BLASTX nr result

ID: Coptis21_contig00015849 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00015849
         (433 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK34190.1| unknown [Medicago truncatula]                           67   1e-09
dbj|BAF95072.1| voltage-dependent anion channel [Nicotiana tabacum]    67   1e-09
ref|XP_004147460.1| PREDICTED: mitochondrial outer membrane prot...    67   2e-09
sp|P42054.2|VDAC_PEA RecName: Full=Outer plastidial membrane pro...    67   2e-09
ref|XP_003631280.1| PREDICTED: mitochondrial outer membrane prot...    66   3e-09

>gb|AFK34190.1| unknown [Medicago truncatula]
          Length = 278

 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 34/70 (48%), Positives = 41/70 (58%)
 Frame = -1

Query: 223 KGPSLFSDIGKKTRDLLYKDYRNGYNVSLSTEDSSGSVNTTSVTRVGRDFFAGLNMQMAE 44
           KGP L+SDIGKK RDLLYKDY      +L+T   +G   T S T+ G  F A +N Q+  
Sbjct: 3   KGPGLYSDIGKKARDLLYKDYNTDQKFTLTTYSPTGIALTASSTKKGELFLADINTQLKH 62

Query: 43  GQFIPDIKVD 14
                DIKVD
Sbjct: 63  KNVTTDIKVD 72


>dbj|BAF95072.1| voltage-dependent anion channel [Nicotiana tabacum]
          Length = 276

 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 33/73 (45%), Positives = 47/73 (64%)
 Frame = -1

Query: 223 KGPSLFSDIGKKTRDLLYKDYRNGYNVSLSTEDSSGSVNTTSVTRVGRDFFAGLNMQMAE 44
           KGP L+++IGKKTRDLLYKDY++ +  +++T   +G   T+S T+ G  F A +N Q+  
Sbjct: 3   KGPGLYTEIGKKTRDLLYKDYQSDHKFTITTYSPTGVAITSSGTKKGDLFLADVNTQLKN 62

Query: 43  GQFIPDIKVDQYS 5
                DIKVD  S
Sbjct: 63  KNITTDIKVDTNS 75


>ref|XP_004147460.1| PREDICTED: mitochondrial outer membrane protein porin of 34
           kDa-like [Cucumis sativus]
           gi|449523227|ref|XP_004168625.1| PREDICTED:
           mitochondrial outer membrane protein porin of 34
           kDa-like [Cucumis sativus]
          Length = 276

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 33/73 (45%), Positives = 46/73 (63%)
 Frame = -1

Query: 223 KGPSLFSDIGKKTRDLLYKDYRNGYNVSLSTEDSSGSVNTTSVTRVGRDFFAGLNMQMAE 44
           KGP L+SDIGK+ RDLLYKDY++ +  +++T   +G   T+S T+ G  F A +N Q+  
Sbjct: 3   KGPGLYSDIGKRARDLLYKDYQSDHKFTITTYSPTGVAITSSGTKKGDLFLADVNTQLKN 62

Query: 43  GQFIPDIKVDQYS 5
                DIKVD  S
Sbjct: 63  KNITTDIKVDTSS 75


>sp|P42054.2|VDAC_PEA RecName: Full=Outer plastidial membrane protein porin; AltName:
           Full=Voltage-dependent anion-selective channel protein;
           Short=VDAC gi|396819|emb|CAA80988.1| Porin [Pisum
           sativum]
          Length = 276

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 34/74 (45%), Positives = 44/74 (59%)
 Frame = -1

Query: 226 VKGPSLFSDIGKKTRDLLYKDYRNGYNVSLSTEDSSGSVNTTSVTRVGRDFFAGLNMQMA 47
           VKGP L++DIGKK RDLLYKDY +    ++ST   +G   T+S T+ G  F   +N Q+ 
Sbjct: 2   VKGPGLYTDIGKKARDLLYKDYHSDKKFTISTYSPTGVAITSSGTKKGELFLGDVNTQLK 61

Query: 46  EGQFIPDIKVDQYS 5
                 DIKVD  S
Sbjct: 62  NKNITTDIKVDTNS 75


>ref|XP_003631280.1| PREDICTED: mitochondrial outer membrane protein porin of 36 kDa
           isoform 2 [Vitis vinifera]
          Length = 247

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 33/73 (45%), Positives = 46/73 (63%)
 Frame = -1

Query: 223 KGPSLFSDIGKKTRDLLYKDYRNGYNVSLSTEDSSGSVNTTSVTRVGRDFFAGLNMQMAE 44
           KGP L+SDIGK  RDLLY+DY++ +  +++T  SSG   T+S T+ G  F A +N Q+  
Sbjct: 3   KGPGLYSDIGKIARDLLYRDYQSDHKFTVTTYTSSGVAITSSGTKKGELFIADVNTQLKN 62

Query: 43  GQFIPDIKVDQYS 5
                D+KVD  S
Sbjct: 63  KNITTDVKVDTNS 75


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