BLASTX nr result

ID: Coptis21_contig00015911 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00015911
         (436 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004136664.1| PREDICTED: uncharacterized protein At2g41620...   117   1e-24
ref|XP_002329719.1| predicted protein [Populus trichocarpa] gi|2...   116   2e-24
ref|XP_002284404.1| PREDICTED: uncharacterized protein At2g41620...   113   1e-23
ref|XP_002317735.1| predicted protein [Populus trichocarpa] gi|2...   106   2e-21
ref|XP_002519809.1| nuclear pore complex protein nup93, putative...   104   6e-21

>ref|XP_004136664.1| PREDICTED: uncharacterized protein At2g41620-like [Cucumis sativus]
           gi|449494745|ref|XP_004159635.1| PREDICTED:
           uncharacterized protein At2g41620-like [Cucumis sativus]
          Length = 863

 Score =  117 bits (293), Expect = 1e-24
 Identities = 65/138 (47%), Positives = 80/138 (57%)
 Frame = +2

Query: 2   DAFAEVAGLIRQYGAAYLRSGNLAMTLECCXXXXXXXXXXXLSWTRQANSH*QWRNHXXX 181
           D +AEVA +IRQYG+ YLR GNL+M LE             LSW+ + +   Q +     
Sbjct: 563 DPYAEVASIIRQYGSLYLRMGNLSMALEYYAQAAAALGGGQLSWSSRGSMDQQRQRTLML 622

Query: 182 XXXXXXXXYEMAVFLCYLGLGSAGEEGEFRRFLTNRKDQQQFLLEAARQCQEAGLSETSV 361
                            LG   AGEEGE RRF+T+ K +QQFLLEAARQCQEAGL + S+
Sbjct: 623 KQLLTELLLRDGGIYLLLGARGAGEEGELRRFMTDMKSRQQFLLEAARQCQEAGLYDKSI 682

Query: 362 ELHKRTGAFSMALMEVPR 415
           E+HKR GAFSMAL  + R
Sbjct: 683 EIHKRVGAFSMALDTINR 700


>ref|XP_002329719.1| predicted protein [Populus trichocarpa] gi|222870627|gb|EEF07758.1|
           predicted protein [Populus trichocarpa]
          Length = 863

 Score =  116 bits (291), Expect = 2e-24
 Identities = 66/133 (49%), Positives = 78/133 (58%)
 Frame = +2

Query: 2   DAFAEVAGLIRQYGAAYLRSGNLAMTLECCXXXXXXXXXXXLSWTRQANSH*QWRNHXXX 181
           DA+AEVA +IRQYG+AYLR GNL+M LE              SWT + N   Q +     
Sbjct: 563 DAYAEVASIIRQYGSAYLRHGNLSMALEYYAQAAATVGGGEASWTGRGNIDQQRQRSMML 622

Query: 182 XXXXXXXXYEMAVFLCYLGLGSAGEEGEFRRFLTNRKDQQQFLLEAARQCQEAGLSETSV 361
                            LG   AGEEGE  RFLT+ K++QQFLLEAAR+CQEAGL E S+
Sbjct: 623 KQLLTELLLRDGGIHLLLGPRGAGEEGELARFLTDSKERQQFLLEAARKCQEAGLDEKSI 682

Query: 362 ELHKRTGAFSMAL 400
           E+ KR GAFSMAL
Sbjct: 683 EIQKRVGAFSMAL 695


>ref|XP_002284404.1| PREDICTED: uncharacterized protein At2g41620 [Vitis vinifera]
           gi|297739625|emb|CBI29807.3| unnamed protein product
           [Vitis vinifera]
          Length = 863

 Score =  113 bits (283), Expect = 1e-23
 Identities = 62/133 (46%), Positives = 78/133 (58%)
 Frame = +2

Query: 2   DAFAEVAGLIRQYGAAYLRSGNLAMTLECCXXXXXXXXXXXLSWTRQANSH*QWRNHXXX 181
           DAFAE + +IRQYG+ YLR+G+L+  LE             LSWT + N   QW+ +   
Sbjct: 563 DAFAEASSIIRQYGSVYLRAGDLSTALEYYAQAAAAVGGGQLSWTGRGNIDQQWQRNLML 622

Query: 182 XXXXXXXXYEMAVFLCYLGLGSAGEEGEFRRFLTNRKDQQQFLLEAARQCQEAGLSETSV 361
                            LG   AGEEGE  RFLT+ K +QQFLLEA+RQCQ+AGL + S+
Sbjct: 623 KQLLTELLLRDGGIYLLLGPRGAGEEGELARFLTDVKARQQFLLEASRQCQDAGLYDQSI 682

Query: 362 ELHKRTGAFSMAL 400
           E+ KR GAFSMAL
Sbjct: 683 EIQKRIGAFSMAL 695


>ref|XP_002317735.1| predicted protein [Populus trichocarpa] gi|222858408|gb|EEE95955.1|
           predicted protein [Populus trichocarpa]
          Length = 863

 Score =  106 bits (265), Expect = 2e-21
 Identities = 61/133 (45%), Positives = 75/133 (56%)
 Frame = +2

Query: 2   DAFAEVAGLIRQYGAAYLRSGNLAMTLECCXXXXXXXXXXXLSWTRQANSH*QWRNHXXX 181
           DA+AEV+ +IRQYG+AYL  GNL+M LE              SWT + N   Q +     
Sbjct: 563 DAYAEVSSIIRQYGSAYLHHGNLSMALEYYAQAAATVGGGETSWTGRGNIDQQRQRSLML 622

Query: 182 XXXXXXXXYEMAVFLCYLGLGSAGEEGEFRRFLTNRKDQQQFLLEAARQCQEAGLSETSV 361
                            LG   AGEEGE  RFL + + +QQFLLEAAR+CQEAGL E S+
Sbjct: 623 KQLLTELLLRDGGIYFLLGPRGAGEEGELARFLIDFQARQQFLLEAARKCQEAGLDEKSI 682

Query: 362 ELHKRTGAFSMAL 400
           E+ KR GAF+MAL
Sbjct: 683 EIQKRVGAFAMAL 695


>ref|XP_002519809.1| nuclear pore complex protein nup93, putative [Ricinus communis]
           gi|223541048|gb|EEF42605.1| nuclear pore complex protein
           nup93, putative [Ricinus communis]
          Length = 710

 Score =  104 bits (260), Expect = 6e-21
 Identities = 61/133 (45%), Positives = 74/133 (55%)
 Frame = +2

Query: 2   DAFAEVAGLIRQYGAAYLRSGNLAMTLECCXXXXXXXXXXXLSWTRQANSH*QWRNHXXX 181
           DA+AEV+ +IRQYG+ YLR GNL   LE             +SWT + N   Q +     
Sbjct: 532 DAYAEVSSIIRQYGSTYLRRGNLLGALEYYAQAAAAVGGGEVSWTGRGNVDQQRQRSLML 591

Query: 182 XXXXXXXXYEMAVFLCYLGLGSAGEEGEFRRFLTNRKDQQQFLLEAARQCQEAGLSETSV 361
                            LG   AGEEGE  RFL + + +QQFLLEAARQCQEAGL + S+
Sbjct: 592 KQLLTELLLRDGGIYLLLGPRGAGEEGELVRFLNDFRVRQQFLLEAARQCQEAGLYDKSI 651

Query: 362 ELHKRTGAFSMAL 400
           E+ KR GAFSMAL
Sbjct: 652 EIQKRVGAFSMAL 664


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