BLASTX nr result

ID: Coptis21_contig00015894 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00015894
         (713 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002312283.1| magnesium transporter [Populus trichocarpa] ...   189   5e-46
ref|XP_002274070.1| PREDICTED: magnesium transporter MRS2-5 [Vit...   187   1e-45
ref|XP_002512073.1| RNA splicing protein mrs2, mitochondrial, pu...   174   2e-41
ref|XP_002315002.1| magnesium transporter [Populus trichocarpa] ...   172   5e-41
ref|XP_004168667.1| PREDICTED: magnesium transporter MRS2-5-like...   170   3e-40

>ref|XP_002312283.1| magnesium transporter [Populus trichocarpa]
           gi|222852103|gb|EEE89650.1| magnesium transporter
           [Populus trichocarpa]
          Length = 419

 Score =  189 bits (480), Expect = 5e-46
 Identities = 101/149 (67%), Positives = 120/149 (80%), Gaps = 5/149 (3%)
 Frame = -2

Query: 433 MEEVRVLFPPSN-PEPSSSH--VRFDTNTRGNSLSQVFGFSNVKKRGHG--SRSWIHIDK 269
           MEE + L  P+  PEP+SSH  VR + +  GN  S   GF  +KKRGHG  +RSWI ID+
Sbjct: 1   MEEFQGLHVPAGVPEPASSHGNVRLNLDGYGNRGS---GFPGLKKRGHGHGNRSWIKIDQ 57

Query: 268 NGISKVLELDKGTLMRDCSLPARDLRLLDPMFIYPSTILGREKAIVINLEQIRCIITADD 89
           +G SK+LELDK T+MR CSLP+RDLRLLDP+FIYPSTILGREKAIV++LEQIRCIITAD+
Sbjct: 58  DGNSKILELDKATIMRHCSLPSRDLRLLDPLFIYPSTILGREKAIVVSLEQIRCIITADE 117

Query: 88  VILMNSLDGCVLQYESELCKRLQAKRDQS 2
           VILMNSLDGCV+QY SE CKRLQ  R+Q+
Sbjct: 118 VILMNSLDGCVVQYMSEFCKRLQTNREQA 146


>ref|XP_002274070.1| PREDICTED: magnesium transporter MRS2-5 [Vitis vinifera]
          Length = 421

 Score =  187 bits (476), Expect = 1e-45
 Identities = 98/138 (71%), Positives = 111/138 (80%), Gaps = 2/138 (1%)
 Frame = -2

Query: 409 PPSNPEPSSSH--VRFDTNTRGNSLSQVFGFSNVKKRGHGSRSWIHIDKNGISKVLELDK 236
           P S    +SSH  VR + +    +L Q  GF   KKRGHGSRSWI ID+NG SK LELDK
Sbjct: 10  PNSINTSASSHNIVRCNADGHAINLFQGPGFPGRKKRGHGSRSWIEIDQNGNSKTLELDK 69

Query: 235 GTLMRDCSLPARDLRLLDPMFIYPSTILGREKAIVINLEQIRCIITADDVILMNSLDGCV 56
             LMR CSLPARDLRLLDP+FIYPSTILGREKAIV+NLEQIRCIITA++VILMNSLDGCV
Sbjct: 70  AALMRYCSLPARDLRLLDPLFIYPSTILGREKAIVVNLEQIRCIITAEEVILMNSLDGCV 129

Query: 55  LQYESELCKRLQAKRDQS 2
           +QY+SELCKRLQ  +DQ+
Sbjct: 130 VQYKSELCKRLQNNKDQA 147


>ref|XP_002512073.1| RNA splicing protein mrs2, mitochondrial, putative [Ricinus
           communis] gi|223549253|gb|EEF50742.1| RNA splicing
           protein mrs2, mitochondrial, putative [Ricinus communis]
          Length = 460

