BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00015955
         (984 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267263.1| PREDICTED: pentatricopeptide repeat-containi...   239   7e-61
emb|CAN75494.1| hypothetical protein VITISV_030525 [Vitis vinifera]   239   7e-61
ref|XP_003533718.1| PREDICTED: pentatricopeptide repeat-containi...   236   6e-60
ref|XP_003546411.1| PREDICTED: pentatricopeptide repeat-containi...   231   2e-58
ref|XP_004148341.1| PREDICTED: pentatricopeptide repeat-containi...   229   1e-57

>ref|XP_002267263.1| PREDICTED: pentatricopeptide repeat-containing protein At2g18940
           [Vitis vinifera] gi|297735424|emb|CBI17864.3| unnamed
           protein product [Vitis vinifera]
          Length = 821

 Score =  239 bits (610), Expect = 7e-61
 Identities = 117/185 (63%), Positives = 149/185 (80%)
 Frame = +1

Query: 430 SLEFLSAKGKSXXXXXXXXPISDLKSFFDSVESELCEVDVVSLLKGLEISGNWSKAVLLF 609
           S+EFLS KGK         P+  L  FFDSV+ EL +VD+VSLLKGL++SGNW +AVLLF
Sbjct: 99  SVEFLSRKGKFLLNSIVEHPLPGLNDFFDSVKFELLDVDLVSLLKGLDLSGNWKRAVLLF 158

Query: 610 QWLHSNSNSENTRRLNDQVIEVMIRILGRESQHSIACKLFDAVPVEDYSLDVRSFTSVLH 789
           +W   N  S N  ++++Q++E+M+RILGRESQHS+A +L D + VE+YSLDVR++T++LH
Sbjct: 159 KWAILNLYSRN-EKIDNQLVELMVRILGRESQHSVALRLLDEISVEEYSLDVRAWTTILH 217

Query: 790 AYARTGKYERAISLFEAIKAKGLKPTLVTYNVMLDVYGKMGRSWNKILELLDEIRNNELE 969
           AY+R GKYERAI++FE ++  GL PTLVTYNVMLDVYGKMGRSWNKIL LLDE+R+N LE
Sbjct: 218 AYSRIGKYERAITMFEKMRKTGLSPTLVTYNVMLDVYGKMGRSWNKILGLLDEMRSNGLE 277

Query: 970 FDEFT 984
           FDEFT
Sbjct: 278 FDEFT 282


>emb|CAN75494.1| hypothetical protein VITISV_030525 [Vitis vinifera]
          Length = 821

 Score =  239 bits (610), Expect = 7e-61
 Identities = 117/185 (63%), Positives = 149/185 (80%)
 Frame = +1

Query: 430 SLEFLSAKGKSXXXXXXXXPISDLKSFFDSVESELCEVDVVSLLKGLEISGNWSKAVLLF 609
           S+EFLS KGK         P+  L  FFDSV+ EL +VD+VSLLKGL++SGNW +AVLLF
Sbjct: 99  SVEFLSRKGKFLLNSIVEHPLPGLNDFFDSVKFELLDVDLVSLLKGLDLSGNWKRAVLLF 158

Query: 610 QWLHSNSNSENTRRLNDQVIEVMIRILGRESQHSIACKLFDAVPVEDYSLDVRSFTSVLH 789
           +W   N  S N  ++++Q++E+M+RILGRESQHS+A +L D + VE+YSLDVR++T++LH
Sbjct: 159 KWAILNLYSRN-EKIDNQLVELMVRILGRESQHSVALRLLDEISVEEYSLDVRAWTTILH 217

Query: 790 AYARTGKYERAISLFEAIKAKGLKPTLVTYNVMLDVYGKMGRSWNKILELLDEIRNNELE 969
           AY+R GKYERAI++FE ++  GL PTLVTYNVMLDVYGKMGRSWNKIL LLDE+R+N LE
Sbjct: 218 AYSRIGKYERAITMFEKMRKTGLSPTLVTYNVMLDVYGKMGRSWNKILGLLDEMRSNGLE 277

Query: 970 FDEFT 984
           FDEFT
Sbjct: 278 FDEFT 282


>ref|XP_003533718.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g18940-like [Glycine max]
          Length = 830

 Score =  236 bits (602), Expect = 6e-60
 Identities = 120/204 (58%), Positives = 150/204 (73%)
 Frame = +1

Query: 373 PIIKAPQFDYSGVGFGDGDSLEFLSAKGKSXXXXXXXXPISDLKSFFDSVESELCEVDVV 552
           PII   QFD +           FLS KGK         P+ +L  FF+SV+ EL E D  
Sbjct: 94  PIIDEDQFDDA--------KFRFLSDKGKLLLNSVVGSPLHELNDFFNSVKFELLEADFP 145

Query: 553 SLLKGLEISGNWSKAVLLFQWLHSNSNSENTRRLNDQVIEVMIRILGRESQHSIACKLFD 732
           SLLK L++SGNW +A+LLF+W   +  S+   RL++QV+E+M+RILGRESQHSIA KLFD
Sbjct: 146 SLLKALDLSGNWERALLLFEWGWLHFGSDQNLRLDNQVVELMVRILGRESQHSIASKLFD 205

Query: 733 AVPVEDYSLDVRSFTSVLHAYARTGKYERAISLFEAIKAKGLKPTLVTYNVMLDVYGKMG 912
            +PVE YSLDVR++T++LHAYAR+GKY+RAI LF+ ++  GL PTLVTYNVMLDVYGKMG
Sbjct: 206 LIPVEKYSLDVRAYTTILHAYARSGKYKRAIDLFDKMEGIGLDPTLVTYNVMLDVYGKMG 265

