BLASTX nr result
ID: Coptis21_contig00015911
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00015911 (436 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_004136664.1| PREDICTED: uncharacterized protein At2g41620... 117 1e-24 ref|XP_002329719.1| predicted protein [Populus trichocarpa] gi|2... 116 2e-24 ref|XP_002284404.1| PREDICTED: uncharacterized protein At2g41620... 113 1e-23 ref|XP_002317735.1| predicted protein [Populus trichocarpa] gi|2... 106 2e-21 ref|XP_002519809.1| nuclear pore complex protein nup93, putative... 104 6e-21 >ref|XP_004136664.1| PREDICTED: uncharacterized protein At2g41620-like [Cucumis sativus] gi|449494745|ref|XP_004159635.1| PREDICTED: uncharacterized protein At2g41620-like [Cucumis sativus] Length = 863 Score = 117 bits (293), Expect = 1e-24 Identities = 65/138 (47%), Positives = 80/138 (57%) Frame = +2 Query: 2 DAFAEVAGLIRQYGAAYLRSGNLAMTLECCXXXXXXXXXXXLSWTRQANSH*QWRNHXXX 181 D +AEVA +IRQYG+ YLR GNL+M LE LSW+ + + Q + Sbjct: 563 DPYAEVASIIRQYGSLYLRMGNLSMALEYYAQAAAALGGGQLSWSSRGSMDQQRQRTLML 622 Query: 182 XXXXXXXXYEMAVFLCYLGLGSAGEEGEFRRFLTNRKDQQQFLLEAARQCQEAGLSETSV 361 LG AGEEGE RRF+T+ K +QQFLLEAARQCQEAGL + S+ Sbjct: 623 KQLLTELLLRDGGIYLLLGARGAGEEGELRRFMTDMKSRQQFLLEAARQCQEAGLYDKSI 682 Query: 362 ELHKRTGAFSMALMEVPR 415 E+HKR GAFSMAL + R Sbjct: 683 EIHKRVGAFSMALDTINR 700 >ref|XP_002329719.1| predicted protein [Populus trichocarpa] gi|222870627|gb|EEF07758.1| predicted protein [Populus trichocarpa] Length = 863 Score = 116 bits (291), Expect = 2e-24 Identities = 66/133 (49%), Positives = 78/133 (58%) Frame = +2 Query: 2 DAFAEVAGLIRQYGAAYLRSGNLAMTLECCXXXXXXXXXXXLSWTRQANSH*QWRNHXXX 181 DA+AEVA +IRQYG+AYLR GNL+M LE SWT + N Q + Sbjct: 563 DAYAEVASIIRQYGSAYLRHGNLSMALEYYAQAAATVGGGEASWTGRGNIDQQRQRSMML 622 Query: 182 XXXXXXXXYEMAVFLCYLGLGSAGEEGEFRRFLTNRKDQQQFLLEAARQCQEAGLSETSV 361 LG AGEEGE RFLT+ K++QQFLLEAAR+CQEAGL E S+ Sbjct: 623 KQLLTELLLRDGGIHLLLGPRGAGEEGELARFLTDSKERQQFLLEAARKCQEAGLDEKSI 682 Query: 362 ELHKRTGAFSMAL 400 E+ KR GAFSMAL Sbjct: 683 EIQKRVGAFSMAL 695 >ref|XP_002284404.1| PREDICTED: uncharacterized protein At2g41620 [Vitis vinifera] gi|297739625|emb|CBI29807.3| unnamed protein product [Vitis vinifera] Length = 863 Score = 113 bits (283), Expect = 1e-23 Identities = 62/133 (46%), Positives = 78/133 (58%) Frame = +2 Query: 2 DAFAEVAGLIRQYGAAYLRSGNLAMTLECCXXXXXXXXXXXLSWTRQANSH*QWRNHXXX 181 DAFAE + +IRQYG+ YLR+G+L+ LE LSWT + N QW+ + Sbjct: 563 DAFAEASSIIRQYGSVYLRAGDLSTALEYYAQAAAAVGGGQLSWTGRGNIDQQWQRNLML 622 Query: 182 XXXXXXXXYEMAVFLCYLGLGSAGEEGEFRRFLTNRKDQQQFLLEAARQCQEAGLSETSV 361 LG AGEEGE RFLT+ K +QQFLLEA+RQCQ+AGL + S+ Sbjct: 623 KQLLTELLLRDGGIYLLLGPRGAGEEGELARFLTDVKARQQFLLEASRQCQDAGLYDQSI 682 Query: 362 ELHKRTGAFSMAL 400 E+ KR GAFSMAL Sbjct: 683 EIQKRIGAFSMAL 695 >ref|XP_002317735.1| predicted protein [Populus trichocarpa] gi|222858408|gb|EEE95955.1| predicted protein [Populus trichocarpa] Length = 863 Score = 106 bits (265), Expect = 2e-21 Identities = 61/133 (45%), Positives = 75/133 (56%) Frame = +2 Query: 2 DAFAEVAGLIRQYGAAYLRSGNLAMTLECCXXXXXXXXXXXLSWTRQANSH*QWRNHXXX 181 DA+AEV+ +IRQYG+AYL GNL+M LE SWT + N Q + Sbjct: 563 DAYAEVSSIIRQYGSAYLHHGNLSMALEYYAQAAATVGGGETSWTGRGNIDQQRQRSLML 622 Query: 182 XXXXXXXXYEMAVFLCYLGLGSAGEEGEFRRFLTNRKDQQQFLLEAARQCQEAGLSETSV 361 LG AGEEGE RFL + + +QQFLLEAAR+CQEAGL E S+ Sbjct: 623 KQLLTELLLRDGGIYFLLGPRGAGEEGELARFLIDFQARQQFLLEAARKCQEAGLDEKSI 682 Query: 362 ELHKRTGAFSMAL 400 E+ KR GAF+MAL Sbjct: 683 EIQKRVGAFAMAL 695 >ref|XP_002519809.1| nuclear pore complex protein nup93, putative [Ricinus communis] gi|223541048|gb|EEF42605.1| nuclear pore complex protein nup93, putative [Ricinus communis] Length = 710 Score = 104 bits (260), Expect = 6e-21 Identities = 61/133 (45%), Positives = 74/133 (55%) Frame = +2 Query: 2 DAFAEVAGLIRQYGAAYLRSGNLAMTLECCXXXXXXXXXXXLSWTRQANSH*QWRNHXXX 181 DA+AEV+ +IRQYG+ YLR GNL LE +SWT + N Q + Sbjct: 532 DAYAEVSSIIRQYGSTYLRRGNLLGALEYYAQAAAAVGGGEVSWTGRGNVDQQRQRSLML 591 Query: 182 XXXXXXXXYEMAVFLCYLGLGSAGEEGEFRRFLTNRKDQQQFLLEAARQCQEAGLSETSV 361 LG AGEEGE RFL + + +QQFLLEAARQCQEAGL + S+ Sbjct: 592 KQLLTELLLRDGGIYLLLGPRGAGEEGELVRFLNDFRVRQQFLLEAARQCQEAGLYDKSI 651 Query: 362 ELHKRTGAFSMAL 400 E+ KR GAFSMAL Sbjct: 652 EIQKRVGAFSMAL 664