BLASTX nr result
ID: Coptis21_contig00015840
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00015840 (585 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002270226.1| PREDICTED: squamosa promoter-binding-like pr... 78 1e-12 ref|XP_002514891.1| conserved hypothetical protein [Ricinus comm... 76 4e-12 ref|XP_002280160.1| PREDICTED: squamosa promoter-binding-like pr... 76 4e-12 emb|CBI27679.3| unnamed protein product [Vitis vinifera] 67 3e-09 gb|ACL51016.1| squamosa promoter-binding protein [Citrus trifoli... 66 4e-09 >ref|XP_002270226.1| PREDICTED: squamosa promoter-binding-like protein 16 [Vitis vinifera] gi|147820985|emb|CAN63524.1| hypothetical protein VITISV_001644 [Vitis vinifera] Length = 389 Score = 77.8 bits (190), Expect = 1e-12 Identities = 44/110 (40%), Positives = 62/110 (56%), Gaps = 1/110 (0%) Frame = -3 Query: 580 RKMFSNGLTRVXXXXXXXXXXXSPPTQTSGINMSHLVQPDSIPIAQPLVPGLQYHCLGDY 401 +KMFS+GL RV SPP +T I +S +VQ + IP AQ L+P L Y L Y Sbjct: 279 QKMFSDGLNRVISSDRALSLLSSPPPETQEIGLSRMVQQNPIPPAQSLIPSLHYTGLSQY 338 Query: 400 HSQGIDGEPMGTVLVSD-THDSDIRCHGVFYMGANESSQNGVQQRLPFTW 254 S G +G+VLVSD + ++++ C +F +G + SS N Q L F+W Sbjct: 339 ASSQGMGGSVGSVLVSDGSSNANLHCPAIFQLGPDGSSTNSPHQTLSFSW 388 >ref|XP_002514891.1| conserved hypothetical protein [Ricinus communis] gi|223545942|gb|EEF47445.1| conserved hypothetical protein [Ricinus communis] Length = 404 Score = 76.3 bits (186), Expect = 4e-12 Identities = 43/111 (38%), Positives = 65/111 (58%), Gaps = 1/111 (0%) Frame = -3 Query: 583 SRKMFSNGLTRVXXXXXXXXXXXSPPTQTSGINMSHLVQPDSIPIAQPLVPGLQYHCLGD 404 ++KMFS+G+ +V SP +T I +SH+VQPD P AQ L+P L + L Sbjct: 299 NQKMFSDGVNQVIDSNGALSLLSSPQAETREIGLSHMVQPDLNPPAQSLIPSLNFSNL-- 356 Query: 403 YHSQGIDGEPMGTVLVSD-THDSDIRCHGVFYMGANESSQNGVQQRLPFTW 254 G++G P+ +VLVSD +H+ ++ +F G +ESS +G QRL F+W Sbjct: 357 ----GMEGGPVESVLVSDGSHNGNLHSQDMFQTGPDESSASGSHQRLSFSW 403 >ref|XP_002280160.1| PREDICTED: squamosa promoter-binding-like protein 13 [Vitis vinifera] gi|147837620|emb|CAN77059.1| hypothetical protein VITISV_022138 [Vitis vinifera] gi|297734432|emb|CBI15679.3| unnamed protein product [Vitis vinifera] Length = 377 Score = 76.3 bits (186), Expect = 4e-12 Identities = 43/109 (39%), Positives = 65/109 (59%), Gaps = 1/109 (0%) Frame = -3 Query: 577 KMFSNGLT-RVXXXXXXXXXXXSPPTQTSGINMSHLVQPDSIPIAQPLVPGLQYHCLGDY 401 KMF + LT +V SP TQ+SGI++S++VQP+S+ +AQP P L Y+ Sbjct: 279 KMFYDRLTNQVLESDCALSLLSSPQTQSSGISLSNMVQPNSVSLAQPSAPSLHYN----- 333 Query: 400 HSQGIDGEPMGTVLVSDTHDSDIRCHGVFYMGANESSQNGVQQRLPFTW 254 +P+ +VLVS+ +DI C G+F++G++ SS N Q+LPF W Sbjct: 334 ------NQPVDSVLVSNAGVTDIHCPGIFHIGSDGSSGNEAPQKLPFFW 376 >emb|CBI27679.3| unnamed protein product [Vitis vinifera] Length = 421 Score = 66.6 bits (161), Expect = 3e-09 Identities = 35/87 (40%), Positives = 51/87 (58%), Gaps = 1/87 (1%) Frame = -3 Query: 511 PPTQTSGINMSHLVQPDSIPIAQPLVPGLQYHCLGDYHSQGIDGEPMGTVLVSD-THDSD 335 PP +T I +S +VQ + IP AQ L+P L Y L Y S G +G+VLVSD + +++ Sbjct: 282 PPPETQEIGLSRMVQQNPIPPAQSLIPSLHYTGLSQYASSQGMGGSVGSVLVSDGSSNAN 341 Query: 334 IRCHGVFYMGANESSQNGVQQRLPFTW 254 + C +F +G + SS N Q L F+W Sbjct: 342 LHCPAIFQLGPDGSSTNSPHQTLSFSW 368 >gb|ACL51016.1| squamosa promoter-binding protein [Citrus trifoliata] Length = 379 Score = 66.2 bits (160), Expect = 4e-09 Identities = 32/86 (37%), Positives = 50/86 (58%) Frame = -3 Query: 511 PPTQTSGINMSHLVQPDSIPIAQPLVPGLQYHCLGDYHSQGIDGEPMGTVLVSDTHDSDI 332 P TQ+SGI++S ++ P S+P+ +PL L H + EPM +VLVS D ++ Sbjct: 303 PTTQSSGISLSQMMPPSSMPLVRPLGTSLHNHSV----------EPMESVLVSSDQDDNV 352 Query: 331 RCHGVFYMGANESSQNGVQQRLPFTW 254 C GVF++G + S+ + Q +PF W Sbjct: 353 HCPGVFHLGYDGSAASDTPQTIPFHW 378