BLASTX nr result

ID: Coptis21_contig00015940 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00015940
         (305 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI41067.3| unnamed protein product [Vitis vinifera]              165   3e-39
ref|XP_002320600.1| predicted protein [Populus trichocarpa] gi|2...   155   2e-36
ref|XP_004163165.1| PREDICTED: HAUS augmin-like complex subunit ...   152   4e-35
ref|XP_004150336.1| PREDICTED: HAUS augmin-like complex subunit ...   152   4e-35
ref|XP_002527249.1| conserved hypothetical protein [Ricinus comm...   152   4e-35

>emb|CBI41067.3| unnamed protein product [Vitis vinifera]
          Length = 176

 Score =  165 bits (418), Expect = 3e-39
 Identities = 79/97 (81%), Positives = 90/97 (92%)
 Frame = -1

Query: 293 SGAKLCNVLGELGIEGHEKLDPDSFEWPFQYEEARPLLDWISSSLRSANVLSPSELSLHE 114
           SGA+LC +LGELG EG E LDPDSFEWPFQYE+ARP+LDWI SSLRS+NVLS SE+S +E
Sbjct: 2   SGARLCALLGELGYEGAEALDPDSFEWPFQYEDARPILDWICSSLRSSNVLSLSEVSQYE 61

Query: 113 QFLQEGKLLEGDDLDFAYDSISAFSTRKDNQDAVFGA 3
           QFL+EGKLLEG+DLDFAYDSISAFSTR+DNQ+AVFGA
Sbjct: 62  QFLEEGKLLEGEDLDFAYDSISAFSTRRDNQEAVFGA 98


>ref|XP_002320600.1| predicted protein [Populus trichocarpa] gi|222861373|gb|EEE98915.1|
           predicted protein [Populus trichocarpa]
          Length = 661

 Score =  155 bits (393), Expect = 2e-36
 Identities = 74/97 (76%), Positives = 87/97 (89%)
 Frame = -1

Query: 293 SGAKLCNVLGELGIEGHEKLDPDSFEWPFQYEEARPLLDWISSSLRSANVLSPSELSLHE 114
           SG +LC +LGELG EG E LDPDSFEWPFQY++ARP+LDWI SSLRS+NVLS S+LS +E
Sbjct: 2   SGTRLCALLGELGYEGAETLDPDSFEWPFQYDDARPILDWICSSLRSSNVLSLSDLSRYE 61

Query: 113 QFLQEGKLLEGDDLDFAYDSISAFSTRKDNQDAVFGA 3
           QFLQE KLLEG+DL+FAYDSISAFS+R+DNQ+ VFGA
Sbjct: 62  QFLQEEKLLEGEDLEFAYDSISAFSSRRDNQEEVFGA 98


>ref|XP_004163165.1| PREDICTED: HAUS augmin-like complex subunit 3-like, partial
           [Cucumis sativus]
          Length = 380

 Score =  152 bits (383), Expect = 4e-35
 Identities = 72/96 (75%), Positives = 85/96 (88%)
 Frame = -1

Query: 293 SGAKLCNVLGELGIEGHEKLDPDSFEWPFQYEEARPLLDWISSSLRSANVLSPSELSLHE 114
           SGA+LC +LGELG EG + LDPDSFEWPFQY++AR +LDWI SSLR +NVLS SELS + 
Sbjct: 2   SGARLCGLLGELGYEGAQALDPDSFEWPFQYDDARSILDWICSSLRPSNVLSHSELSQYG 61

Query: 113 QFLQEGKLLEGDDLDFAYDSISAFSTRKDNQDAVFG 6
           QFL+EGKLLEG+DLD AYDSISAFS+R+DNQDA+FG
Sbjct: 62  QFLEEGKLLEGEDLDSAYDSISAFSSRRDNQDALFG 97


>ref|XP_004150336.1| PREDICTED: HAUS augmin-like complex subunit 3-like [Cucumis
           sativus]
          Length = 615

 Score =  152 bits (383), Expect = 4e-35
 Identities = 72/96 (75%), Positives = 85/96 (88%)
 Frame = -1

Query: 293 SGAKLCNVLGELGIEGHEKLDPDSFEWPFQYEEARPLLDWISSSLRSANVLSPSELSLHE 114
           SGA+LC +LGELG EG + LDPDSFEWPFQY++AR +LDWI SSLR +NVLS SELS + 
Sbjct: 2   SGARLCGLLGELGYEGAQALDPDSFEWPFQYDDARSILDWICSSLRPSNVLSHSELSQYG 61

Query: 113 QFLQEGKLLEGDDLDFAYDSISAFSTRKDNQDAVFG 6
           QFL+EGKLLEG+DLD AYDSISAFS+R+DNQDA+FG
Sbjct: 62  QFLEEGKLLEGEDLDSAYDSISAFSSRRDNQDALFG 97


>ref|XP_002527249.1| conserved hypothetical protein [Ricinus communis]
           gi|223533342|gb|EEF35093.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 616

 Score =  152 bits (383), Expect = 4e-35
 Identities = 73/97 (75%), Positives = 85/97 (87%)
 Frame = -1

Query: 293 SGAKLCNVLGELGIEGHEKLDPDSFEWPFQYEEARPLLDWISSSLRSANVLSPSELSLHE 114
           SGA+LC +LGE+G EG   LD DSFEWPFQY++ARP+LDWI SSLR +NVLS +ELS  E
Sbjct: 2   SGARLCALLGEIGYEGANTLDADSFEWPFQYDDARPILDWICSSLRPSNVLSLAELSQCE 61

Query: 113 QFLQEGKLLEGDDLDFAYDSISAFSTRKDNQDAVFGA 3
           QFLQEGKLLEG+DLDFAYDSISAFS+ +DNQ+AVFGA
Sbjct: 62  QFLQEGKLLEGEDLDFAYDSISAFSSSRDNQEAVFGA 98


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