BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00015829
         (332 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283513.1| PREDICTED: ribosome production factor 2 homo...   201   4e-50
ref|XP_002528588.1| brix domain containing protein, putative [Ri...   195   3e-48
ref|NP_001043185.1| Os01g0513800 [Oryza sativa Japonica Group] g...   194   5e-48
ref|XP_003564848.1| PREDICTED: ribosome production factor 2 homo...   194   5e-48
gb|AFC90090.1| brix domain-containing protein [Nicotiana bentham...   194   6e-48

>ref|XP_002283513.1| PREDICTED: ribosome production factor 2 homolog [Vitis vinifera]
           gi|297740066|emb|CBI30248.3| unnamed protein product
           [Vitis vinifera]
          Length = 315

 Score =  201 bits (512), Expect = 4e-50
 Identities = 91/110 (82%), Positives = 106/110 (96%)
 Frame = -1

Query: 332 VLTEIFHLKRGSAIKYSRKNDNIRPFENGGETSLEFFSQKTDCSLFVFGSHSKKRPDNLV 153
           VLTEI+HLK+ SA++Y+RKN+NIRPFE+GGETSLEFFS KTDCS+FVFGSHSKKRPDNLV
Sbjct: 45  VLTEIYHLKKDSAVRYTRKNENIRPFESGGETSLEFFSLKTDCSIFVFGSHSKKRPDNLV 104

Query: 152 LGRTYDHHIYDLVEVGVENFRSMNSYSYDKKIAPKVGTKPFFAFIGEGFE 3
           +GRTYDHHIYDLVEVGVENF+SM S++YDKK++PKVG+KPF AFIGEGFE
Sbjct: 105 IGRTYDHHIYDLVEVGVENFKSMESFTYDKKLSPKVGSKPFIAFIGEGFE 154


>ref|XP_002528588.1| brix domain containing protein, putative [Ricinus communis]
           gi|223531984|gb|EEF33796.1| brix domain containing
           protein, putative [Ricinus communis]
          Length = 315

 Score =  195 bits (496), Expect = 3e-48
 Identities = 88/110 (80%), Positives = 104/110 (94%)
 Frame = -1

Query: 332 VLTEIFHLKRGSAIKYSRKNDNIRPFENGGETSLEFFSQKTDCSLFVFGSHSKKRPDNLV 153
           VLT+I+HLK+ SAI+Y+RKNDNIRPFE+GGETSLEFFS+KTDCS+FV+GS SKKRPDNLV
Sbjct: 45  VLTDIYHLKKESAIRYTRKNDNIRPFESGGETSLEFFSEKTDCSIFVYGSTSKKRPDNLV 104

Query: 152 LGRTYDHHIYDLVEVGVENFRSMNSYSYDKKIAPKVGTKPFFAFIGEGFE 3
           +GRTYDHHIYDLVEVG+ENF+SM+S+ YDKK AP VG+KPF AF+GEGFE
Sbjct: 105 IGRTYDHHIYDLVEVGIENFKSMSSFKYDKKAAPHVGSKPFIAFVGEGFE 154


>ref|NP_001043185.1| Os01g0513800 [Oryza sativa Japonica Group]
           gi|18202717|sp|Q9AWM9.1|RPF2_ORYSJ RecName:
           Full=Ribosome production factor 2 homolog; AltName:
           Full=Brix domain-containing protein 1 homolog; AltName:
           Full=Ribosome biogenesis protein RPF2 homolog
           gi|13161376|dbj|BAB32971.1| brix domain containing
           protein 1 (33.5 kD)-like protein [Oryza sativa Japonica
           Group] gi|113532716|dbj|BAF05099.1| Os01g0513800 [Oryza
           sativa Japonica Group] gi|125526163|gb|EAY74277.1|
           hypothetical protein OsI_02165 [Oryza sativa Indica
           Group] gi|125570593|gb|EAZ12108.1| hypothetical protein
           OsJ_01990 [Oryza sativa Japonica Group]
           gi|215704732|dbj|BAG94760.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 310

 Score =  194 bits (494), Expect = 5e-48
 Identities = 89/110 (80%), Positives = 103/110 (93%)
 Frame = -1

Query: 332 VLTEIFHLKRGSAIKYSRKNDNIRPFENGGETSLEFFSQKTDCSLFVFGSHSKKRPDNLV 153
           VL ++FHLKR +A+KYS+KNDNIRPFE+GGETSLEFFS KTDCSL V+GSHSKKRP+NLV
Sbjct: 46  VLADLFHLKRDNAVKYSKKNDNIRPFESGGETSLEFFSLKTDCSLIVYGSHSKKRPNNLV 105

Query: 152 LGRTYDHHIYDLVEVGVENFRSMNSYSYDKKIAPKVGTKPFFAFIGEGFE 3
           LGRTYDHHIYDLVEVGVEN++S+ SY YDKK+APK+G+KPFFAFIGE FE
Sbjct: 106 LGRTYDHHIYDLVEVGVENYKSIESYVYDKKLAPKLGSKPFFAFIGEHFE 155


>ref|XP_003564848.1| PREDICTED: ribosome production factor 2 homolog [Brachypodium
           distachyon]
          Length = 310

 Score =  194 bits (494), Expect = 5e-48
 Identities = 89/110 (80%), Positives = 103/110 (93%)
 Frame = -1

Query: 332 VLTEIFHLKRGSAIKYSRKNDNIRPFENGGETSLEFFSQKTDCSLFVFGSHSKKRPDNLV 153
           VL +IFHLKR  A+KY++KNDNIRPFE+GGETSLEFFS K+DCSL V+GSHSKKRP+NLV
Sbjct: 45  VLADIFHLKRDHAVKYTKKNDNIRPFESGGETSLEFFSLKSDCSLLVYGSHSKKRPNNLV 104

Query: 152 LGRTYDHHIYDLVEVGVENFRSMNSYSYDKKIAPKVGTKPFFAFIGEGFE 3
           LGRTYDHHIYDLVEVGVEN++S+ SY+YDKK+APK+GTKPFFAFIGE FE
Sbjct: 105 LGRTYDHHIYDLVEVGVENYKSIESYAYDKKLAPKLGTKPFFAFIGEHFE 154


>gb|AFC90090.1| brix domain-containing protein [Nicotiana benthamiana]
          Length = 321

 Score =  194 bits (493), Expect = 6e-48
 Identities = 85/110 (77%), Positives = 102/110 (92%)
 Frame = -1

Query: 332 VLTEIFHLKRGSAIKYSRKNDNIRPFENGGETSLEFFSQKTDCSLFVFGSHSKKRPDNLV 153
           V+TEI+HLKR +++KY+RKNDN+RPFE+GGE SLEFFS KTDCSLFV+GSHSKKRP+NLV
Sbjct: 51  VMTEIYHLKRDNSVKYTRKNDNVRPFESGGEASLEFFSLKTDCSLFVYGSHSKKRPNNLV 110

Query: 152 LGRTYDHHIYDLVEVGVENFRSMNSYSYDKKIAPKVGTKPFFAFIGEGFE 3
           +GRTYDHH+YDLVEVGVE F+SM S+ YDK +APK+G+KPFF FIGEGFE
Sbjct: 111 IGRTYDHHVYDLVEVGVEEFKSMKSFKYDKNLAPKIGSKPFFTFIGEGFE 160