BLASTX nr result

ID: Coptis21_contig00015830 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00015830
         (485 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635163.1| PREDICTED: ankyrin repeat domain-containing ...   117   1e-24
ref|XP_002270437.2| PREDICTED: ankyrin repeat domain-containing ...   117   1e-24
emb|CBI24454.3| unnamed protein product [Vitis vinifera]              117   1e-24
ref|XP_002331749.1| predicted protein [Populus trichocarpa] gi|2...    95   5e-18
ref|XP_002530644.1| aberrant large forked product, putative [Ric...    92   4e-17

>ref|XP_003635163.1| PREDICTED: ankyrin repeat domain-containing protein, chloroplastic
           isoform 2 [Vitis vinifera]
          Length = 406

 Score =  117 bits (293), Expect = 1e-24
 Identities = 68/154 (44%), Positives = 87/154 (56%), Gaps = 1/154 (0%)
 Frame = -3

Query: 459 VGDCVVFEEGIFEDPYLQKDYNFEKPSNK-KKQTVSLPPEEDLVPEKWKEAVVEYNITKK 283
           +GDC+VFEEG+FEDPYLQ +++F   + K  K  + + P E+LVPEKWKE   + NITKK
Sbjct: 73  IGDCLVFEEGVFEDPYLQDNFDFNAQNPKHNKPNLEIEP-ENLVPEKWKEVQEQINITKK 131

Query: 282 ERKKIALQIEYGSRIERKNTKLPXXXXXXXXXXXXXXXXXLNPVVLEKPEFXXXXXXXXX 103
           ER+KIA Q+EYGSR+E++   L                  L P+VL+KP           
Sbjct: 132 ERRKIAQQLEYGSRVEKRKQGLVPISQEDYSSYRETKLAQLKPLVLDKP--TSFPVKEEA 189

Query: 102 XXXXXXXXXXGRVLSSRVAPRNPRVAVYKGTLDD 1
                         SSRV PRNPR AVY GTL+D
Sbjct: 190 AEAAPVEGNPNEPTSSRVVPRNPRRAVYGGTLED 223


>ref|XP_002270437.2| PREDICTED: ankyrin repeat domain-containing protein, chloroplastic
           isoform 1 [Vitis vinifera]
          Length = 439

 Score =  117 bits (293), Expect = 1e-24
 Identities = 68/154 (44%), Positives = 87/154 (56%), Gaps = 1/154 (0%)
 Frame = -3

Query: 459 VGDCVVFEEGIFEDPYLQKDYNFEKPSNK-KKQTVSLPPEEDLVPEKWKEAVVEYNITKK 283
           +GDC+VFEEG+FEDPYLQ +++F   + K  K  + + P E+LVPEKWKE   + NITKK
Sbjct: 73  IGDCLVFEEGVFEDPYLQDNFDFNAQNPKHNKPNLEIEP-ENLVPEKWKEVQEQINITKK 131

Query: 282 ERKKIALQIEYGSRIERKNTKLPXXXXXXXXXXXXXXXXXLNPVVLEKPEFXXXXXXXXX 103
           ER+KIA Q+EYGSR+E++   L                  L P+VL+KP           
Sbjct: 132 ERRKIAQQLEYGSRVEKRKQGLVPISQEDYSSYRETKLAQLKPLVLDKP--TSFPVKEEA 189

Query: 102 XXXXXXXXXXGRVLSSRVAPRNPRVAVYKGTLDD 1
                         SSRV PRNPR AVY GTL+D
Sbjct: 190 AEAAPVEGNPNEPTSSRVVPRNPRRAVYGGTLED 223


>emb|CBI24454.3| unnamed protein product [Vitis vinifera]
          Length = 531

 Score =  117 bits (293), Expect = 1e-24
 Identities = 68/154 (44%), Positives = 87/154 (56%), Gaps = 1/154 (0%)
 Frame = -3

