BLASTX nr result

ID: Coptis21_contig00015819 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00015819
         (402 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002298784.1| predicted protein [Populus trichocarpa] gi|2...    99   4e-19
ref|XP_002516559.1| protein transporter, putative [Ricinus commu...    96   2e-18
ref|XP_002324811.1| predicted protein [Populus trichocarpa] gi|2...    92   4e-17
ref|NP_001237269.1| VHS and GAT domain protein [Glycine max] gi|...    86   3e-15
ref|XP_003544671.1| PREDICTED: uncharacterized protein LOC100809...    84   9e-15

>ref|XP_002298784.1| predicted protein [Populus trichocarpa]
           gi|224092316|ref|XP_002309555.1| predicted protein
           [Populus trichocarpa] gi|222846042|gb|EEE83589.1|
           predicted protein [Populus trichocarpa]
           gi|222855531|gb|EEE93078.1| predicted protein [Populus
           trichocarpa]
          Length = 159

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 48/72 (66%), Positives = 58/72 (80%), Gaps = 2/72 (2%)
 Frame = -3

Query: 400 GQRPEAQFIEQRMHGLTVRDDSALRNSSYQ--TAGYRPSSIPAKPEDKLFGDLVDMAKLK 227
           G +   Q+++QRMHGL+VRDD+ LRNSSYQ  T+ Y PS  P+KPEDKLFGDLVD++K K
Sbjct: 88  GPQQGTQYLDQRMHGLSVRDDNGLRNSSYQVPTSSYVPSGKPSKPEDKLFGDLVDISKFK 147

Query: 226 PKTSTPGRAGSM 191
           P  STPGRAGSM
Sbjct: 148 PGKSTPGRAGSM 159


>ref|XP_002516559.1| protein transporter, putative [Ricinus communis]
           gi|223544379|gb|EEF45900.1| protein transporter,
           putative [Ricinus communis]
          Length = 667

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 48/72 (66%), Positives = 57/72 (79%), Gaps = 2/72 (2%)
 Frame = -3

Query: 400 GQRPEAQFIEQRMHGLTVRDDSALRNSSYQ--TAGYRPSSIPAKPEDKLFGDLVDMAKLK 227
           GQ+   QF+EQRM+GL+VRDD+ LRNSSYQ  T+ Y P   P+KPEDKLFGDLVD+AK K
Sbjct: 596 GQQQGTQFLEQRMYGLSVRDDNGLRNSSYQVSTSSYVPLKKPSKPEDKLFGDLVDIAKFK 655

Query: 226 PKTSTPGRAGSM 191
           P  STP +AGSM
Sbjct: 656 PTKSTPEKAGSM 667


>ref|XP_002324811.1| predicted protein [Populus trichocarpa] gi|222866245|gb|EEF03376.1|
           predicted protein [Populus trichocarpa]
          Length = 674

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 45/72 (62%), Positives = 56/72 (77%), Gaps = 2/72 (2%)
 Frame = -3

Query: 400 GQRPEAQFIEQRMHGLTVRDDSALRNSSYQ--TAGYRPSSIPAKPEDKLFGDLVDMAKLK 227
           G +   Q++EQRM+G++VRDD+ LRNSSYQ  T  Y PS  P+KPEDKLFGDLVD++K K
Sbjct: 603 GLQQGTQYLEQRMNGVSVRDDNGLRNSSYQVSTTPYVPSGKPSKPEDKLFGDLVDISKFK 662

Query: 226 PKTSTPGRAGSM 191
           P  STPGRAG +
Sbjct: 663 PGKSTPGRAGGL 674


>ref|NP_001237269.1| VHS and GAT domain protein [Glycine max] gi|82791812|gb|ABB90835.1|
           VHS and GAT domain protein [Glycine max]
          Length = 672

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 46/71 (64%), Positives = 56/71 (78%), Gaps = 2/71 (2%)
 Frame = -3

Query: 397 QRPEAQFIEQRMHGLTVRDDSALRNSSYQ--TAGYRPSSIPAKPEDKLFGDLVDMAKLKP 224
           Q+    +IE++M+G++VRDDS+LRN  YQ  T  Y PS  P+KPEDKLFGDLVDMAK+KP
Sbjct: 604 QQQGVPYIERQMYGMSVRDDSSLRNP-YQASTTSYAPSGKPSKPEDKLFGDLVDMAKVKP 662

Query: 223 KTSTPGRAGSM 191
           K  TPGRAGSM
Sbjct: 663 K-PTPGRAGSM 672


>ref|XP_003544671.1| PREDICTED: uncharacterized protein LOC100809022 [Glycine max]
          Length = 672

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 45/65 (69%), Positives = 54/65 (83%), Gaps = 2/65 (3%)
 Frame = -3

Query: 379 FIEQRMHGLTVRDDSALRNSSYQ--TAGYRPSSIPAKPEDKLFGDLVDMAKLKPKTSTPG 206
           +IE++M+G++VRDDS+LRN  YQ  T  Y PS  P+KPEDKLFGDLVDMAK+KPK  TPG
Sbjct: 610 YIERQMYGMSVRDDSSLRNP-YQASTTSYVPSGKPSKPEDKLFGDLVDMAKVKPK-PTPG 667

Query: 205 RAGSM 191
           RAGSM
Sbjct: 668 RAGSM 672


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