BLASTX nr result

ID: Coptis21_contig00015904 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00015904
         (254 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002536881.1| conserved hypothetical protein [Ricinus comm...    76   1e-13
ref|XP_003545406.1| PREDICTED: uncharacterized protein LOC100808...    79   3e-13
ref|XP_003518487.1| PREDICTED: uncharacterized protein LOC100776...    79   3e-13
ref|XP_002275834.1| PREDICTED: uncharacterized protein LOC100261...    76   5e-13
emb|CBI24236.3| unnamed protein product [Vitis vinifera]               76   5e-13

>ref|XP_002536881.1| conserved hypothetical protein [Ricinus communis]
           gi|223518254|gb|EEF25502.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 202

 Score = 75.9 bits (185), Expect(2) = 1e-13
 Identities = 32/45 (71%), Positives = 42/45 (93%)
 Frame = +3

Query: 120 SVKLIFYEGTTKILTGKNIAGEVMFQFPNMVVCHADSFYIGQPIP 254
           SVKLIF+EGTT+ILTG++IAGE+MF+ P+ +VCHADSF+IG P+P
Sbjct: 16  SVKLIFFEGTTRILTGRHIAGEIMFENPDKMVCHADSFFIGHPLP 60



 Score = 25.0 bits (53), Expect(2) = 1e-13
 Identities = 14/24 (58%), Positives = 16/24 (66%)
 Frame = +2

Query: 68  MGNAISPCCQPKVLRSSISEVNLL 139
           MGNAISPC Q    +SS S V L+
Sbjct: 1   MGNAISPCFQ----QSSRSSVKLI 20


>ref|XP_003545406.1| PREDICTED: uncharacterized protein LOC100808831 [Glycine max]
          Length = 219

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 34/46 (73%), Positives = 43/46 (93%)
 Frame = +3

Query: 117 RSVKLIFYEGTTKILTGKNIAGEVMFQFPNMVVCHADSFYIGQPIP 254
           +SVKLIF+EGT++ L GK+IAGE+MF+FP M+VCHADSF+IGQPIP
Sbjct: 21  KSVKLIFWEGTSRSLKGKHIAGEIMFEFPEMMVCHADSFFIGQPIP 66


>ref|XP_003518487.1| PREDICTED: uncharacterized protein LOC100776840 [Glycine max]
          Length = 220

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 34/46 (73%), Positives = 43/46 (93%)
 Frame = +3

Query: 117 RSVKLIFYEGTTKILTGKNIAGEVMFQFPNMVVCHADSFYIGQPIP 254
           +SVKLIF+EGT++ L GK+IAGE+MF+FP M+VCHADSF+IGQPIP
Sbjct: 21  KSVKLIFWEGTSRSLKGKHIAGEIMFEFPEMMVCHADSFFIGQPIP 66


>ref|XP_002275834.1| PREDICTED: uncharacterized protein LOC100261894 [Vitis vinifera]
          Length = 220

 Score = 76.3 bits (186), Expect(2) = 5e-13
 Identities = 31/45 (68%), Positives = 43/45 (95%)
 Frame = +3

Query: 120 SVKLIFYEGTTKILTGKNIAGEVMFQFPNMVVCHADSFYIGQPIP 254
           SVKL+F+EGTT+ILTGK++AGE+MF+FP+ +VCHADSF+IG+ +P
Sbjct: 16  SVKLVFWEGTTRILTGKHLAGEIMFEFPDRMVCHADSFFIGRVVP 60



 Score = 22.7 bits (47), Expect(2) = 5e-13
 Identities = 12/24 (50%), Positives = 16/24 (66%)
 Frame = +2

Query: 68  MGNAISPCCQPKVLRSSISEVNLL 139
           MGNA+SPC +    +SS S V L+
Sbjct: 1   MGNAVSPCFK----QSSKSSVKLV 20


>emb|CBI24236.3| unnamed protein product [Vitis vinifera]
          Length = 202

 Score = 76.3 bits (186), Expect(2) = 5e-13
 Identities = 31/45 (68%), Positives = 43/45 (95%)
 Frame = +3

Query: 120 SVKLIFYEGTTKILTGKNIAGEVMFQFPNMVVCHADSFYIGQPIP 254
           SVKL+F+EGTT+ILTGK++AGE+MF+FP+ +VCHADSF+IG+ +P
Sbjct: 16  SVKLVFWEGTTRILTGKHLAGEIMFEFPDRMVCHADSFFIGRVVP 60



 Score = 22.7 bits (47), Expect(2) = 5e-13
 Identities = 12/24 (50%), Positives = 16/24 (66%)
 Frame = +2

Query: 68  MGNAISPCCQPKVLRSSISEVNLL 139
           MGNA+SPC +    +SS S V L+
Sbjct: 1   MGNAVSPCFK----QSSKSSVKLV 20


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