BLASTX nr result

ID: Coptis21_contig00015850 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00015850
         (1439 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278936.2| PREDICTED: adenylate isopentenyltransferase ...   293   8e-77
emb|CBI32884.3| unnamed protein product [Vitis vinifera]              288   2e-75
emb|CCA29108.1| putative MYB transcription factor [Rosa hybrid c...   265   2e-68
gb|ADN05765.1| MYB transcription factor [Glycine max]                 243   1e-61
ref|XP_003554081.1| PREDICTED: myb family transcription factor A...   243   1e-61

>ref|XP_002278936.2| PREDICTED: adenylate isopentenyltransferase 7, mitochondrial-like
            [Vitis vinifera]
          Length = 422

 Score =  293 bits (750), Expect = 8e-77
 Identities = 166/293 (56%), Positives = 191/293 (65%), Gaps = 16/293 (5%)
 Frame = -2

Query: 1123 LYNMYQARKFSTVGLVPHKAHSTEQHTNIGALVECPKHDSAPSGGNGKQRLRWTSELHDR 944
            L+NMY  +KFST  LVPHKA  +E    +GAL      +S P+GG+GKQRLRWTS+LHDR
Sbjct: 118  LFNMYHPKKFSTASLVPHKAQGSEPLATVGALGGSSVKNSNPTGGSGKQRLRWTSDLHDR 177

Query: 943  FVDAITQLGGPDRATPKGVLRVMGVPGLTIYHVKSHLQKYRLAKYLPESPAXXXXXXXXX 764
            FVDAITQLGGPDRATPKGVLRVMGVPGLTIYHVKSHLQKYRLAKYLPESPA         
Sbjct: 178  FVDAITQLGGPDRATPKGVLRVMGVPGLTIYHVKSHLQKYRLAKYLPESPADGSKDEKKG 237

Query: 763  XXXXXXSMDSAPGVQINEALRMQMEVQKXXXXXXXXXXXXXXXXEAQGKYLQKIIEEQQK 584
                  SMDSAPGVQINEALR+QMEVQK                EAQGKYLQKIIEEQQK
Sbjct: 238  SGDSGSSMDSAPGVQINEALRLQMEVQKRLHEQLEVQRQLQMRIEAQGKYLQKIIEEQQK 297

Query: 583  LGGVLKASESEQVTKDKQ--QQSPPPPNAIVDPQPPLKKQRVEDRM-------LEPIE-- 437
            LGG LKASE+  +  DKQ   QS P P+A +    P KKQ+V+D M       L+P +  
Sbjct: 298  LGGALKASEAVPLVDDKQNPSQSKPLPDASIGSSSPRKKQKVDDGMTHDCNPPLDPPKPD 357

Query: 436  -----SVGPSRTEKKSDLVGQWEGDFYSNDVVGFDFGVENEFKIGKDGEPSQR 293
                  + P + + K   + +W+ D Y ND V F F +E EFK  +DG   QR
Sbjct: 358  HGCNPPLNPPKPDPKHGFIDRWDRDMYGNDGV-FGFNLEIEFKEQEDGGSEQR 409


>emb|CBI32884.3| unnamed protein product [Vitis vinifera]
          Length = 302

 Score =  288 bits (737), Expect = 2e-75
 Identities = 164/290 (56%), Positives = 188/290 (64%), Gaps = 16/290 (5%)
 Frame = -2

Query: 1114 MYQARKFSTVGLVPHKAHSTEQHTNIGALVECPKHDSAPSGGNGKQRLRWTSELHDRFVD 935
            MY  +KFST  LVPHKA  +E    +GAL      +S P+GG+GKQRLRWTS+LHDRFVD
Sbjct: 1    MYHPKKFSTASLVPHKAQGSEPLATVGALGGSSVKNSNPTGGSGKQRLRWTSDLHDRFVD 60

Query: 934  AITQLGGPDRATPKGVLRVMGVPGLTIYHVKSHLQKYRLAKYLPESPAXXXXXXXXXXXX 755
            AITQLGGPDRATPKGVLRVMGVPGLTIYHVKSHLQKYRLAKYLPESPA            
Sbjct: 61   AITQLGGPDRATPKGVLRVMGVPGLTIYHVKSHLQKYRLAKYLPESPADGSKDEKKGSGD 120

