BLASTX nr result

ID: Coptis21_contig00015837 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00015837
         (1371 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI29251.3| unnamed protein product [Vitis vinifera]              171   3e-80
ref|XP_002511098.1| gcn4-complementing protein, putative [Ricinu...   162   5e-75
emb|CBI15750.3| unnamed protein product [Vitis vinifera]              149   3e-71
ref|XP_002280846.2| PREDICTED: ADP-ribosylation factor GTPase-ac...   149   3e-71
ref|XP_002299350.1| predicted protein [Populus trichocarpa] gi|2...   166   3e-70

>emb|CBI29251.3| unnamed protein product [Vitis vinifera]
          Length = 832

 Score =  171 bits (434), Expect(2) = 3e-80
 Identities = 90/128 (70%), Positives = 105/128 (82%), Gaps = 2/128 (1%)
 Frame = +1

Query: 1   GVHRNLGVHISKVRSLTLDVRVWDLSVITLFQSLGNTYANSVWEELLHSRSAFQSSGV-- 174
           GVHRNLGVHISKVRSLTLDV+VW+ SV+TLFQSLGNT+ANSVWEELL SR+AFQ   V  
Sbjct: 540 GVHRNLGVHISKVRSLTLDVKVWEPSVLTLFQSLGNTFANSVWEELLQSRNAFQVDLVPT 599

Query: 175 SFTKSTKHQQLPMSKPSHSEPISIKEKFIHAKYAEKLFVRKPKGQHHSFSVSQQMQNSVR 354
              KS K Q   +SKPSH++ ISIKEK+IHAKYAEKLFVRKPK   +   V+QQ+ ++VR
Sbjct: 600 GLYKSDKPQLHFISKPSHADSISIKEKYIHAKYAEKLFVRKPKDNQYPCLVTQQIWDAVR 659

Query: 355 SNDKKAVY 378
           +NDKKAVY
Sbjct: 660 TNDKKAVY 667



 Score =  155 bits (391), Expect(2) = 3e-80
 Identities = 85/177 (48%), Positives = 115/177 (64%), Gaps = 3/177 (1%)
 Frame = +3

Query: 444  DKKAVYRHIVCSGANVNAVNKRMXXXXXXXXXXXX---NEPSLDRNSSCLEEDSSEKTSP 614
            DKKAVYR+IV S A+VN V ++                 + +LD +S CL  DS +K+S 
Sbjct: 662  DKKAVYRYIVNSEADVNVVYEQTLCNSSLTLAKVMLLQEQTNLDHSSRCLTGDSFDKSSV 721

Query: 615  DKXXXXXXXXXXXXXEDRNVEESFEGRSLLQIACETADVGMIELLLQYGANINATDSRGQ 794
                            +    E F+G SLL +ACETAD+GM+ELLLQYGANINA DSRGQ
Sbjct: 722  SSSNAAST-------SEGQTMEDFDGWSLLHLACETADIGMLELLLQYGANINACDSRGQ 774

Query: 795  TALHHCVIRGKSVFAKLLLTRGANPQAVDREGRTPLQHAAKSSLNDSELLSMLADTN 965
              LH C++RGK+ FAKLLLTRGA+P+AV+ EG+TP + A +S+  DS++L++L+D+N
Sbjct: 775  MPLHRCILRGKATFAKLLLTRGADPRAVNGEGKTPFELAVESNFVDSDVLALLSDSN 831


>ref|XP_002511098.1| gcn4-complementing protein, putative [Ricinus communis]
           gi|223550213|gb|EEF51700.1| gcn4-complementing protein,
           putative [Ricinus communis]
          Length = 818

 Score =  162 bits (410), Expect(2) = 5e-75
 Identities = 79/128 (61%), Positives = 101/128 (78%), Gaps = 2/128 (1%)
 Frame = +1

Query: 1   GVHRNLGVHISKVRSLTLDVRVWDLSVITLFQSLGNTYANSVWEELLHSRSAFQSSGVS- 177
           GVHRNLGVHISKVRSLTLDV+VW+ SV+ LFQSLGN YANSVWEELL SR++F +  ++ 
Sbjct: 541 GVHRNLGVHISKVRSLTLDVKVWEPSVLNLFQSLGNIYANSVWEELLQSRTSFTADDMAK 600

Query: 178 -FTKSTKHQQLPMSKPSHSEPISIKEKFIHAKYAEKLFVRKPKGQHHSFSVSQQMQNSVR 354
            F+KS + +   + KPSH +PI++KE+FIHAKYAEK+F+ K K   H   V++Q+  SV 
Sbjct: 601 GFSKSDRQKLFHIRKPSHDDPIAVKEQFIHAKYAEKIFIHKIKDDQHLLPVAEQVWESVY 660

Query: 355 SNDKKAVY 378
           +NDKKAVY
Sbjct: 661 ANDKKAVY 668



 Score =  147 bits (370), Expect(2) = 5e-75
 Identities = 83/174 (47%), Positives = 109/174 (62%), Gaps = 3/174 (1%)
 Frame = +3

