BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00015892
         (703 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280012.1| PREDICTED: 40S ribosomal protein S13 [Vitis ...   215   1e-63
gb|ABK23173.1| unknown [Picea sitchensis]                             214   2e-63
ref|XP_002875045.1| ATRPS13A [Arabidopsis lyrata subsp. lyrata] ...   214   2e-63
ref|XP_002511695.1| 40S ribosomal protein S13, putative [Ricinus...   214   3e-63
ref|NP_001237229.1| 40S ribosomal protein S13 [Glycine max] gi|3...   213   6e-63

>ref|XP_002280012.1| PREDICTED: 40S ribosomal protein S13 [Vitis vinifera]
           gi|147820740|emb|CAN69640.1| hypothetical protein
           VITISV_028568 [Vitis vinifera]
           gi|296089171|emb|CBI38874.3| unnamed protein product
           [Vitis vinifera]
          Length = 151

 Score =  215 bits (547), Expect(2) = 1e-63
 Identities = 106/120 (88%), Positives = 114/120 (95%)
 Frame = -1

Query: 643 IGRIHSRGKGISSSALPYKRTPPSWLKTSSQDVDESFCKFAKKGLTPSQIGVLLRDSHGI 464
           +GR+HSRGKGISSSALPYKRTPPSWLK SSQDV+E+ CKFAKKG+TPSQIGV+LRDSHGI
Sbjct: 1   MGRMHSRGKGISSSALPYKRTPPSWLKISSQDVEENICKFAKKGMTPSQIGVILRDSHGI 60

Query: 463 A*LKVVAGSKVLRILKAHGLAPEIPEDLYQLIKKAVAIRKHLERNRKDKDSKFRLILVES 284
           A +K V GSK+LRILKAHGLAPEIPEDLY LIKKAVAIRKHLERNRKDKDSKFRLILVES
Sbjct: 61  AQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVES 120



 Score = 54.7 bits (130), Expect(2) = 1e-63
 Identities = 25/28 (89%), Positives = 26/28 (92%)
 Frame = -2

Query: 282 RLARYYETIKKLPPVWKYESTTASTLVA 199
           RLARYY+  KKLPPVWKYESTTASTLVA
Sbjct: 124 RLARYYKRTKKLPPVWKYESTTASTLVA 151


>gb|ABK23173.1| unknown [Picea sitchensis]
          Length = 151

 Score =  214 bits (546), Expect(2) = 2e-63
 Identities = 106/120 (88%), Positives = 114/120 (95%)
 Frame = -1

Query: 643 IGRIHSRGKGISSSALPYKRTPPSWLKTSSQDVDESFCKFAKKGLTPSQIGVLLRDSHGI 464
           +GR+HSRGKGISSSALPYKRTPPSWLK SSQDV+++ CKFAKKGLTPSQIGV+LRDSHGI
Sbjct: 1   MGRMHSRGKGISSSALPYKRTPPSWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGI 60

Query: 463 A*LKVVAGSKVLRILKAHGLAPEIPEDLYQLIKKAVAIRKHLERNRKDKDSKFRLILVES 284
           A +K V GSKVLRILKAHGLAPEIPEDLY LIKKAVA+RKHLERNRKDKDSKFRLILVES
Sbjct: 61  AQVKSVTGSKVLRILKAHGLAPEIPEDLYHLIKKAVAVRKHLERNRKDKDSKFRLILVES 120



 Score = 54.3 bits (129), Expect(2) = 2e-63
 Identities = 24/28 (85%), Positives = 26/28 (92%)
 Frame = -2

Query: 282 RLARYYETIKKLPPVWKYESTTASTLVA 199
           RLARYY+ +KKLPPVWKYES TASTLVA
Sbjct: 124 RLARYYKRVKKLPPVWKYESATASTLVA 151


>ref|XP_002875045.1| ATRPS13A [Arabidopsis lyrata subsp. lyrata]
           gi|297320882|gb|EFH51304.1| ATRPS13A [Arabidopsis lyrata
           subsp. lyrata]
          Length = 151

 Score =  214 bits (545), Expect(2) = 2e-63
 Identities = 106/120 (88%), Positives = 113/120 (94%)
 Frame = -1

Query: 643 IGRIHSRGKGISSSALPYKRTPPSWLKTSSQDVDESFCKFAKKGLTPSQIGVLLRDSHGI 464
           +GR+HSRGKGIS+SALPYKR PPSWLKT+SQDVDES CKFAKKGLTPSQIGV+LRDSHGI
Sbjct: 1   MGRMHSRGKGISASALPYKRPPPSWLKTTSQDVDESICKFAKKGLTPSQIGVILRDSHGI 60