Query: 913 RSWNKILELLDEIRNNELEFDEFT 984
           RSW +ILELLDE+R+  LEFDEFT
Sbjct: 266 RSWGRILELLDEMRSKGLEFDEFT 289


>ref|XP_003546411.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g18940-like [Glycine max]
          Length = 829

 Score =  231 bits (590), Expect = 2e-58
 Identities = 115/188 (61%), Positives = 143/188 (76%)
 Frame = +1

Query: 421 DGDSLEFLSAKGKSXXXXXXXXPISDLKSFFDSVESELCEVDVVSLLKGLEISGNWSKAV 600
           D     FLS KGK         P+ +L  FF+SV+ EL E D  SLLK L++SGNW +A+
Sbjct: 101 DDAKFGFLSDKGKLLFSSIVGSPLHELNDFFNSVKFELLEADFPSLLKALDLSGNWERAL 160

Query: 601 LLFQWLHSNSNSENTRRLNDQVIEVMIRILGRESQHSIACKLFDAVPVEDYSLDVRSFTS 780
           LLF+W   +  S+   RL++QV+E+M+RILGRESQHSIA KLFD +PVE YSLDVR++T+
Sbjct: 161 LLFEWGWLHFGSDQNLRLDNQVVELMVRILGRESQHSIASKLFDLIPVEKYSLDVRAYTT 220

Query: 781 VLHAYARTGKYERAISLFEAIKAKGLKPTLVTYNVMLDVYGKMGRSWNKILELLDEIRNN 960
           +LH+YARTGKY+RAI LF  +K  GL PTLVTYNVMLDVYGKMGRSW++ILELLDE+R+ 
Sbjct: 221 ILHSYARTGKYKRAIDLFGKMKEIGLDPTLVTYNVMLDVYGKMGRSWDRILELLDEMRSK 280

Query: 961 ELEFDEFT 984
            LE DEFT
Sbjct: 281 GLELDEFT 288


>ref|XP_004148341.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g18940-like [Cucumis sativus]
           gi|449507064|ref|XP_004162923.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At2g18940-like [Cucumis sativus]
          Length = 844

 Score =  229 bits (583), Expect = 1e-57
 Identities = 118/209 (56%), Positives = 157/209 (75%), Gaps = 2/209 (0%)
 Frame = +1

Query: 364 QIKPII--KAPQFDYSGVGFGDGDSLEFLSAKGKSXXXXXXXXPISDLKSFFDSVESELC 537
           Q+K ++   APQF+YS     DG  L+FLS KG          P   L + FDSV+SEL 
Sbjct: 99  QLKKLVLNSAPQFEYSDKEIRDGP-LQFLSKKGICLLNSIAAEPFDSLNALFDSVKSELL 157

Query: 538 EVDVVSLLKGLEISGNWSKAVLLFQWLHSNSNSENTRRLNDQVIEVMIRILGRESQHSIA 717
           EVD+VSLLK L++ G   +A+LLF+W+ SNS S + + L+ + +E+MIRILGRES++SIA
Sbjct: 158 EVDIVSLLKALDVLGKSERAILLFEWVVSNSVSGDVK-LDSKAVELMIRILGRESKYSIA 216

Query: 718 CKLFDAVPVEDYSLDVRSFTSVLHAYARTGKYERAISLFEAIKAKGLKPTLVTYNVMLDV 897
            KL D +P++ YSLDVR+ T++LHAY+R GKY++AI++FE +K  GL P+LVTYNVMLDV
Sbjct: 217 LKLLDKIPIDKYSLDVRACTTILHAYSRNGKYKQAIAMFERMKDCGLSPSLVTYNVMLDV 276

Query: 898 YGKMGRSWNKILELLDEIRNNELEFDEFT 984
           YGKMGRSW+KIL+LLDE+RN  L+FDEFT
Sbjct: 277 YGKMGRSWDKILDLLDEMRNEGLQFDEFT 305



 Score = 57.0 bits (136), Expect = 7e-06
 Identities = 41/160 (25%), Positives = 83/160 (51%), Gaps = 3/160 (1%)
 Frame = +1

Query: 490 ISDLKSFFDSVESELCEVDVVS---LLKGLEISGNWSKAVLLFQWLHSNSNSENTRRLND 660
           I++ K FF  ++S   E   V+   LL+    +G +S+A+ + + +  N+ + ++   N+
Sbjct: 319 INEAKEFFVELKSSGYEPGTVTYNALLQVFGKAGIYSEALNILKEMEDNNCTLDSVTYNE 378

Query: 661 QVIEVMIRILGRESQHSIACKLFDAVPVEDYSLDVRSFTSVLHAYARTGKYERAISLFEA 840
            V   +     R   +     + D +  +    +  ++T+V++AY R GK  +A+ LF  
Sbjct: 379 LVAAYV-----RAGFYEEGATVIDTMTRKGVMPNAVTYTTVINAYGRAGKEVKALQLFNQ 433

Query: 841 IKAKGLKPTLVTYNVMLDVYGKMGRSWNKILELLDEIRNN 960
           +K  G  P + TYN +L + GK  RS  +++++L ++R N
Sbjct: 434 MKKSGCVPNVCTYNSILALLGKKSRS-EEMIKILSDMRIN 472