Query: 444  DKKAVYRHIVCSGANVNAVNKRMXXXXXXXXXXXXN---EPSLDRNSSCLEEDSSEKTSP 614
            DKKAVYRHIVCSGA+VNA++ +                 + +LD N  CL+  +      
Sbjct: 663  DKKAVYRHIVCSGADVNAIHGQASFSTSSSLTSVIQYKQQENLDLNFDCLQSLNKN---- 718

Query: 615  DKXXXXXXXXXXXXXEDRNVEESFEGRSLLQIACETADVGMIELLLQYGANINATDSRGQ 794
                           ED+ + +  +G SLL +AC TAD+GM+ELLLQYGANINA++S+GQ
Sbjct: 719  ---------------EDQLITDFADGCSLLHLACLTADIGMVELLLQYGANINASNSKGQ 763

Query: 795  TALHHCVIRGKSVFAKLLLTRGANPQAVDREGRTPLQHAAKSSLNDSELLSMLA 956
            T LH C+I  +S  AKLLL RGA+PQAVDR G T LQ  ++S+LNDSEL+ +LA
Sbjct: 764  TPLHQCIINKRSAMAKLLLMRGADPQAVDRIGNTALQLLSESALNDSELVILLA 817


>emb|CBI15750.3| unnamed protein product [Vitis vinifera]
          Length = 827

 Score =  149 bits (376), Expect(2) = 3e-71
 Identities = 81/178 (45%), Positives = 114/178 (64%), Gaps = 3/178 (1%)
 Frame = +3

Query: 444  DKKAVYRHIVCSGANVNAVNKRMXXXXXXXXXXXXN---EPSLDRNSSCLEEDSSEKTSP 614
            D KAVYR+IV S  +VNA++ +                 + S+D     L + S  K S 
Sbjct: 656  DTKAVYRNIVSSEVDVNAIHGKASSNTFLTLAEVMKLQEQVSVDNKFDFLVDSSLGKASS 715

Query: 615  DKXXXXXXXXXXXXXEDRNVEESFEGRSLLQIACETADVGMIELLLQYGANINATDSRGQ 794
                           ED+++E   +G SLL +AC+ AD+GM+ELLLQYGA+INA+DS GQ
Sbjct: 716  SSSDKPSTT------EDQSMEGCHDGCSLLHLACQAADIGMVELLLQYGADINASDSMGQ 769

Query: 795  TALHHCVIRGKSVFAKLLLTRGANPQAVDREGRTPLQHAAKSSLNDSELLSMLADTNR 968
            T LHHC+IRG++  AK+LL RGA+PQAVD+EG+TPL+  A+S+++DSE+L++L  TNR
Sbjct: 770  TPLHHCIIRGRTAIAKILLKRGADPQAVDKEGKTPLRLVAESTIDDSEVLALLKQTNR 827



 Score =  147 bits (371), Expect(2) = 3e-71
 Identities = 76/126 (60%), Positives = 91/126 (72%)
 Frame = +1

Query: 1   GVHRNLGVHISKVRSLTLDVRVWDLSVITLFQSLGNTYANSVWEELLHSRSAFQSSGVSF 180
           G+HRNLGVHISKVRSL LDV+VW+ SV+TLF +LGN YANS+WE+LL+       + V  
Sbjct: 540 GIHRNLGVHISKVRSLVLDVKVWEPSVLTLFLALGNNYANSIWEDLLNP----DDTPVDS 595

Query: 181 TKSTKHQQLPMSKPSHSEPISIKEKFIHAKYAEKLFVRKPKGQHHSFSVSQQMQNSVRSN 360
             S K +   MSKP H +PIS+KE FIHAKYAEK FVRK K   H  S++Q+M  SVR N
Sbjct: 596 PTSDKSKLSLMSKPGHDDPISVKEIFIHAKYAEKRFVRKIKDSQHLHSIAQKMCRSVRYN 655

Query: 361 DKKAVY 378
           D KAVY
Sbjct: 656 DTKAVY 661


>ref|XP_002280846.2| PREDICTED: ADP-ribosylation factor GTPase-activating protein
            AGD3-like [Vitis vinifera]
          Length = 822

 Score =  149 bits (376), Expect(2) = 3e-71
 Identities = 81/178 (45%), Positives = 114/178 (64%), Gaps = 3/178 (1%)
 Frame = +3

Query: 444  DKKAVYRHIVCSGANVNAVNKRMXXXXXXXXXXXXN---EPSLDRNSSCLEEDSSEKTSP 614
            D KAVYR+IV S  +VNA++ +                 + S+D     L + S  K S 
Sbjct: 651  DTKAVYRNIVSSEVDVNAIHGKASSNTFLTLAEVMKLQEQVSVDNKFDFLVDSSLGKASS 710

