BLASTX nr result

ID: Coptis21_contig00015908 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00015908
         (970 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI22103.3| unnamed protein product [Vitis vinifera]              207   2e-51
gb|ABK96557.1| unknown [Populus trichocarpa x Populus deltoides]      182   1e-43
ref|XP_002300875.1| predicted protein [Populus trichocarpa] gi|2...   181   3e-43
dbj|BAK02178.1| predicted protein [Hordeum vulgare subsp. vulgare]    132   2e-28
emb|CAN71458.1| hypothetical protein VITISV_007604 [Vitis vinifera]   131   3e-28

>emb|CBI22103.3| unnamed protein product [Vitis vinifera]
          Length = 291

 Score =  207 bits (528), Expect = 2e-51
 Identities = 115/278 (41%), Positives = 165/278 (59%), Gaps = 30/278 (10%)
 Frame = -2

Query: 927 NESLTFDQMSKCFNMPIADAAANLGVCSSLLKKLCRDNGLVRWPYRKFLAGKTVEEIQKD 748
           ++SL+FD +S CF++PI++AA  LGVC+S+LKK+CR+NGL RWPYRKF +G +VEEI+K 
Sbjct: 10  DKSLSFDDVSNCFSLPISEAANALGVCTSVLKKICRENGLQRWPYRKFQSGTSVEEIKKY 69

Query: 747 AAREKKREMIELARAARQKDXXXXXXXXXXT--------------------------IFQ 646
           AARE+ +E+ +L++   Q +                                     + Q
Sbjct: 70  AARERNKELAQLSKVDVQGNDALTSSAVSAAFGSQPQNDTKSSLWKMSKLHGAIPPHMLQ 129

Query: 645 HQGNSVSQDGLTNDMPHASLLRNIAC-LDEFKQGFPTTGLATVTMRWWGGRGSDGNEDEI 469
            QG+   Q+G   ++P+ASL + IA  LDEFK GFPT+GLAT + +WWG    DG E  I
Sbjct: 130 QQGSRNIQNGRPQNLPNASLSKGIAASLDEFKYGFPTSGLATASNKWWGSSSPDGYEGTI 189

Query: 468 FGEEPAVDEVSKQQLHDLADNDVEFIE---EKTDPLANKIDMGPQGTALLSSVRKAATAE 298
            G    +DE  K+Q   LADN    +    EK +    +  +GPQGT LL++VRK    E
Sbjct: 190 -GNGVEIDEEDKKQSEQLADNGANLLVMDGEKAENEKEEGTIGPQGTGLLTAVRKTTVEE 248

Query: 297 GREALKLGVFGDHGLFKPDRQEKLMLLKVFKSSMSCQW 184
           GR+ LK+GV  DHG+ K  ++E+ +LL++F SS+  QW
Sbjct: 249 GRKILKIGVGRDHGVLKAGKKERRLLLQIFGSSLPSQW 286


>gb|ABK96557.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 274

 Score =  182 bits (461), Expect = 1e-43
 Identities = 113/266 (42%), Positives = 159/266 (59%), Gaps = 8/266 (3%)
 Frame = -2

Query: 930 PNESL--TFDQMSKCFNMPIADAAANLGVCSSLLKKLCRDNGLVRWPYRKFLAGKTVEEI 757
           PN+S   +++ +SK F++P++DAA NLGVC S+LKK+CR+NGL RWPYRK+LAGK++E+I
Sbjct: 9   PNQSKPPSWEAISKHFSLPLSDAANNLGVCVSVLKKICRENGLDRWPYRKYLAGKSIEDI 68

Query: 756 QKDAAREKKREMIELARAARQKD-XXXXXXXXXXTIFQHQGNSVSQDGLTNDMPHASLLR 580
           ++ AAREK + + +LA+AA +                Q QG      G  + M    L +
Sbjct: 69  RRYAAREKIKAIADLAKAANKSGIQQQNNENSKPHKLQQQGTKDVLVGRQHIMLTPGLAK 128

Query: 579 NIACLDEFKQGFPTTGLATVTMRWWGGRGSDGNE--DEIFGEEPAVDEVSKQQLHDLADN 406
            +  LDEFK GFP+ GL+T T +WWG   SD     D    E    D    ++  D   +
Sbjct: 129 GLMGLDEFKYGFPSDGLSTATNKWWGSSLSDTQRATDRAGIETDEDDGHQSEEKVDAGTS 188

Query: 405 DVEFIEEKTD---PLANKIDMGPQGTALLSSVRKAATAEGREALKLGVFGDHGLFKPDRQ 235
            V   EEK +     +N+ID  PQGT LL+SVRK A  EGREALKLGV+  +G+ K  R+
Sbjct: 189 VVIVDEEKGENGKMESNEID--PQGTGLLTSVRKRAVEEGREALKLGVYRTYGVNKLGRK 246

Query: 234 EKLMLLKVFKSSMSCQWKFDSF*TRV 157
           ++ +LL++F SS+  QW  D    RV
Sbjct: 247 QRALLLRIFGSSLPKQWIQDFSSNRV 272


>ref|XP_002300875.1| predicted protein [Populus trichocarpa] gi|222842601|gb|EEE80148.1|
           predicted protein [Populus trichocarpa]
          Length = 274

 Score =  181 bits (458), Expect = 3e-43
 Identities = 110/257 (42%), Positives = 155/257 (60%), Gaps = 8/257 (3%)
 Frame = -2

