BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00015807
         (406 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002525463.1| pentatricopeptide repeat-containing protein,...   170   1e-40
ref|XP_002319146.1| predicted protein [Populus trichocarpa] gi|2...   162   3e-38
ref|XP_002265471.1| PREDICTED: pentatricopeptide repeat-containi...   160   1e-37
ref|XP_003631749.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   154   7e-36
emb|CAN78346.1| hypothetical protein VITISV_033453 [Vitis vinifera]   152   4e-35

>ref|XP_002525463.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223535276|gb|EEF36953.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 337

 Score =  170 bits (430), Expect = 1e-40
 Identities = 77/108 (71%), Positives = 93/108 (86%)
 Frame = +2

Query: 2   PSIKHYGCMIDMLGRVGMLEEAEKIANGIPSEMVNVVVWRILLGACSFHGNVDIGNRVMK 181
           P IKHYGC++DMLGR G LEEAEK+A GIPSE+VN V+WR LLGACSFHGN +IG RV +
Sbjct: 228 PDIKHYGCLVDMLGRTGRLEEAEKLALGIPSEIVNAVIWRTLLGACSFHGNSEIGERVTR 287

Query: 182 RILEIEKGYAGDYVLLYNIFSGVGRFGEAEKVRSLMDARNALKVPGLS 325
           +I+E+E+GY GDYVL+YNIF+GVGRF +AE++R LMD RNA KVPG S
Sbjct: 288 KIMEMERGYGGDYVLMYNIFAGVGRFEDAERLRVLMDERNAFKVPGHS 335


>ref|XP_002319146.1| predicted protein [Populus trichocarpa] gi|222857522|gb|EEE95069.1|
           predicted protein [Populus trichocarpa]
          Length = 337

 Score =  162 bits (409), Expect = 3e-38
 Identities = 72/108 (66%), Positives = 92/108 (85%)
 Frame = +2

Query: 2   PSIKHYGCMIDMLGRVGMLEEAEKIANGIPSEMVNVVVWRILLGACSFHGNVDIGNRVMK 181
           P IKHYGC++DMLGR G LEEAE +A  IPSE+VNVV+WR LLGACSFHGNV++G RV +
Sbjct: 228 PDIKHYGCVVDMLGRTGRLEEAENMALEIPSEIVNVVIWRTLLGACSFHGNVEMGERVTR 287

Query: 182 RILEIEKGYAGDYVLLYNIFSGVGRFGEAEKVRSLMDARNALKVPGLS 325
           +I+E+E+GY GDYVL+YNIF+G GR+ +AE++R LM+ RNA K+PG S
Sbjct: 288 KIMEMERGYGGDYVLMYNIFAGAGRYEDAERLRKLMNKRNAFKLPGNS 335


>ref|XP_002265471.1| PREDICTED: pentatricopeptide repeat-containing protein At1g09220,
           mitochondrial-like [Vitis vinifera]
          Length = 470

 Score =  160 bits (405), Expect = 1e-37
 Identities = 75/109 (68%), Positives = 91/109 (83%)
 Frame = +2

Query: 2   PSIKHYGCMIDMLGRVGMLEEAEKIANGIPSEMVNVVVWRILLGACSFHGNVDIGNRVMK 181
           P +KHYGC+IDMLGR G L+EAEK+A  IP  +VNVV+WR LLGACSFHGNV++G RV +
Sbjct: 361 PDVKHYGCLIDMLGRAGRLDEAEKMALEIPDYVVNVVIWRTLLGACSFHGNVEMGARVTR 420

Query: 182 RILEIEKGYAGDYVLLYNIFSGVGRFGEAEKVRSLMDARNALKVPGLSW 328
           +ILE+E+ Y GDYVLL NIF+GVGRF + E+VR LMD RNA KVPGLS+
Sbjct: 421 KILEMERKYGGDYVLLSNIFAGVGRFWDVERVRRLMDERNASKVPGLSF 469


>ref|XP_003631749.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g09220, mitochondrial-like [Vitis vinifera]
          Length = 509

 Score =  154 bits (389), Expect = 7e-36
 Identities = 72/108 (66%), Positives = 89/108 (82%)
 Frame = +2

Query: 2   PSIKHYGCMIDMLGRVGMLEEAEKIANGIPSEMVNVVVWRILLGACSFHGNVDIGNRVMK 181
           P +KHYG +IDMLGR G L+EAEK+A   P ++VNVV+WR LLGACSFHGNV++G RV +
Sbjct: 400 PDVKHYGGLIDMLGRAGRLDEAEKMALEFPDDVVNVVIWRTLLGACSFHGNVEMGARVTR 459

Query: 182 RILEIEKGYAGDYVLLYNIFSGVGRFGEAEKVRSLMDARNALKVPGLS 325
           +ILE+E+ Y GDYVLL NIF+GVGRF + E+VR LMD RNA K+PGLS
Sbjct: 460 KILEMERKYGGDYVLLSNIFAGVGRFWDVERVRRLMDERNASKLPGLS 507


>emb|CAN78346.1| hypothetical protein VITISV_033453 [Vitis vinifera]
          Length = 538

 Score =  152 bits (383), Expect = 4e-35
 Identities = 71/103 (68%), Positives = 86/103 (83%)
 Frame = +2

Query: 2   PSIKHYGCMIDMLGRVGMLEEAEKIANGIPSEMVNVVVWRILLGACSFHGNVDIGNRVMK 181
           P +KHYGC+IDMLGR G L+EAEK+A  IP+ +VNVV+WR LLGACSFHGNV++G RV +
Sbjct: 361 PDVKHYGCLIDMLGRAGRLDEAEKMALEIPNYVVNVVIWRTLLGACSFHGNVEMGARVTR 420

Query: 182 RILEIEKGYAGDYVLLYNIFSGVGRFGEAEKVRSLMDARNALK 310
           +ILE+EK Y GDYVLL NIF+GVGRF + E+VR LMD RNA K
Sbjct: 421 KILEMEKKYGGDYVLLSNIFAGVGRFWDVERVRRLMDERNASK 463