BLASTX nr result
ID: Coptis21_contig00015931
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00015931 (234 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002322900.1| predicted protein [Populus trichocarpa] gi|2... 46 5e-07 ref|XP_004143297.1| PREDICTED: 3-deoxy-D-manno-octulosonic acid ... 45 6e-07 ref|XP_004170240.1| PREDICTED: 3-deoxy-D-manno-octulosonic acid ... 45 6e-07 ref|XP_002277784.1| PREDICTED: 3-deoxy-D-manno-octulosonic-acid ... 46 1e-06 emb|CBI30224.3| unnamed protein product [Vitis vinifera] 46 1e-06 >ref|XP_002322900.1| predicted protein [Populus trichocarpa] gi|222867530|gb|EEF04661.1| predicted protein [Populus trichocarpa] Length = 446 Score = 45.8 bits (107), Expect(2) = 5e-07 Identities = 17/25 (68%), Positives = 23/25 (92%) Frame = -2 Query: 161 QFAPLDTPAAVDAFLKYWSPNVVVL 87 QF+P+DTPAA+DAFL YW+PN ++L Sbjct: 114 QFSPIDTPAAMDAFLDYWNPNAIML 138 Score = 32.7 bits (73), Expect(2) = 5e-07 Identities = 13/18 (72%), Positives = 16/18 (88%) Frame = -3 Query: 85 LASELWPNLILGASRKGL 32 L SELWPNLI+ +SRKG+ Sbjct: 139 LESELWPNLIMASSRKGI 156 >ref|XP_004143297.1| PREDICTED: 3-deoxy-D-manno-octulosonic acid transferase-like [Cucumis sativus] Length = 442 Score = 44.7 bits (104), Expect(2) = 6e-07 Identities = 16/26 (61%), Positives = 22/26 (84%) Frame = -2 Query: 164 FQFAPLDTPAAVDAFLKYWSPNVVVL 87 +QFAPLDT AA+D F++YW P V++L Sbjct: 111 YQFAPLDTAAAIDTFIEYWKPKVIIL 136 Score = 33.5 bits (75), Expect(2) = 6e-07 Identities = 13/18 (72%), Positives = 17/18 (94%) Frame = -3 Query: 85 LASELWPNLILGASRKGL 32 + SELWPNLILGAS++G+ Sbjct: 137 MESELWPNLILGASQRGI 154 >ref|XP_004170240.1| PREDICTED: 3-deoxy-D-manno-octulosonic acid transferase-like, partial [Cucumis sativus] Length = 290 Score = 44.7 bits (104), Expect(2) = 6e-07 Identities = 16/26 (61%), Positives = 22/26 (84%) Frame = -2 Query: 164 FQFAPLDTPAAVDAFLKYWSPNVVVL 87 +QFAPLDT AA+D F++YW P V++L Sbjct: 110 YQFAPLDTAAAIDTFIEYWKPKVIIL 135 Score = 33.5 bits (75), Expect(2) = 6e-07 Identities = 13/18 (72%), Positives = 17/18 (94%) Frame = -3 Query: 85 LASELWPNLILGASRKGL 32 + SELWPNLILGAS++G+ Sbjct: 136 MESELWPNLILGASQRGI 153 >ref|XP_002277784.1| PREDICTED: 3-deoxy-D-manno-octulosonic-acid transferase [Vitis vinifera] Length = 441 Score = 46.2 bits (108), Expect(2) = 1e-06 Identities = 19/26 (73%), Positives = 22/26 (84%) Frame = -2 Query: 164 FQFAPLDTPAAVDAFLKYWSPNVVVL 87 +QFAPLD PAA+DAFL YW PN V+L Sbjct: 111 YQFAPLDIPAAMDAFLGYWKPNAVML 136 Score = 31.2 bits (69), Expect(2) = 1e-06 Identities = 12/15 (80%), Positives = 14/15 (93%) Frame = -3 Query: 76 ELWPNLILGASRKGL 32 ELWPNLILGA+R G+ Sbjct: 140 ELWPNLILGAARNGI 154 >emb|CBI30224.3| unnamed protein product [Vitis vinifera] Length = 396 Score = 46.2 bits (108), Expect(2) = 1e-06 Identities = 19/26 (73%), Positives = 22/26 (84%) Frame = -2 Query: 164 FQFAPLDTPAAVDAFLKYWSPNVVVL 87 +QFAPLD PAA+DAFL YW PN V+L Sbjct: 111 YQFAPLDIPAAMDAFLGYWKPNAVML 136 Score = 31.2 bits (69), Expect(2) = 1e-06 Identities = 12/15 (80%), Positives = 14/15 (93%) Frame = -3 Query: 76 ELWPNLILGASRKGL 32 ELWPNLILGA+R G+ Sbjct: 140 ELWPNLILGAARNGI 154