BLASTX nr result

ID: Coptis21_contig00015818 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00015818
         (460 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631826.1| PREDICTED: uncharacterized protein LOC100249...    66   1e-20
ref|XP_002284083.2| PREDICTED: uncharacterized protein LOC100249...    66   7e-20
ref|XP_002324811.1| predicted protein [Populus trichocarpa] gi|2...    70   8e-20
ref|XP_002516559.1| protein transporter, putative [Ricinus commu...    70   2e-18
ref|XP_003526479.1| PREDICTED: TOM1-like protein 1-like [Glycine...    52   2e-13

>ref|XP_003631826.1| PREDICTED: uncharacterized protein LOC100249280 isoform 2 [Vitis
           vinifera]
          Length = 663

 Score = 66.2 bits (160), Expect(2) = 1e-20
 Identities = 37/80 (46%), Positives = 47/80 (58%), Gaps = 6/80 (7%)
 Frame = +2

Query: 236 PMPMGNNQMMSMYGQQVA------MHNQPFHSNQFEGLPHQPVQGGQMMGIYTQPMNGGQ 397
           P PMGN+Q   MY Q +A      ++ Q   +NQF GL  QP+Q  QM G+  QPM  G 
Sbjct: 512 PQPMGNDQAAVMYSQPIASGHLPGINAQAIPNNQFMGLHSQPIQVAQM-GMLPQPMQAGP 570

Query: 398 LASMQLQPMQSNQVAGYMYG 457
           ++SM  Q M SN +AGY YG
Sbjct: 571 MSSMYPQQMYSNHMAGYGYG 590



 Score = 58.2 bits (139), Expect(2) = 1e-20
 Identities = 28/53 (52%), Positives = 32/53 (60%)
 Frame = +1

Query: 1   QQQQHVYGGTQGGAFPPPPWEGMATVASDGNQQAGTHHLQPMQVPQVAATHSQ 159
           Q Q  VYG   G + PPPPWE   T   D +Q AG  + QPMQVPQ  ATH+Q
Sbjct: 452 QPQSPVYGAQSGSSLPPPPWEAQPT---DNSQLAGAQYPQPMQVPQGFATHAQ 501


>ref|XP_002284083.2| PREDICTED: uncharacterized protein LOC100249280 isoform 1 [Vitis
           vinifera] gi|296081876|emb|CBI20881.3| unnamed protein
           product [Vitis vinifera]
          Length = 691

 Score = 66.2 bits (160), Expect(2) = 7e-20
 Identities = 37/80 (46%), Positives = 47/80 (58%), Gaps = 6/80 (7%)
 Frame = +2

Query: 236 PMPMGNNQMMSMYGQQVA------MHNQPFHSNQFEGLPHQPVQGGQMMGIYTQPMNGGQ 397
           P PMGN+Q   MY Q +A      ++ Q   +NQF GL  QP+Q  QM G+  QPM  G 
Sbjct: 540 PQPMGNDQAAVMYSQPIASGHLPGINAQAIPNNQFMGLHSQPIQVAQM-GMLPQPMQAGP 598

Query: 398 LASMQLQPMQSNQVAGYMYG 457
           ++SM  Q M SN +AGY YG
Sbjct: 599 MSSMYPQQMYSNHMAGYGYG 618



 Score = 55.8 bits (133), Expect(2) = 7e-20
 Identities = 27/53 (50%), Positives = 31/53 (58%)
 Frame = +1

Query: 1   QQQQHVYGGTQGGAFPPPPWEGMATVASDGNQQAGTHHLQPMQVPQVAATHSQ 159
           Q    VYG   G + PPPPWE   T   D +Q AG  + QPMQVPQ  ATH+Q
Sbjct: 480 QPPSPVYGAQSGSSLPPPPWEAQPT---DNSQLAGAQYPQPMQVPQGFATHAQ 529


>ref|XP_002324811.1| predicted protein [Populus trichocarpa] gi|222866245|gb|EEF03376.1|
           predicted protein [Populus trichocarpa]
          Length = 674

 Score = 70.1 bits (170), Expect(2) = 8e-20
 Identities = 40/95 (42%), Positives = 53/95 (55%), Gaps = 15/95 (15%)
 Frame = +2

Query: 218 AQSFTQPMPMG---------NNQMMSMYGQQV------AMHNQPFHSNQFEGLPHQPVQG 352
           A + +QP+P G          N+ + MY Q +      A++NQ   SNQF G+    +QG
Sbjct: 509 AVTHSQPLPSGMHPQGPQPGGNEQVGMYMQPITTGHLPAVNNQSAPSNQFLGMNPHAMQG 568

