BLASTX nr result
ID: Coptis21_contig00015955
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00015955 (984 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002267263.1| PREDICTED: pentatricopeptide repeat-containi... 239 7e-61 emb|CAN75494.1| hypothetical protein VITISV_030525 [Vitis vinifera] 239 7e-61 ref|XP_003533718.1| PREDICTED: pentatricopeptide repeat-containi... 236 6e-60 ref|XP_003546411.1| PREDICTED: pentatricopeptide repeat-containi... 231 2e-58 ref|XP_004148341.1| PREDICTED: pentatricopeptide repeat-containi... 229 1e-57 >ref|XP_002267263.1| PREDICTED: pentatricopeptide repeat-containing protein At2g18940 [Vitis vinifera] gi|297735424|emb|CBI17864.3| unnamed protein product [Vitis vinifera] Length = 821 Score = 239 bits (610), Expect = 7e-61 Identities = 117/185 (63%), Positives = 149/185 (80%) Frame = +1 Query: 430 SLEFLSAKGKSXXXXXXXXPISDLKSFFDSVESELCEVDVVSLLKGLEISGNWSKAVLLF 609 S+EFLS KGK P+ L FFDSV+ EL +VD+VSLLKGL++SGNW +AVLLF Sbjct: 99 SVEFLSRKGKFLLNSIVEHPLPGLNDFFDSVKFELLDVDLVSLLKGLDLSGNWKRAVLLF 158 Query: 610 QWLHSNSNSENTRRLNDQVIEVMIRILGRESQHSIACKLFDAVPVEDYSLDVRSFTSVLH 789 +W N S N ++++Q++E+M+RILGRESQHS+A +L D + VE+YSLDVR++T++LH Sbjct: 159 KWAILNLYSRN-EKIDNQLVELMVRILGRESQHSVALRLLDEISVEEYSLDVRAWTTILH 217 Query: 790 AYARTGKYERAISLFEAIKAKGLKPTLVTYNVMLDVYGKMGRSWNKILELLDEIRNNELE 969 AY+R GKYERAI++FE ++ GL PTLVTYNVMLDVYGKMGRSWNKIL LLDE+R+N LE Sbjct: 218 AYSRIGKYERAITMFEKMRKTGLSPTLVTYNVMLDVYGKMGRSWNKILGLLDEMRSNGLE 277 Query: 970 FDEFT 984 FDEFT Sbjct: 278 FDEFT 282 >emb|CAN75494.1| hypothetical protein VITISV_030525 [Vitis vinifera] Length = 821 Score = 239 bits (610), Expect = 7e-61 Identities = 117/185 (63%), Positives = 149/185 (80%) Frame = +1 Query: 430 SLEFLSAKGKSXXXXXXXXPISDLKSFFDSVESELCEVDVVSLLKGLEISGNWSKAVLLF 609 S+EFLS KGK P+ L FFDSV+ EL +VD+VSLLKGL++SGNW +AVLLF Sbjct: 99 SVEFLSRKGKFLLNSIVEHPLPGLNDFFDSVKFELLDVDLVSLLKGLDLSGNWKRAVLLF 158 Query: 610 QWLHSNSNSENTRRLNDQVIEVMIRILGRESQHSIACKLFDAVPVEDYSLDVRSFTSVLH 789 +W N S N ++++Q++E+M+RILGRESQHS+A +L D + VE+YSLDVR++T++LH Sbjct: 159 KWAILNLYSRN-EKIDNQLVELMVRILGRESQHSVALRLLDEISVEEYSLDVRAWTTILH 217 Query: 790 AYARTGKYERAISLFEAIKAKGLKPTLVTYNVMLDVYGKMGRSWNKILELLDEIRNNELE 969 AY+R GKYERAI++FE ++ GL PTLVTYNVMLDVYGKMGRSWNKIL LLDE+R+N LE Sbjct: 218 AYSRIGKYERAITMFEKMRKTGLSPTLVTYNVMLDVYGKMGRSWNKILGLLDEMRSNGLE 277 Query: 970 FDEFT 984 FDEFT Sbjct: 278 FDEFT 282 >ref|XP_003533718.1| PREDICTED: pentatricopeptide repeat-containing protein At2g18940-like [Glycine max] Length = 830 Score = 236 bits (602), Expect = 6e-60 Identities = 120/204 (58%), Positives = 150/204 (73%) Frame = +1 Query: 373 PIIKAPQFDYSGVGFGDGDSLEFLSAKGKSXXXXXXXXPISDLKSFFDSVESELCEVDVV 552 PII QFD + FLS KGK P+ +L FF+SV+ EL E D Sbjct: 94 PIIDEDQFDDA--------KFRFLSDKGKLLLNSVVGSPLHELNDFFNSVKFELLEADFP 145 Query: 553 SLLKGLEISGNWSKAVLLFQWLHSNSNSENTRRLNDQVIEVMIRILGRESQHSIACKLFD 732 SLLK L++SGNW +A+LLF+W + S+ RL++QV+E+M+RILGRESQHSIA KLFD Sbjct: 146 SLLKALDLSGNWERALLLFEWGWLHFGSDQNLRLDNQVVELMVRILGRESQHSIASKLFD 