Query: 754  XXXSMDSAPGVQINEALRMQMEVQKXXXXXXXXXXXXXXXXEAQGKYLQKIIEEQQKLGG 575
               SMDSAPGVQINEALR+QMEVQK                EAQGKYLQKIIEEQQKLGG
Sbjct: 121  SGSSMDSAPGVQINEALRLQMEVQKRLHEQLEVQRQLQMRIEAQGKYLQKIIEEQQKLGG 180

Query: 574  VLKASESEQVTKDKQ--QQSPPPPNAIVDPQPPLKKQRVEDRM-------LEPIE----- 437
             LKASE+  +  DKQ   QS P P+A +    P KKQ+V+D M       L+P +     
Sbjct: 181  ALKASEAVPLVDDKQNPSQSKPLPDASIGSSSPRKKQKVDDGMTHDCNPPLDPPKPDHGC 240

Query: 436  --SVGPSRTEKKSDLVGQWEGDFYSNDVVGFDFGVENEFKIGKDGEPSQR 293
               + P + + K   + +W+ D Y ND V F F +E EFK  +DG   QR
Sbjct: 241  NPPLNPPKPDPKHGFIDRWDRDMYGNDGV-FGFNLEIEFKEQEDGGSEQR 289


>emb|CCA29108.1| putative MYB transcription factor [Rosa hybrid cultivar]
          Length = 294

 Score =  265 bits (678), Expect = 2e-68
 Identities = 153/282 (54%), Positives = 183/282 (64%), Gaps = 8/282 (2%)
 Frame = -2

Query: 1114 MYQARKFSTVGLVPHKAHSTEQHTNIGALVECPKHDSAP-----SGGNGKQRLRWTSELH 950
            MY A+KFST  LVPHK  ++EQ  +  ++       SA      S GNGKQRLRWTS+LH
Sbjct: 1    MYHAKKFSTASLVPHKPQTSEQLASDSSVKNPTPCASASASASASAGNGKQRLRWTSDLH 60

Query: 949  DRFVDAITQLGGPDRATPKGVLRVMGVPGLTIYHVKSHLQKYRLAKYLPESPAXXXXXXX 770
            DRFVDAITQLGGPDRATPKGVLRVMGVPGLTIYHVKSHLQKYRLAKYLPESPA       
Sbjct: 61   DRFVDAITQLGGPDRATPKGVLRVMGVPGLTIYHVKSHLQKYRLAKYLPESPADGSKDEK 120

Query: 769  XXXXXXXXSMDSAPGVQINEALRMQMEVQKXXXXXXXXXXXXXXXXEAQGKYLQKIIEEQ 590
                      DS+PGVQINEALRMQMEVQK                EAQGKYLQKIIEEQ
Sbjct: 121  KGSGDSLSCSDSSPGVQINEALRMQMEVQKRLHEQLEVQRQLQMRIEAQGKYLQKIIEEQ 180

Query: 589  QKLGGVLKASESEQVTKDKQQQS--PPPPNAIVDPQPPLKKQRVEDRM-LEPIESVGPSR 419
            QKLGGVLK S++   ++DKQ+ S    P +A      P KK R++D +  +   S  P +
Sbjct: 181  QKLGGVLKGSDALPSSEDKQKLSHLETPGDASTGLSSPRKKHRMDDGLPSDCTTSDLPPK 240

Query: 418  TEKKSDLVGQWEGDFYSNDVVGFDFGVENEFKIGKDGEPSQR 293
             ++K++ VGQW+ D Y +D  GF F ++ E K  + G  +Q+
Sbjct: 241  GDQKNEFVGQWDRDMYPSD-GGFGFNLQTELKEAEGGGATQK 281


>gb|ADN05765.1| MYB transcription factor [Glycine max]
          Length = 272

 Score =  243 bits (619), Expect = 1e-61
 Identities = 145/280 (51%), Positives = 170/280 (60%), Gaps = 7/280 (2%)
 Frame = -2

Query: 1114 MYQARKFSTVGLVPHKAHS-TEQHTNIGALVECPKHDSAPSGGNGKQRLRWTSELHDRFV 938
            MY  +KFS   +VPHK+    EQ  N G L       +APSGG+GKQRLRWTS+LHDRFV
Sbjct: 1    MYHTKKFSPASMVPHKSQGGAEQLANAGVLGGSAVKTAAPSGGSGKQRLRWTSDLHDRFV 60