Query: 353 GQMMGIYTQPMNGGQLASMQLQPMQSNQVAGYMYG 457
           GQ MG+Y QPM  G +ASM  Q M  NQ+AGY YG
Sbjct: 569 GQYMGMYPQPMQAGPMASMYPQQMYGNQMAGYGYG 603



 Score = 51.6 bits (122), Expect(2) = 8e-20
 Identities = 27/57 (47%), Positives = 32/57 (56%), Gaps = 4/57 (7%)
 Frame = +1

Query: 1   QQQQH----VYGGTQGGAFPPPPWEGMATVASDGNQQAGTHHLQPMQVPQVAATHSQ 159
           QQQQ     VYG   GG+ PPPPWE      +D +   G  + Q MQV Q+A THSQ
Sbjct: 461 QQQQQPASPVYGAQNGGSLPPPPWEAQ---PADASPVTGAQYPQSMQVTQMAVTHSQ 514


>ref|XP_002516559.1| protein transporter, putative [Ricinus communis]
           gi|223544379|gb|EEF45900.1| protein transporter,
           putative [Ricinus communis]
          Length = 667

 Score = 70.5 bits (171), Expect(2) = 2e-18
 Identities = 39/81 (48%), Positives = 48/81 (59%), Gaps = 6/81 (7%)
 Frame = +2

Query: 236 PMPMGNNQMMSMY------GQQVAMHNQPFHSNQFEGLPHQPVQGGQMMGIYTQPMNGGQ 397
           P P G++ ++ MY      GQ  A+HN    +NQF GL  Q VQGGQ MG+  QPM  GQ
Sbjct: 518 PQPSGSDHVVGMYIQPITGGQLSAIHNPVVQNNQF-GLQPQAVQGGQYMGMLPQPMQAGQ 576

Query: 398 LASMQLQPMQSNQVAGYMYGQ 460
           +AS     M  NQ+AGY YGQ
Sbjct: 577 MASAYPPQMYGNQMAGYGYGQ 597



 Score = 46.6 bits (109), Expect(2) = 2e-18
 Identities = 24/56 (42%), Positives = 31/56 (55%), Gaps = 3/56 (5%)
 Frame = +1

Query: 1   QQQQH---VYGGTQGGAFPPPPWEGMATVASDGNQQAGTHHLQPMQVPQVAATHSQ 159
           QQQQ    V+G    G+ PPPPWE      +DG+  AG+ +   MQ+ QV  TH Q
Sbjct: 455 QQQQPASPVFGAQSSGSLPPPPWEAQ---PADGSPVAGSQYSPQMQLTQVVVTHQQ 507


>ref|XP_003526479.1| PREDICTED: TOM1-like protein 1-like [Glycine max]
          Length = 666

 Score = 51.6 bits (122), Expect(2) = 2e-13
 Identities = 34/81 (41%), Positives = 42/81 (51%), Gaps = 6/81 (7%)
 Frame = +2

Query: 236 PMPMGNNQMMSMYGQQVAMH----NQPFHSNQFEGLPHQPVQG--GQMMGIYTQPMNGGQ 397
           P  MG++Q + MY Q  A H    N    SNQ  GL  Q +QG  G  MG+ +  M+   
Sbjct: 519 PQAMGHDQAVGMYMQPHAGHMSTINNHVQSNQL-GLYRQHIQGAAGPYMGMVSHQMHNSP 577

Query: 398 LASMQLQPMQSNQVAGYMYGQ 460
           +ASM  Q M  NQ  GY YGQ
Sbjct: 578 VASMYPQQMHGNQFGGYGYGQ 598



 Score = 48.9 bits (115), Expect(2) = 2e-13
 Identities = 26/56 (46%), Positives = 33/56 (58%), Gaps = 3/56 (5%)
 Frame = +1

Query: 1   QQQQH---VYGGTQGGAFPPPPWEGMATVASDGNQQAGTHHLQPMQVPQVAATHSQ 159
           QQQQ    VYG   GG+FPPPPWE   T   + +  AG+ + QP+QV Q+  T  Q
Sbjct: 458 QQQQPPSPVYGTASGGSFPPPPWEAQPT--DNNSPVAGSQYPQPLQVSQMIMTSIQ 511