 Score =  174 bits (441), Expect = 2e-41
 Identities = 94/147 (63%), Positives = 112/147 (76%), Gaps = 3/147 (2%)
 Frame = -2

Query: 433 MEEVRVLFPPSN-PEPSSSHVRFDTNTRGNSLSQVFGFSNVKKRGHG--SRSWIHIDKNG 263
           MEE R    PS+ P+ +  H     N+ G   +   G   +KKRGHG  SRSWI ID+NG
Sbjct: 1   MEESRGRRLPSDLPDSAFFHNARRLNSDGYG-NHGTGLPGLKKRGHGHGSRSWIKIDQNG 59

Query: 262 ISKVLELDKGTLMRDCSLPARDLRLLDPMFIYPSTILGREKAIVINLEQIRCIITADDVI 83
             ++LELDK T+MR CSLPARDLRLLDP+FIYPSTILGREKAIV++LEQIRCIITA++VI
Sbjct: 60  DLEILELDKATIMRHCSLPARDLRLLDPLFIYPSTILGREKAIVVSLEQIRCIITAEEVI 119

Query: 82  LMNSLDGCVLQYESELCKRLQAKRDQS 2
           LM SLDGCV+Q+ESE CKRLQ  +DQS
Sbjct: 120 LMKSLDGCVIQFESEFCKRLQTNKDQS 146


>ref|XP_002315002.1| magnesium transporter [Populus trichocarpa]
           gi|222864042|gb|EEF01173.1| magnesium transporter
           [Populus trichocarpa]
          Length = 419

 Score =  172 bits (437), Expect = 5e-41
 Identities = 95/149 (63%), Positives = 115/149 (77%), Gaps = 5/149 (3%)
 Frame = -2

Query: 433 MEEVRVLFPPSN-PEPSSS--HVRFDTNTRGNSLSQVFGFSNVKKRGH--GSRSWIHIDK 269
           ME  R   PP+  PEP+ S  + R + +  GN  S    F  +KKRGH  G+RSWI ID+
Sbjct: 1   MEGFRGPHPPAGVPEPAVSLCNGRLNLDGYGNRGSS---FPGLKKRGHALGNRSWIKIDQ 57

Query: 268 NGISKVLELDKGTLMRDCSLPARDLRLLDPMFIYPSTILGREKAIVINLEQIRCIITADD 89
           +G SK+LELDK T+MR CSLP+RDLRLLDP+FIYPSTILGREKAIV++LEQIRCIITAD+
Sbjct: 58  DGNSKILELDKVTIMRHCSLPSRDLRLLDPLFIYPSTILGREKAIVVSLEQIRCIITADE 117

Query: 88  VILMNSLDGCVLQYESELCKRLQAKRDQS 2
           VILMNSLD CV++Y SE CKRLQ  R+Q+
Sbjct: 118 VILMNSLDVCVVRYMSEFCKRLQTNREQA 146


>ref|XP_004168667.1| PREDICTED: magnesium transporter MRS2-5-like [Cucumis sativus]
          Length = 380

 Score =  170 bits (430), Expect = 3e-40
 Identities = 79/105 (75%), Positives = 95/105 (90%)
 Frame = -2

Query: 316 VKKRGHGSRSWIHIDKNGISKVLELDKGTLMRDCSLPARDLRLLDPMFIYPSTILGREKA 137
           VKKRGHG+RSWI ID+ G S+VLEL+K T+MR CSLP+RD+RLLDP+F+ PSTILGREKA
Sbjct: 7   VKKRGHGNRSWIKIDQEGNSEVLELEKATIMRHCSLPSRDMRLLDPLFLCPSTILGREKA 66

Query: 136 IVINLEQIRCIITADDVILMNSLDGCVLQYESELCKRLQAKRDQS 2
           IV++LEQIRC+IT+D+V LMNSLDGC  QY+SELCKRLQA +DQS
Sbjct: 67  IVVSLEQIRCVITSDEVFLMNSLDGCAAQYKSELCKRLQANKDQS 111


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