BLASTX nr result

ID: Coptis21_contig00015802 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00015802
         (240 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAR95994.1| putative ribonucleotide reductase large subunit [...   139   2e-31
ref|XP_002534320.1| ribonucleoside-diphosphate reductase large c...   134   8e-30
gb|AEC11061.1| ribonucleotide reductase large subunit a [Camelli...   133   2e-29
ref|XP_002278202.1| PREDICTED: ribonucleoside-diphosphate reduct...   133   2e-29
ref|XP_002307143.1| predicted protein [Populus trichocarpa] gi|2...   133   2e-29

>gb|AAR95994.1| putative ribonucleotide reductase large subunit [Musa acuminata]
          Length = 810

 Score =  139 bits (350), Expect = 2e-31
 Identities = 64/74 (86%), Positives = 71/74 (95%)
 Frame = +3

Query: 18  LSGEFVVVNKHLLHDLVEMGMWSPALKNKIIYENGSVLMVPEIPDDLKAIYRTIWEIKQR 197
           LSGEFVVVNKHLLHDL EMG+WSPALKNKIIYE+GSVL +PEIPD+LKAIY+T+WEIKQR
Sbjct: 649 LSGEFVVVNKHLLHDLTEMGLWSPALKNKIIYEDGSVLKIPEIPDNLKAIYKTVWEIKQR 708

Query: 198 SLVDMAVDRGCYKD 239
           +LVDMAVDRGCY D
Sbjct: 709 TLVDMAVDRGCYID 722


>ref|XP_002534320.1| ribonucleoside-diphosphate reductase large chain, putative [Ricinus
           communis] gi|223525502|gb|EEF28063.1|
           ribonucleoside-diphosphate reductase large chain,
           putative [Ricinus communis]
          Length = 776

 Score =  134 bits (337), Expect = 8e-30
 Identities = 61/74 (82%), Positives = 68/74 (91%)
 Frame = +3

Query: 18  LSGEFVVVNKHLLHDLVEMGMWSPALKNKIIYENGSVLMVPEIPDDLKAIYRTIWEIKQR 197
           LSGEFVVVNKHLLHDL EMG+WSP LKNKIIYE+GSV  +PEIPDDLK IY+T+WEIKQ+
Sbjct: 649 LSGEFVVVNKHLLHDLTEMGLWSPTLKNKIIYEDGSVQKIPEIPDDLKLIYKTVWEIKQK 708

Query: 198 SLVDMAVDRGCYKD 239
           +LVDMAVDRGCY D
Sbjct: 709 TLVDMAVDRGCYID 722


>gb|AEC11061.1| ribonucleotide reductase large subunit a [Camellia sinensis]
          Length = 160

 Score =  133 bits (334), Expect = 2e-29
 Identities = 60/74 (81%), Positives = 69/74 (93%)
 Frame = +3

Query: 18  LSGEFVVVNKHLLHDLVEMGMWSPALKNKIIYENGSVLMVPEIPDDLKAIYRTIWEIKQR 197
           LSGEFVVVNKHLLHDL EMG+WSPALKN+IIYE+GSV  +PEIPD+LK IY+T+WEIKQ+
Sbjct: 1   LSGEFVVVNKHLLHDLTEMGLWSPALKNQIIYEDGSVQKIPEIPDELKVIYKTVWEIKQK 60

Query: 198 SLVDMAVDRGCYKD 239
           +LVDMAVDRGCY D
Sbjct: 61  TLVDMAVDRGCYID 74


>ref|XP_002278202.1| PREDICTED: ribonucleoside-diphosphate reductase large subunit
           [Vitis vinifera] gi|296082544|emb|CBI21549.3| unnamed
           protein product [Vitis vinifera]
          Length = 808

 Score =  133 bits (334), Expect = 2e-29
 Identities = 61/74 (82%), Positives = 68/74 (91%)
 Frame = +3

Query: 18  LSGEFVVVNKHLLHDLVEMGMWSPALKNKIIYENGSVLMVPEIPDDLKAIYRTIWEIKQR 197
           LSGEFVVVNKHLLHDL EMG+WSP LKN+IIYENGSVL + EIP+DLK IYRT+WEIKQ+
Sbjct: 649 LSGEFVVVNKHLLHDLTEMGLWSPTLKNQIIYENGSVLKMSEIPEDLKVIYRTVWEIKQK 708

Query: 198 SLVDMAVDRGCYKD 239
           +LVDMAVDRGCY D
Sbjct: 709 TLVDMAVDRGCYID 722


>ref|XP_002307143.1| predicted protein [Populus trichocarpa] gi|222856592|gb|EEE94139.1|
           predicted protein [Populus trichocarpa]
          Length = 817

 Score =  133 bits (334), Expect = 2e-29
 Identities = 61/74 (82%), Positives = 69/74 (93%)
 Frame = +3

Query: 18  LSGEFVVVNKHLLHDLVEMGMWSPALKNKIIYENGSVLMVPEIPDDLKAIYRTIWEIKQR 197
           LSGEFVVVNKHLLHDL EMG+WSPALKNKIIYE+GSV  +PEIP+DLK IY+T+WEIKQ+
Sbjct: 650 LSGEFVVVNKHLLHDLTEMGLWSPALKNKIIYEDGSVQNIPEIPNDLKFIYKTVWEIKQK 709

Query: 198 SLVDMAVDRGCYKD 239
           +LVDMAVDRGCY D
Sbjct: 710 TLVDMAVDRGCYID 723


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