Query: 930 PNESL--TFDQMSKCFNMPIADAAANLGVCSSLLKKLCRDNGLVRWPYRKFLAGKTVEEI 757
           PN+S   +++ +SK F++P++DAA NLGVC S+LKK+CRDNGL RWPYRK+LAGK++E+I
Sbjct: 9   PNQSKPPSWEAISKHFSLPLSDAANNLGVCVSVLKKICRDNGLDRWPYRKYLAGKSIEDI 68

Query: 756 QKDAAREKKREMIELARAARQKD-XXXXXXXXXXTIFQHQGNSVSQDGLTNDMPHASLLR 580
           ++ AAREK + + +LA+AA +                Q QG      G  +      L +
Sbjct: 69  RRYAAREKIKAIADLAKAANKSGIQQQNNENSKPHKLQQQGTKDVLVGRQHITLTPGLAK 128

Query: 579 NIACLDEFKQGFPTTGLATVTMRWWGGRGSDGNE--DEIFGEEPAVDEVSKQQLHDLADN 406
            +  LDEFK GFP+ GL+T T +WWG   SD     D    E    D    ++  D   +
Sbjct: 129 GLMGLDEFKYGFPSDGLSTATNKWWGSSLSDTQRATDRAGIETDEDDGRQSEEKVDAGTS 188

Query: 405 DVEFIEEKTD---PLANKIDMGPQGTALLSSVRKAATAEGREALKLGVFGDHGLFKPDRQ 235
            V   EEK +     +N+ID  PQGT LL+SVRK A  EGREALKLGV+  +G+ K  R+
Sbjct: 189 VVIVDEEKGENGKMESNEID--PQGTGLLTSVRKRAAEEGREALKLGVYRTYGVNKLGRK 246

Query: 234 EKLMLLKVFKSSMSCQW 184
           ++ +LL++F SS+  QW
Sbjct: 247 QRALLLRIFGSSLPKQW 263


>dbj|BAK02178.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 343

 Score =  132 bits (331), Expect = 2e-28
 Identities = 86/276 (31%), Positives = 155/276 (56%), Gaps = 25/276 (9%)
 Frame = -2

Query: 933 PPNESLTFDQMSKCFNMPIADAAANLGVCSSLLKKLCRDNGLVRWPYRKFLAGKTVEEIQ 754
           P   SL+++++SK F++PIA+AA+ LGVC+S+LK++CR +G+VRWPYRK ++GK   +  
Sbjct: 81  PTRVSLSYEEISKLFSLPIAEAASILGVCTSVLKRICRTHGIVRWPYRKIVSGK--GDDV 138

Query: 753 KDAAREKKREMIELARAARQKD-XXXXXXXXXXTIFQ-----HQGN-------------S 631
           K+A REK  +++EL++ A+QK              FQ      QG+             S
Sbjct: 139 KNAEREKAMQLLELSKIAKQKAISSSGSLTTSSGAFQAVSKAQQGSAKAGSAIGRQNVPS 198

Query: 630 VSQDGLTNDMPHASLLRNIACLDEFKQGFPTTGLATVTMRWWGGRGSDGNEDEIFGEEPA 451
           +SQ     D+P          +D+FK GFP++GL+T TM+WW    +D + + +  ++  
Sbjct: 199 LSQFSQAKDIP--------TYMDDFKYGFPSSGLSTETMKWW---ATDSHTETVAVKDDN 247

Query: 450 VD--EVSKQQLHDLADNDVEFIEEKTDPLANKIDMGPQGTALLSSVRKAATAEGREALKL 277
            +  E + +    + D+++++  ++ +  A+ +D     +A L S+R+ A  +GR  L  
Sbjct: 248 REGSESTNEASKGMTDDELDWGADEPEADADGMDAATDPSAQLCSLRRKAAGDGRRLLN- 306

Query: 276 GVFGDHG----LFKPDRQEKLMLLKVFKSSMSCQWK 181
              GD G    L + ++++K++L +VF +S+  QW+
Sbjct: 307 ---GDTGRVQQLCRLNKRQKIVLAQVFGASLPEQWR 339


>emb|CAN71458.1| hypothetical protein VITISV_007604 [Vitis vinifera]
          Length = 302

 Score =  131 bits (329), Expect = 3e-28
 Identities = 71/161 (44%), Positives = 99/161 (61%), Gaps = 4/161 (2%)
 Frame = -2

Query: 654 IFQHQGNSVSQDGLTNDMPHASLLRNIAC-LDEFKQGFPTTGLATVTMRWWGGRGSDGNE 478
           + Q QG+   Q+G   ++P+ASL + IA  LDEFK GFPT+GLAT + +WWG    DG E
Sbjct: 138 MLQQQGSRNIQNGRPQNLPNASLSKGIAASLDEFKYGFPTSGLATASNKWWGSSSPDGYE 197

Query: 477 DEIFGEEPAVDEVSKQQLHDLADNDVEFIE---EKTDPLANKIDMGPQGTALLSSVRKAA 307
             I G    +DE  K+Q   LADN    +    EK +    +  +GPQGT LL++VRK  
Sbjct: 198 GTI-GNGVEIDEEDKKQSEQLADNGANLLVMDGEKAENEKEEGTIGPQGTGLLTAVRKTT 256

Query: 306 TAEGREALKLGVFGDHGLFKPDRQEKLMLLKVFKSSMSCQW 184
             EGR+ LK+GV  DHG+ K  ++E+ +LL++F SS+  QW
Sbjct: 257 VEEGRKILKIGVGRDHGVLKAGKKERRLLLQIFGSSLPSQW 297


Top