BLASTX nr result
ID: Coptis21_contig00015772
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00015772 (565 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003607639.1| F-box/LRR-repeat protein [Medicago truncatul... 58 1e-06 ref|XP_003551381.1| PREDICTED: F-box/FBD/LRR-repeat protein At5g... 55 8e-06 >ref|XP_003607639.1| F-box/LRR-repeat protein [Medicago truncatula] gi|355508694|gb|AES89836.1| F-box/LRR-repeat protein [Medicago truncatula] Length = 467 Score = 57.8 bits (138), Expect = 1e-06 Identities = 42/120 (35%), Positives = 58/120 (48%), Gaps = 11/120 (9%) Frame = +3 Query: 6 LSCAKDYLNDLPIFENLLRLEVHKDFHHFSTRSLLHLPRIAPYLETLV-----------F 152 L+ AK L+ LP F+NL RLEVH F S L + R +P LE L F Sbjct: 314 LNYAKSALHLLPSFKNLTRLEVH--FDDPSCEVLADILRKSPKLEFLHIYGVHLVSCSRF 371 Query: 153 KGERPYPEDGEGWILETVPQCSLLHLKKVDYWEFEGHCVEFDVIKYLLENASVLEEMVLH 332 D E W +++P C LK D +F G E ++K+LLEN ++L EM ++ Sbjct: 372 SSGSYLSLDSEDWTSDSLPCCFKSSLKSCDISDFRGDEAEIRLVKFLLENVTLLREMNIY 431 >ref|XP_003551381.1| PREDICTED: F-box/FBD/LRR-repeat protein At5g56420-like [Glycine max] Length = 409 Score = 55.1 bits (131), Expect = 8e-06 Identities = 38/106 (35%), Positives = 62/106 (58%), Gaps = 3/106 (2%) Frame = +3 Query: 30 NDLPIFENLLRLEVHKDFHHFSTRSLLHLPRIAPYLETL-VFKGERPYPEDGEG-WILET 203 +D+P+F+ L++LE+ F ++S L L + + LE L ++K + Y + E WI Sbjct: 277 SDIPVFDKLIQLEI--SFGNYSWDLLASLLQRSHKLEVLTIYKEPQKYAKGQEPRWIHPL 334 Query: 204 -VPQCSLLHLKKVDYWEFEGHCVEFDVIKYLLENASVLEEMVLHTS 338 VP+C LLHLK E++G E D + Y+++NA VLE M ++ S Sbjct: 335 LVPEC-LLHLKTFCLREYQGLETELDFVGYIMQNARVLETMTIYIS 379