Query: 937  DAITQLGGPDRATPKGVLRVMGVPGLTIYHVKSHLQKYRLAKYLPESPA--XXXXXXXXX 764
            DAITQLGGPDRATPKGVLRVMGVPGLTIYHVKSHLQKYRLAKYLPESPA           
Sbjct: 61   DAITQLGGPDRATPKGVLRVMGVPGLTIYHVKSHLQKYRLAKYLPESPADGKDPKDEKRM 120

Query: 763  XXXXXXSMDSAPGVQINEALRMQMEVQKXXXXXXXXXXXXXXXXEAQGKYLQKIIEEQQK 584
                    DS+ G+ IN+ALRMQMEVQK                EAQGKYLQKIIEEQQK
Sbjct: 121  SGDSISGADSSSGMPINDALRMQMEVQKRLHEQLEVQKQLQMRIEAQGKYLQKIIEEQQK 180

Query: 583  LGGVLKASESEQVTKDK----QQQSPPPPNAIVDPQPPLKKQRVEDRMLEPIESVGPSRT 416
            LG  L  SE+  ++ DK    Q ++    +A+     PLKKQR++D   E       +  
Sbjct: 181  LGSTLTTSETLPLSHDKQNYPQSEASGSSDALASTVSPLKKQRIDDGSKEGF----TASQ 236

Query: 415  EKKSDLVGQWEGDFYSNDVVGFDFGVENEFKIGKDGEPSQ 296
             +K+D VGQ + + Y +   GFD     E K  +D E  Q
Sbjct: 237  VRKNDNVGQLDPNLYDDAGFGFDL----ETKKDEDNESGQ 272


>ref|XP_003554081.1| PREDICTED: myb family transcription factor APL-like [Glycine max]
          Length = 272

 Score =  243 bits (619), Expect = 1e-61
 Identities = 145/280 (51%), Positives = 170/280 (60%), Gaps = 7/280 (2%)
 Frame = -2

Query: 1114 MYQARKFSTVGLVPHKAHS-TEQHTNIGALVECPKHDSAPSGGNGKQRLRWTSELHDRFV 938
            MY  +KFS   +VPHK+    EQ  N G L       +APSGG+GKQRLRWTS+LHDRFV
Sbjct: 1    MYHTKKFSPASMVPHKSQGGAEQLANAGVLGGSAVKTAAPSGGSGKQRLRWTSDLHDRFV 60

Query: 937  DAITQLGGPDRATPKGVLRVMGVPGLTIYHVKSHLQKYRLAKYLPESPA--XXXXXXXXX 764
            DAITQLGGPDRATPKGVLRVMGVPGLTIYHVKSHLQKYRLAKYLPESPA           
Sbjct: 61   DAITQLGGPDRATPKGVLRVMGVPGLTIYHVKSHLQKYRLAKYLPESPADGKDPKDEKRM 120

Query: 763  XXXXXXSMDSAPGVQINEALRMQMEVQKXXXXXXXXXXXXXXXXEAQGKYLQKIIEEQQK 584
                    DS+ G+ IN+ALRMQMEVQK                EAQGKYLQKIIEEQQK
Sbjct: 121  SGDSISGADSSSGMPINDALRMQMEVQKRLHEQLEVQKQLQMRIEAQGKYLQKIIEEQQK 180

Query: 583  LGGVLKASESEQVTKDK----QQQSPPPPNAIVDPQPPLKKQRVEDRMLEPIESVGPSRT 416
            LG  L  SE+  ++ DK    Q ++    +A+     PLKKQR++D   E       +  
Sbjct: 181  LGSTLTTSETLPLSHDKQNHPQSEASGSSDALASTVSPLKKQRIDDGSKEGF----TASQ 236

Query: 415  EKKSDLVGQWEGDFYSNDVVGFDFGVENEFKIGKDGEPSQ 296
             +K+D VGQ + + Y +   GFD     E K  +D E  Q
Sbjct: 237  VRKNDNVGQLDPNLYDDAGFGFDL----ETKKDEDNESGQ 272


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