205 Query: 733 AVPVEDYSLDVRSFTSVLHAYARTGKYERAISLFEAIKAKGLKPTLVTYNVMLDVYGKMG 912 +PVE YSLDVR++T++LHAYAR+GKY+RAI LF+ ++ GL PTLVTYNVMLDVYGKMG Sbjct: 206 LIPVEKYSLDVRAYTTILHAYARSGKYKRAIDLFDKMEGIGLDPTLVTYNVMLDVYGKMG 265 Query: 913 RSWNKILELLDEIRNNELEFDEFT 984 RSW +ILELLDE+R+ LEFDEFT Sbjct: 266 RSWGRILELLDEMRSKGLEFDEFT 289 >ref|XP_003546411.1| PREDICTED: pentatricopeptide repeat-containing protein At2g18940-like [Glycine max] Length = 829 Score = 231 bits (590), Expect = 2e-58 Identities = 115/188 (61%), Positives = 143/188 (76%) Frame = +1 Query: 421 DGDSLEFLSAKGKSXXXXXXXXPISDLKSFFDSVESELCEVDVVSLLKGLEISGNWSKAV 600 D FLS KGK P+ +L FF+SV+ EL E D SLLK L++SGNW +A+ Sbjct: 101 DDAKFGFLSDKGKLLFSSIVGSPLHELNDFFNSVKFELLEADFPSLLKALDLSGNWERAL 160 Query: 601 LLFQWLHSNSNSENTRRLNDQVIEVMIRILGRESQHSIACKLFDAVPVEDYSLDVRSFTS 780 LLF+W + S+ RL++QV+E+M+RILGRESQHSIA KLFD +PVE YSLDVR++T+ Sbjct: 161 LLFEWGWLHFGSDQNLRLDNQVVELMVRILGRESQHSIASKLFDLIPVEKYSLDVRAYTT 220 Query: 781 VLHAYARTGKYERAISLFEAIKAKGLKPTLVTYNVMLDVYGKMGRSWNKILELLDEIRNN 960 +LH+YARTGKY+RAI LF +K GL PTLVTYNVMLDVYGKMGRSW++ILELLDE+R+ Sbjct: 221 ILHSYARTGKYKRAIDLFGKMKEIGLDPTLVTYNVMLDVYGKMGRSWDRILELLDEMRSK 280 Query: 961 ELEFDEFT 984 LE DEFT Sbjct: 281 GLELDEFT 288 >ref|XP_004148341.1| PREDICTED: pentatricopeptide repeat-containing protein At2g18940-like [Cucumis sativus] gi|449507064|ref|XP_004162923.1| PREDICTED: pentatricopeptide repeat-containing protein At2g18940-like [Cucumis sativus] Length = 844 Score = 229 bits (583), Expect = 1e-57 Identities = 118/209 (56%), Positives = 157/209 (75%), Gaps = 2/209 (0%) Frame = +1 Query: 364 QIKPII--KAPQFDYSGVGFGDGDSLEFLSAKGKSXXXXXXXXPISDLKSFFDSVESELC 537 Q+K ++ APQF+YS DG L+FLS KG P L + FDSV+SEL Sbjct: 99 QLKKLVLNSAPQFEYSDKEIRDGP-LQFLSKKGICLLNSIAAEPFDSLNALFDSVKSELL 157 Query: 538 EVDVVSLLKGLEISGNWSKAVLLFQWLHSNSNSENTRRLNDQVIEVMIRILGRESQHSIA 717 EVD+VSLLK L++ G +A+LLF+W+ SNS S + + L+ + +E+MIRILGRES++SIA Sbjct: 158 EVDIVSLLKALDVLGKSERAILLFEWVVSNSVSGDVK-LDSKAVELMIRILGRESKYSIA 216 Query: 718 CKLFDAVPVEDYSLDVRSFTSVLHAYARTGKYERAISLFEAIKAKGLKPTLVTYNVMLDV 897 KL D +P++ YSLDVR+ T++LHAY+R GKY++AI++FE +K GL P+LVTYNVMLDV Sbjct: 217 LKLLDKIPIDKYSLDVRACTTILHAYSRNGKYKQAIAMFERMKDCGLSPSLVTYNVMLDV 276 Query: 898 YGKMGRSWNKILELLDEIRNNELEFDEFT 984 YGKMGRSW+KIL+LLDE+RN L+FDEFT Sbjct: 277 YGKMGRSWDKILDLLDEMRNEGLQFDEFT 305 Score = 57.0 bits (136), Expect = 7e-06 Identities = 41/160 (25%), Positives = 83/160 (51%), Gaps = 3/160 (1%) Frame = +1 Query: 490 ISDLKSFFDSVESELCEVDVVS---LLKGLEISGNWSKAVLLFQWLHSNSNSENTRRLND 660 I++ K FF ++S E V+ LL+ +G +S+A+ + + + N+ + ++ N+ Sbjct: 319 INEAKEFFVELKSSGYEPGTVTYNALLQVFGKAGIYSEALNILKEMEDNNCTLDSVTYNE 378 Query: 661 QVIEVMIRILGRESQHSIACKLFDAVPVEDYSLDVRSFTSVLHAYARTGKYERAISLFEA 840 V + R + + D + + + ++T+V++AY R GK +A+ LF Sbjct: 379 LVAAYV-----RAGFYEEGATVIDTMTRKGVMPNAVTYTTVINAYGRAGKEVKALQLFNQ 433 Query: 841 IKAKGLKPTLVTYNVMLDVYGKMGRSWNKILELLDEIRNN 960 +K G P + TYN +L + GK RS +++++L ++R N Sbjct: 434 MKKSGCVPNVCTYNSILALLGKKSRS-EEMIKILSDMRIN 472