Query: 615  DKXXXXXXXXXXXXXEDRNVEESFEGRSLLQIACETADVGMIELLLQYGANINATDSRGQ 794
                           ED+++E   +G SLL +AC+ AD+GM+ELLLQYGA+INA+DS GQ
Sbjct: 711  SSSDKPSTT------EDQSMEGCHDGCSLLHLACQAADIGMVELLLQYGADINASDSMGQ 764

Query: 795  TALHHCVIRGKSVFAKLLLTRGANPQAVDREGRTPLQHAAKSSLNDSELLSMLADTNR 968
            T LHHC+IRG++  AK+LL RGA+PQAVD+EG+TPL+  A+S+++DSE+L++L  TNR
Sbjct: 765  TPLHHCIIRGRTAIAKILLKRGADPQAVDKEGKTPLRLVAESTIDDSEVLALLKQTNR 822



 Score =  147 bits (371), Expect(2) = 3e-71
 Identities = 76/126 (60%), Positives = 91/126 (72%)
 Frame = +1

Query: 1   GVHRNLGVHISKVRSLTLDVRVWDLSVITLFQSLGNTYANSVWEELLHSRSAFQSSGVSF 180
           G+HRNLGVHISKVRSL LDV+VW+ SV+TLF +LGN YANS+WE+LL+       + V  
Sbjct: 535 GIHRNLGVHISKVRSLVLDVKVWEPSVLTLFLALGNNYANSIWEDLLNP----DDTPVDS 590

Query: 181 TKSTKHQQLPMSKPSHSEPISIKEKFIHAKYAEKLFVRKPKGQHHSFSVSQQMQNSVRSN 360
             S K +   MSKP H +PIS+KE FIHAKYAEK FVRK K   H  S++Q+M  SVR N
Sbjct: 591 PTSDKSKLSLMSKPGHDDPISVKEIFIHAKYAEKRFVRKIKDSQHLHSIAQKMCRSVRYN 650

Query: 361 DKKAVY 378
           D KAVY
Sbjct: 651 DTKAVY 656


>ref|XP_002299350.1| predicted protein [Populus trichocarpa] gi|222846608|gb|EEE84155.1|
           predicted protein [Populus trichocarpa]
          Length = 840

 Score =  166 bits (419), Expect(2) = 3e-70
 Identities = 89/129 (68%), Positives = 106/129 (82%), Gaps = 3/129 (2%)
 Frame = +1

Query: 1   GVHRNLGVHISKVRSLTLDVRVWDLSVITLFQSLGNTYANSVWEELLHSRSAFQSSGV-- 174
           GVHRNLGVHISKVRSLTLDV+VW+ SVI+LFQSLGN +ANSVWEELL SRSA Q+  +  
Sbjct: 547 GVHRNLGVHISKVRSLTLDVKVWEPSVISLFQSLGNAFANSVWEELLQSRSALQAELIPS 606

Query: 175 -SFTKSTKHQQLPMSKPSHSEPISIKEKFIHAKYAEKLFVRKPKGQHHSFSVSQQMQNSV 351
            SF KS K Q L +SKP+ ++ ISIKEKFIHAKYAEK FVRKP+   ++ SV+QQ+  +V
Sbjct: 607 GSF-KSDKPQLLFISKPNPADSISIKEKFIHAKYAEKAFVRKPRDHQNTRSVAQQIWEAV 665

Query: 352 RSNDKKAVY 378
           R+NDKKAVY
Sbjct: 666 RANDKKAVY 674



 Score =  127 bits (320), Expect(2) = 3e-70
 Identities = 74/174 (42%), Positives = 103/174 (59%)
 Frame = +3

Query: 444  DKKAVYRHIVCSGANVNAVNKRMXXXXXXXXXXXXNEPSLDRNSSCLEEDSSEKTSPDKX 623
            DKKAVY  IV   A+V+AV ++                 L     C    SS  T     
Sbjct: 669  DKKAVYWLIVNHEADVSAVYEQASCSSSLTLAKTMLLQELANPDDCC---SSYSTGNSVD 725

Query: 624  XXXXXXXXXXXXEDRNVEESFEGRSLLQIACETADVGMIELLLQYGANINATDSRGQTAL 803
                         +    E  +G +LL IACETAD+GM+ELLLQYGANIN+TDS GQT L
Sbjct: 726  RSSTISLNFPGTTEGQTLEDVDGCTLLHIACETADIGMLELLLQYGANINSTDSGGQTPL 785

Query: 804  HHCVIRGKSVFAKLLLTRGANPQAVDREGRTPLQHAAKSSLNDSELLSMLADTN 965
            H C++RG++  AK+LLTRGA+P+AV+ + +TPL+ A +S  ++SE+L++L+D+N
Sbjct: 786  HRCILRGRAGLAKMLLTRGADPRAVNGKDKTPLELAVESKFDESEVLALLSDSN 839


Top