Query: 459 VGDCVVFEEGIFEDPYLQKDYNFEKPSNK-KKQTVSLPPEEDLVPEKWKEAVVEYNITKK 283
           +GDC+VFEEG+FEDPYLQ +++F   + K  K  + + P E+LVPEKWKE   + NITKK
Sbjct: 165 IGDCLVFEEGVFEDPYLQDNFDFNAQNPKHNKPNLEIEP-ENLVPEKWKEVQEQINITKK 223

Query: 282 ERKKIALQIEYGSRIERKNTKLPXXXXXXXXXXXXXXXXXLNPVVLEKPEFXXXXXXXXX 103
           ER+KIA Q+EYGSR+E++   L                  L P+VL+KP           
Sbjct: 224 ERRKIAQQLEYGSRVEKRKQGLVPISQEDYSSYRETKLAQLKPLVLDKP--TSFPVKEEA 281

Query: 102 XXXXXXXXXXGRVLSSRVAPRNPRVAVYKGTLDD 1
                         SSRV PRNPR AVY GTL+D
Sbjct: 282 AEAAPVEGNPNEPTSSRVVPRNPRRAVYGGTLED 315


>ref|XP_002331749.1| predicted protein [Populus trichocarpa] gi|222874446|gb|EEF11577.1|
           predicted protein [Populus trichocarpa]
          Length = 401

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 61/164 (37%), Positives = 80/164 (48%), Gaps = 9/164 (5%)
 Frame = -3

Query: 465 HVVGDCVVFEEGIFEDPYLQKDYNFEKPSN------KKKQTVSLPPEEDLVPEKWKEAVV 304
           H +GDC+VFEEGIFEDPYL+ + N  + S       K K+ V    EE+LVPE W+E   
Sbjct: 57  HAIGDCIVFEEGIFEDPYLENNSNAIEDSKLRSVQKKIKRVVPKIEEENLVPENWREVQA 116

Query: 303 EYNITKKERKKIALQIEYGSRIERKN---TKLPXXXXXXXXXXXXXXXXXLNPVVLEKPE 133
           E NI KKER+KIA ++EY  + ERK      +                  L P+VL+ P+
Sbjct: 117 EINIGKKERRKIAQELEYNKKFERKRKGLVPIRNVNLEEYQAFREAKLAQLKPLVLDYPQ 176

Query: 132 FXXXXXXXXXXXXXXXXXXXGRVLSSRVAPRNPRVAVYKGTLDD 1
                                 ++S RV  +NPR AVY   LDD
Sbjct: 177 ------SIKEEEEEEEEDEVREIVSERVKGKNPRWAVYGRGLDD 214


>ref|XP_002530644.1| aberrant large forked product, putative [Ricinus communis]
           gi|223529817|gb|EEF31752.1| aberrant large forked
           product, putative [Ricinus communis]
          Length = 446

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 62/174 (35%), Positives = 80/174 (45%), Gaps = 19/174 (10%)
 Frame = -3

Query: 465 HVVGDCVVFEEGIFEDPYLQ-------------KDYNFEKPSNKKKQTVSLPPEEDLVPE 325
           HV+GDC+VFEEG FE PYL+             K     K   KKK  + +  E +LVP+
Sbjct: 67  HVIGDCLVFEEGAFEGPYLENASSSVLDQESDPKQKTKNKNKKKKKNVIEIEAE-NLVPD 125

Query: 324 KWKEAVVEYNITKKERKKIALQIEYGSRIERKNTKL---PXXXXXXXXXXXXXXXXXLNP 154
           KW+E   E NITKKER+KIA ++E+ SR+E+K   L                     L P
Sbjct: 126 KWREVQAEINITKKERRKIAQELEFNSRVEKKKKGLRPIRALNLEEYKAYREAKLAQLKP 185

Query: 153 VVLEKP---EFXXXXXXXXXXXXXXXXXXXGRVLSSRVAPRNPRVAVYKGTLDD 1
           +VL+ P   +                        S RVAP+NPR AVY    DD
Sbjct: 186 LVLDNPSSFQVEKEDENEEEEEKEKEKVEMSESCSERVAPKNPRWAVYGKGFDD 239


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