 WRSSGVLVKAGG------YTRIPMETSGAYQLIDEETGEKCIVW-GDDDGPVPSKDVLSW 185 W ++ + GG Y R+PM+T GAY+L+D TG IVW G DD +PS VLS Sbjct: 36 WAAAAATAEGGGGEEGRGYERVPMDTPGAYRLVDRATGRSVIVWGGTDDVSMPSPAVLST 95 Query: 184 KPKDKSSRGAVTESGDTTSARKSSAGSFGRLKVQKVRSLSRKISRVKQDDLG--SESEFS 11 + + R +S G+FGRLK QKV+ L+R+ + +K++D G S S FS Sbjct: 96 TTR--------VPDRPKENGRSTSIGNFGRLKAQKVKVLARRSAHLKREDSGRISTSRFS 147