Query: 463 A*LKVVAGSKVLRILKAHGLAPEIPEDLYQLIKKAVAIRKHLERNRKDKDSKFRLILVES 284
             +K V GSK+LRILKAHGLAPEIPEDLY LIKKAVAIRKHLERNRKDKDSKFRLILVES
Sbjct: 61  PQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVES 120



 Score = 54.7 bits (130), Expect(2) = 2e-63
 Identities = 25/28 (89%), Positives = 26/28 (92%)
 Frame = -2

Query: 282 RLARYYETIKKLPPVWKYESTTASTLVA 199
           RLARYY+  KKLPPVWKYESTTASTLVA
Sbjct: 124 RLARYYKKTKKLPPVWKYESTTASTLVA 151


>ref|XP_002511695.1| 40S ribosomal protein S13, putative [Ricinus communis]
           gi|223548875|gb|EEF50364.1| 40S ribosomal protein S13,
           putative [Ricinus communis]
          Length = 151

 Score =  214 bits (544), Expect(2) = 3e-63
 Identities = 106/120 (88%), Positives = 113/120 (94%)
 Frame = -1

Query: 643 IGRIHSRGKGISSSALPYKRTPPSWLKTSSQDVDESFCKFAKKGLTPSQIGVLLRDSHGI 464
           +GR+HSRGKGIS+SALPYKRTPPSWLK SSQDVDE+ CKFAKKGL PSQIGV+LRDSHGI
Sbjct: 1   MGRMHSRGKGISASALPYKRTPPSWLKISSQDVDENICKFAKKGLRPSQIGVILRDSHGI 60

Query: 463 A*LKVVAGSKVLRILKAHGLAPEIPEDLYQLIKKAVAIRKHLERNRKDKDSKFRLILVES 284
           A +K V GSK+LRILKAHGLAPEIPEDLY LIKKAVAIRKHLERNRKDKDSKFRLILVES
Sbjct: 61  AQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVES 120



 Score = 54.7 bits (130), Expect(2) = 3e-63
 Identities = 25/28 (89%), Positives = 26/28 (92%)
 Frame = -2

Query: 282 RLARYYETIKKLPPVWKYESTTASTLVA 199
           RLARYY+  KKLPPVWKYESTTASTLVA
Sbjct: 124 RLARYYKKTKKLPPVWKYESTTASTLVA 151


>ref|NP_001237229.1| 40S ribosomal protein S13 [Glycine max]
           gi|356514135|ref|XP_003525762.1| PREDICTED: 40S
           ribosomal protein S13-like [Glycine max]
           gi|356514137|ref|XP_003525763.1| PREDICTED: 40S
           ribosomal protein S13-like [Glycine max]
           gi|356563264|ref|XP_003549884.1| PREDICTED: 40S
           ribosomal protein S13-like [Glycine max]
           gi|54039313|sp|P62302.1|RS13_SOYBN RecName: Full=40S
           ribosomal protein S13 gi|44662862|gb|AAS47510.1|
           ribosomal protein S13 [Glycine max]
           gi|161367348|gb|ABX71080.1| ribosomal protein S13
           [Glycine max] gi|255625887|gb|ACU13288.1| unknown
           [Glycine max]
          Length = 151

 Score =  213 bits (541), Expect(2) = 6e-63
 Identities = 105/120 (87%), Positives = 113/120 (94%)
 Frame = -1

Query: 643 IGRIHSRGKGISSSALPYKRTPPSWLKTSSQDVDESFCKFAKKGLTPSQIGVLLRDSHGI 464
           +GR+HSRGKGISSSALPYKRTPPSWLK SSQDV+E+ CKFAKKGLTPSQIGV+LRDSHGI
Sbjct: 1   MGRMHSRGKGISSSALPYKRTPPSWLKISSQDVEENICKFAKKGLTPSQIGVILRDSHGI 60

Query: 463 A*LKVVAGSKVLRILKAHGLAPEIPEDLYQLIKKAVAIRKHLERNRKDKDSKFRLILVES 284
           A +  V GSK+LRILKAHGLAPEIPEDLY LIKKAV+IRKHLERNRKDKDSKFRLILVES
Sbjct: 61  AQVNSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVES 120



 Score = 54.7 bits (130), Expect(2) = 6e-63
 Identities = 25/28 (89%), Positives = 26/28 (92%)
 Frame = -2

Query: 282 RLARYYETIKKLPPVWKYESTTASTLVA 199
           RLARYY+  KKLPPVWKYESTTASTLVA
Sbjct: 124 RLARYYKKTKKLPPVWKYESTTASTLVA 151