BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00015953
         (413 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263865.1| PREDICTED: hydroxymethylglutaryl-CoA lyase, ...    58   5e-16
emb|CAN74167.1| hypothetical protein VITISV_010123 [Vitis vinifera]    58   5e-16
ref|XP_002314006.1| predicted protein [Populus trichocarpa] gi|2...    56   1e-15
ref|XP_003529496.1| PREDICTED: hydroxymethylglutaryl-CoA lyase, ...    61   3e-14
ref|XP_003599680.1| Hydroxymethylglutaryl-CoA lyase [Medicago tr...    57   5e-13

>ref|XP_002263865.1| PREDICTED: hydroxymethylglutaryl-CoA lyase, mitochondrial [Vitis
           vinifera] gi|296083893|emb|CBI24281.3| unnamed protein
           product [Vitis vinifera]
          Length = 432

 Score = 58.2 bits (139), Expect(2) = 5e-16
 Identities = 29/64 (45%), Positives = 41/64 (64%), Gaps = 3/64 (4%)
 Frame = -1

Query: 317 SSGACRPSSIDEVGMGNCWIEGRXXXXXXXXXXEY---SKGTFVWKRHSRELSRGDSLNH 147
           SS ACRP + +++GMG+CWI+GR          +Y   ++  F WKR +RE S+GDSL  
Sbjct: 25  SSNACRPRA-EDMGMGSCWIDGRTCSSSNNCNEDYEGYTREAFQWKRQTRETSQGDSLKR 83

Query: 146 RTTS 135
           RT+S
Sbjct: 84  RTSS 87



 Score = 50.8 bits (120), Expect(2) = 5e-16
 Identities = 22/42 (52%), Positives = 28/42 (66%)
 Frame = -2

Query: 127 CNSWHLPDQQYSSQCE*QDVWKLNNKLLNGMPSYVKIVEVGP 2
           C+SW+  D QY  QC  + V  + NK L G+P +VKIVEVGP
Sbjct: 99  CDSWYSSDHQYGFQCNNKGVRGMANKFLGGIPKFVKIVEVGP 140


>emb|CAN74167.1| hypothetical protein VITISV_010123 [Vitis vinifera]
          Length = 268

 Score = 58.2 bits (139), Expect(2) = 5e-16
 Identities = 29/64 (45%), Positives = 41/64 (64%), Gaps = 3/64 (4%)
 Frame = -1

Query: 317 SSGACRPSSIDEVGMGNCWIEGRXXXXXXXXXXEY---SKGTFVWKRHSRELSRGDSLNH 147
           SS ACRP + +++GMG+CWI+GR          +Y   ++  F WKR +RE S+GDSL  
Sbjct: 25  SSNACRPRA-EDMGMGSCWIDGRTCSSSNNCNEDYEGYTREAFQWKRQTRETSQGDSLKR 83

Query: 146 RTTS 135
           RT+S
Sbjct: 84  RTSS 87



 Score = 50.8 bits (120), Expect(2) = 5e-16
 Identities = 22/42 (52%), Positives = 28/42 (66%)
 Frame = -2

Query: 127 CNSWHLPDQQYSSQCE*QDVWKLNNKLLNGMPSYVKIVEVGP 2
           C+SW+  D QY  QC  + V  + NK L G+P +VKIVEVGP
Sbjct: 99  CDSWYSSDHQYGFQCNNKGVRGMANKFLGGIPKFVKIVEVGP 140


>ref|XP_002314006.1| predicted protein [Populus trichocarpa] gi|222850414|gb|EEE87961.1|
           predicted protein [Populus trichocarpa]
          Length = 429

 Score = 56.2 bits (134), Expect(2) = 1e-15
 Identities = 31/63 (49%), Positives = 40/63 (63%), Gaps = 2/63 (3%)
 Frame = -1

Query: 317 SSGACRPSSIDEVGMGNCWIEGR--XXXXXXXXXXEYSKGTFVWKRHSRELSRGDSLNHR 144
           SSGACRP + D++GMG+CWIEGR            EY++ TF WKRH+R+  +G   N R
Sbjct: 26  SSGACRPRA-DDIGMGHCWIEGRICSSSNSCEEDYEYTRETFPWKRHTRDPCQG---NRR 81

Query: 143 TTS 135
           T S
Sbjct: 82  TMS 84



 Score = 51.2 bits (121), Expect(2) = 1e-15
 Identities = 22/42 (52%), Positives = 30/42 (71%)
 Frame = -2

Query: 127 CNSWHLPDQQYSSQCE*QDVWKLNNKLLNGMPSYVKIVEVGP 2
           C+S + PD QYSS+   +D+  + NK L G+P +VKIVEVGP
Sbjct: 96  CDSRYFPDHQYSSKSNDKDIRDITNKFLKGIPKFVKIVEVGP 137


>ref|XP_003529496.1| PREDICTED: hydroxymethylglutaryl-CoA lyase, mitochondrial-like
           [Glycine max]
          Length = 433

 Score = 61.2 bits (147), Expect(2) = 3e-14
 Identities = 30/65 (46%), Positives = 41/65 (63%), Gaps = 3/65 (4%)
 Frame = -1

Query: 317 SSGACRPSSIDEVGMGNCWIEGRXXXXXXXXXXE---YSKGTFVWKRHSRELSRGDSLNH 147
           SS ACRP  +D +GMGNCWIEGR          +   Y+  TF W+R +R+LSRGDS + 
Sbjct: 26  SSAACRPR-VDNLGMGNCWIEGRSCSTSNSCDEDNEEYTAETFPWRRQTRDLSRGDSFSQ 84

Query: 146 RTTSL 132
           +T ++
Sbjct: 85  KTMTM 89



 Score = 41.6 bits (96), Expect(2) = 3e-14
 Identities = 20/43 (46%), Positives = 28/43 (65%)
 Frame = -2

Query: 130 ICNSWHLPDQQYSSQCE*QDVWKLNNKLLNGMPSYVKIVEVGP 2
           I NS++  D QYS Q   ++V  +  K + G+P +VKIVEVGP
Sbjct: 99  IDNSFYASDYQYSPQSNNKNVQDMPYKFMKGIPKFVKIVEVGP 141


>ref|XP_003599680.1| Hydroxymethylglutaryl-CoA lyase [Medicago truncatula]
           gi|355488728|gb|AES69931.1| Hydroxymethylglutaryl-CoA
           lyase [Medicago truncatula]
          Length = 433

 Score = 57.4 bits (137), Expect(2) = 5e-13
 Identities = 29/62 (46%), Positives = 39/62 (62%), Gaps = 3/62 (4%)
 Frame = -1

Query: 317 SSGACRPSSIDEVGMGNCWIEGRXXXXXXXXXXE---YSKGTFVWKRHSRELSRGDSLNH 147
           SSG CRP  +D +GMGNC+IEGR          +   Y+  T+ WKR +R++SRGDS + 
Sbjct: 26  SSGCCRPQ-VDNLGMGNCFIEGRSCSTSNSCNEDNEDYTAETYPWKRQTRDMSRGDSFSP 84

Query: 146 RT 141
           RT
Sbjct: 85  RT 86



 Score = 41.6 bits (96), Expect(2) = 5e-13
 Identities = 19/41 (46%), Positives = 27/41 (65%)
 Frame = -2

Query: 124 NSWHLPDQQYSSQCE*QDVWKLNNKLLNGMPSYVKIVEVGP 2
           NS++  D QYS +   +D+  +  K + GMP +VKIVEVGP
Sbjct: 101 NSFYTSDYQYSQKRNNKDMQDMAYKFMKGMPEFVKIVEVGP 141