BLASTX nr result

ID: Coptis21_contig00015931 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00015931
         (234 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002322900.1| predicted protein [Populus trichocarpa] gi|2...    46   5e-07
ref|XP_004143297.1| PREDICTED: 3-deoxy-D-manno-octulosonic acid ...    45   6e-07
ref|XP_004170240.1| PREDICTED: 3-deoxy-D-manno-octulosonic acid ...    45   6e-07
ref|XP_002277784.1| PREDICTED: 3-deoxy-D-manno-octulosonic-acid ...    46   1e-06
emb|CBI30224.3| unnamed protein product [Vitis vinifera]               46   1e-06

>ref|XP_002322900.1| predicted protein [Populus trichocarpa] gi|222867530|gb|EEF04661.1|
           predicted protein [Populus trichocarpa]
          Length = 446

 Score = 45.8 bits (107), Expect(2) = 5e-07
 Identities = 17/25 (68%), Positives = 23/25 (92%)
 Frame = -2

Query: 161 QFAPLDTPAAVDAFLKYWSPNVVVL 87
           QF+P+DTPAA+DAFL YW+PN ++L
Sbjct: 114 QFSPIDTPAAMDAFLDYWNPNAIML 138



 Score = 32.7 bits (73), Expect(2) = 5e-07
 Identities = 13/18 (72%), Positives = 16/18 (88%)
 Frame = -3

Query: 85  LASELWPNLILGASRKGL 32
           L SELWPNLI+ +SRKG+
Sbjct: 139 LESELWPNLIMASSRKGI 156


>ref|XP_004143297.1| PREDICTED: 3-deoxy-D-manno-octulosonic acid transferase-like
           [Cucumis sativus]
          Length = 442

 Score = 44.7 bits (104), Expect(2) = 6e-07
 Identities = 16/26 (61%), Positives = 22/26 (84%)
 Frame = -2

Query: 164 FQFAPLDTPAAVDAFLKYWSPNVVVL 87
           +QFAPLDT AA+D F++YW P V++L
Sbjct: 111 YQFAPLDTAAAIDTFIEYWKPKVIIL 136



 Score = 33.5 bits (75), Expect(2) = 6e-07
 Identities = 13/18 (72%), Positives = 17/18 (94%)
 Frame = -3

Query: 85  LASELWPNLILGASRKGL 32
           + SELWPNLILGAS++G+
Sbjct: 137 MESELWPNLILGASQRGI 154


>ref|XP_004170240.1| PREDICTED: 3-deoxy-D-manno-octulosonic acid transferase-like,
           partial [Cucumis sativus]
          Length = 290

 Score = 44.7 bits (104), Expect(2) = 6e-07
 Identities = 16/26 (61%), Positives = 22/26 (84%)
 Frame = -2

Query: 164 FQFAPLDTPAAVDAFLKYWSPNVVVL 87
           +QFAPLDT AA+D F++YW P V++L
Sbjct: 110 YQFAPLDTAAAIDTFIEYWKPKVIIL 135



 Score = 33.5 bits (75), Expect(2) = 6e-07
 Identities = 13/18 (72%), Positives = 17/18 (94%)
 Frame = -3

Query: 85  LASELWPNLILGASRKGL 32
           + SELWPNLILGAS++G+
Sbjct: 136 MESELWPNLILGASQRGI 153


>ref|XP_002277784.1| PREDICTED: 3-deoxy-D-manno-octulosonic-acid transferase [Vitis
           vinifera]
          Length = 441

 Score = 46.2 bits (108), Expect(2) = 1e-06
 Identities = 19/26 (73%), Positives = 22/26 (84%)
 Frame = -2

Query: 164 FQFAPLDTPAAVDAFLKYWSPNVVVL 87
           +QFAPLD PAA+DAFL YW PN V+L
Sbjct: 111 YQFAPLDIPAAMDAFLGYWKPNAVML 136



 Score = 31.2 bits (69), Expect(2) = 1e-06
 Identities = 12/15 (80%), Positives = 14/15 (93%)
 Frame = -3

Query: 76  ELWPNLILGASRKGL 32
           ELWPNLILGA+R G+
Sbjct: 140 ELWPNLILGAARNGI 154


>emb|CBI30224.3| unnamed protein product [Vitis vinifera]
          Length = 396

 Score = 46.2 bits (108), Expect(2) = 1e-06
 Identities = 19/26 (73%), Positives = 22/26 (84%)
 Frame = -2

Query: 164 FQFAPLDTPAAVDAFLKYWSPNVVVL 87
           +QFAPLD PAA+DAFL YW PN V+L
Sbjct: 111 YQFAPLDIPAAMDAFLGYWKPNAVML 136



 Score = 31.2 bits (69), Expect(2) = 1e-06
 Identities = 12/15 (80%), Positives = 14/15 (93%)
 Frame = -3

Query: 76  ELWPNLILGASRKGL 32
           ELWPNLILGA+R G+
Sbjct: 140 ELWPNLILGAARNGI 154


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