BLASTX nr result

ID: Coptis21_contig00015954 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00015954
         (459 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635039.1| PREDICTED: uncharacterized protein LOC100855...    93   2e-17
ref|XP_002269970.1| PREDICTED: uncharacterized protein LOC100254...    91   7e-17
ref|XP_002522759.1| conserved hypothetical protein [Ricinus comm...    89   5e-16
gb|ABK93642.1| unknown [Populus trichocarpa] gi|118483908|gb|ABK...    88   8e-16
ref|XP_002300377.1| predicted protein [Populus trichocarpa] gi|2...    86   4e-15

>ref|XP_003635039.1| PREDICTED: uncharacterized protein LOC100855374 [Vitis vinifera]
          Length = 90

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 43/84 (51%), Positives = 58/84 (69%)
 Frame = +1

Query: 208 TMAVPEKLMKYKFHFMFSTXXXXXXXXXXXXAPRFLTILSYFWPLFMSTALFLFAVLFFG 387
           TM +  KLM+Y++HF+ +             APRFLTIL+YFWPLF+STA+ L  ++ FG
Sbjct: 4   TMEIQTKLMQYQYHFIITVVVSIILALLFQVAPRFLTILAYFWPLFVSTAVLLMVMIVFG 63

Query: 388 RISPLVSEISSDKPGEGLLDYVAG 459
           ++SP  +EI  +K GEGLLDYVAG
Sbjct: 64  QLSPPSTEIHGEKTGEGLLDYVAG 87


>ref|XP_002269970.1| PREDICTED: uncharacterized protein LOC100254592 [Vitis vinifera]
           gi|297736712|emb|CBI25748.3| unnamed protein product
           [Vitis vinifera]
          Length = 86

 Score = 91.3 bits (225), Expect = 7e-17
 Identities = 42/83 (50%), Positives = 57/83 (68%)
 Frame = +1

Query: 211 MAVPEKLMKYKFHFMFSTXXXXXXXXXXXXAPRFLTILSYFWPLFMSTALFLFAVLFFGR 390
           M +  KLM+Y++HF+ +             APRFLTIL+YFWPLF+STA+ L  ++ FG+
Sbjct: 1   MEIQTKLMQYQYHFIITVVVSIILALLFQVAPRFLTILAYFWPLFVSTAVLLMVMIVFGQ 60

Query: 391 ISPLVSEISSDKPGEGLLDYVAG 459
           +SP  +EI  +K GEGLLDYVAG
Sbjct: 61  LSPPSTEIHGEKTGEGLLDYVAG 83


>ref|XP_002522759.1| conserved hypothetical protein [Ricinus communis]
           gi|223537997|gb|EEF39610.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 97

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 46/83 (55%), Positives = 57/83 (68%)
 Frame = +1

Query: 211 MAVPEKLMKYKFHFMFSTXXXXXXXXXXXXAPRFLTILSYFWPLFMSTALFLFAVLFFGR 390
           M + E +MKYK+  +F T            AP F+TIL+YFWPLF+STALFL AV+FFG+
Sbjct: 1   MEIQEMVMKYKYLIIF-TFTVCILGAVIYVAPSFMTILAYFWPLFLSTALFLAAVVFFGK 59

Query: 391 ISPLVSEISSDKPGEGLLDYVAG 459
            S   +E+S DK GEGLLDYVAG
Sbjct: 60  TSLPGTELSGDKAGEGLLDYVAG 82


>gb|ABK93642.1| unknown [Populus trichocarpa] gi|118483908|gb|ABK93844.1| unknown
           [Populus trichocarpa]
          Length = 95

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 45/83 (54%), Positives = 55/83 (66%)
 Frame = +1

Query: 211 MAVPEKLMKYKFHFMFSTXXXXXXXXXXXXAPRFLTILSYFWPLFMSTALFLFAVLFFGR 390
           M + EKL+ YK+H  F+             AP FLTIL+YF PL +STALFL AV+FFG+
Sbjct: 1   MEIKEKLLNYKYHIFFTLVFSLILVSIIVVAPSFLTILAYFCPLLLSTALFLGAVIFFGK 60

Query: 391 ISPLVSEISSDKPGEGLLDYVAG 459
            S   ++ SSDK GEGLLDYVAG
Sbjct: 61  TSLPGTDSSSDKAGEGLLDYVAG 83


>ref|XP_002300377.1| predicted protein [Populus trichocarpa] gi|222847635|gb|EEE85182.1|
           predicted protein [Populus trichocarpa]
          Length = 95

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 44/83 (53%), Positives = 54/83 (65%)
 Frame = +1

Query: 211 MAVPEKLMKYKFHFMFSTXXXXXXXXXXXXAPRFLTILSYFWPLFMSTALFLFAVLFFGR 390
           M + EKL+ YK+H  F+             AP FLTIL+YF PL +STALFL AV+FFG+
Sbjct: 1   MEIKEKLLNYKYHIFFTLVFSLILVSIIVVAPSFLTILAYFCPLLLSTALFLGAVIFFGK 60

Query: 391 ISPLVSEISSDKPGEGLLDYVAG 459
            S   ++ SSDK  EGLLDYVAG
Sbjct: 61  TSLPGTDSSSDKAAEGLLDYVAG 83


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