BLASTX nr result

ID: Coptis21_contig00015840 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00015840
         (585 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270226.1| PREDICTED: squamosa promoter-binding-like pr...    78   1e-12
ref|XP_002514891.1| conserved hypothetical protein [Ricinus comm...    76   4e-12
ref|XP_002280160.1| PREDICTED: squamosa promoter-binding-like pr...    76   4e-12
emb|CBI27679.3| unnamed protein product [Vitis vinifera]               67   3e-09
gb|ACL51016.1| squamosa promoter-binding protein [Citrus trifoli...    66   4e-09

>ref|XP_002270226.1| PREDICTED: squamosa promoter-binding-like protein 16 [Vitis
           vinifera] gi|147820985|emb|CAN63524.1| hypothetical
           protein VITISV_001644 [Vitis vinifera]
          Length = 389

 Score = 77.8 bits (190), Expect = 1e-12
 Identities = 44/110 (40%), Positives = 62/110 (56%), Gaps = 1/110 (0%)
 Frame = -3

Query: 580 RKMFSNGLTRVXXXXXXXXXXXSPPTQTSGINMSHLVQPDSIPIAQPLVPGLQYHCLGDY 401
           +KMFS+GL RV           SPP +T  I +S +VQ + IP AQ L+P L Y  L  Y
Sbjct: 279 QKMFSDGLNRVISSDRALSLLSSPPPETQEIGLSRMVQQNPIPPAQSLIPSLHYTGLSQY 338

Query: 400 HSQGIDGEPMGTVLVSD-THDSDIRCHGVFYMGANESSQNGVQQRLPFTW 254
            S    G  +G+VLVSD + ++++ C  +F +G + SS N   Q L F+W
Sbjct: 339 ASSQGMGGSVGSVLVSDGSSNANLHCPAIFQLGPDGSSTNSPHQTLSFSW 388


>ref|XP_002514891.1| conserved hypothetical protein [Ricinus communis]
           gi|223545942|gb|EEF47445.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 404

 Score = 76.3 bits (186), Expect = 4e-12
 Identities = 43/111 (38%), Positives = 65/111 (58%), Gaps = 1/111 (0%)
 Frame = -3

Query: 583 SRKMFSNGLTRVXXXXXXXXXXXSPPTQTSGINMSHLVQPDSIPIAQPLVPGLQYHCLGD 404
           ++KMFS+G+ +V           SP  +T  I +SH+VQPD  P AQ L+P L +  L  
Sbjct: 299 NQKMFSDGVNQVIDSNGALSLLSSPQAETREIGLSHMVQPDLNPPAQSLIPSLNFSNL-- 356

Query: 403 YHSQGIDGEPMGTVLVSD-THDSDIRCHGVFYMGANESSQNGVQQRLPFTW 254
               G++G P+ +VLVSD +H+ ++    +F  G +ESS +G  QRL F+W
Sbjct: 357 ----GMEGGPVESVLVSDGSHNGNLHSQDMFQTGPDESSASGSHQRLSFSW 403


>ref|XP_002280160.1| PREDICTED: squamosa promoter-binding-like protein 13 [Vitis
           vinifera] gi|147837620|emb|CAN77059.1| hypothetical
           protein VITISV_022138 [Vitis vinifera]
           gi|297734432|emb|CBI15679.3| unnamed protein product
           [Vitis vinifera]
          Length = 377

 Score = 76.3 bits (186), Expect = 4e-12
 Identities = 43/109 (39%), Positives = 65/109 (59%), Gaps = 1/109 (0%)
 Frame = -3

Query: 577 KMFSNGLT-RVXXXXXXXXXXXSPPTQTSGINMSHLVQPDSIPIAQPLVPGLQYHCLGDY 401
           KMF + LT +V           SP TQ+SGI++S++VQP+S+ +AQP  P L Y+     
Sbjct: 279 KMFYDRLTNQVLESDCALSLLSSPQTQSSGISLSNMVQPNSVSLAQPSAPSLHYN----- 333

Query: 400 HSQGIDGEPMGTVLVSDTHDSDIRCHGVFYMGANESSQNGVQQRLPFTW 254
                  +P+ +VLVS+   +DI C G+F++G++ SS N   Q+LPF W
Sbjct: 334 ------NQPVDSVLVSNAGVTDIHCPGIFHIGSDGSSGNEAPQKLPFFW 376


>emb|CBI27679.3| unnamed protein product [Vitis vinifera]
          Length = 421

 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 35/87 (40%), Positives = 51/87 (58%), Gaps = 1/87 (1%)
 Frame = -3

Query: 511 PPTQTSGINMSHLVQPDSIPIAQPLVPGLQYHCLGDYHSQGIDGEPMGTVLVSD-THDSD 335
           PP +T  I +S +VQ + IP AQ L+P L Y  L  Y S    G  +G+VLVSD + +++
Sbjct: 282 PPPETQEIGLSRMVQQNPIPPAQSLIPSLHYTGLSQYASSQGMGGSVGSVLVSDGSSNAN 341

Query: 334 IRCHGVFYMGANESSQNGVQQRLPFTW 254
           + C  +F +G + SS N   Q L F+W
Sbjct: 342 LHCPAIFQLGPDGSSTNSPHQTLSFSW 368


>gb|ACL51016.1| squamosa promoter-binding protein [Citrus trifoliata]
          Length = 379

 Score = 66.2 bits (160), Expect = 4e-09
 Identities = 32/86 (37%), Positives = 50/86 (58%)
 Frame = -3

Query: 511 PPTQTSGINMSHLVQPDSIPIAQPLVPGLQYHCLGDYHSQGIDGEPMGTVLVSDTHDSDI 332
           P TQ+SGI++S ++ P S+P+ +PL   L  H +          EPM +VLVS   D ++
Sbjct: 303 PTTQSSGISLSQMMPPSSMPLVRPLGTSLHNHSV----------EPMESVLVSSDQDDNV 352

Query: 331 RCHGVFYMGANESSQNGVQQRLPFTW 254
            C GVF++G + S+ +   Q +PF W
Sbjct: 353 HCPGVFHLGYDGSAASDTPQTIPFHW 378


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