BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00015763
         (651 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003626292.1| Pentatricopeptide repeat-containing protein ...   313   2e-83
ref|XP_002280725.1| PREDICTED: pentatricopeptide repeat-containi...   310   2e-82
emb|CAN74829.1| hypothetical protein VITISV_002140 [Vitis vinifera]   310   2e-82
ref|XP_002319538.1| predicted protein [Populus trichocarpa] gi|2...   308   6e-82
ref|XP_003520812.1| PREDICTED: pentatricopeptide repeat-containi...   302   3e-80

>ref|XP_003626292.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355501307|gb|AES82510.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 650

 Score =  313 bits (801), Expect = 2e-83
 Identities = 153/216 (70%), Positives = 170/216 (78%)
 Frame = -2

Query: 650  SLAVKKSFLSNPYVSNGLINMYSKCGELGESIKVFSQMVQKNSVSWNSMIAAFARHGRGF 471
            SL +KK+F  NP+V NGL+NMYSKCG+L +S+ VF QM QKNSVSWNS+IAAFARHG GF
Sbjct: 376  SLIIKKNFCENPFVGNGLVNMYSKCGDLSDSLLVFYQMTQKNSVSWNSVIAAFARHGDGF 435

Query: 470  EALQLYEEMKLESVEPTDVTFLSLIHACSHIGTVEKGMEFLESMSKVHGISPRMEHYACV 291
            +ALQ YEEM++E V PTDVTFLSL+HACSH G VEKGME LESM+  HGISPR EHYACV
Sbjct: 436  KALQFYEEMRVEGVAPTDVTFLSLLHACSHAGLVEKGMELLESMTNDHGISPRSEHYACV 495

Query: 290  VDMLGRAGHLNEAKIFIESLPVQPGVIVWQALLGACSIHGDSLMGRYAADNFNCLQPESP 111
            VDMLGRAGHLNEAK FIE LP   GV+VWQALLGACSIHGDS MG+YAAD      P SP
Sbjct: 496  VDMLGRAGHLNEAKKFIEGLPEHGGVLVWQALLGACSIHGDSEMGKYAADRLFSAAPASP 555

Query: 110  IPYILMANIYSSEGRWADRARIIXXXXXXXXXKEAG 3
             PY+LMANIYSSEG W +RA  I         KE G
Sbjct: 556  APYVLMANIYSSEGNWKERASSIKRMKEMGVAKEVG 591



 Score = 65.9 bits (159), Expect = 6e-09
 Identities = 43/140 (30%), Positives = 74/140 (52%), Gaps = 7/140 (5%)
 Frame = -2

Query: 611 VSNGLINMYSKCGELGESIKVFSQMVQKNSVSWNSMIAAFARHGRGFEALQLYEEMK-LE 435
           V N LI  Y KC    +  KVF +M+++N V+W ++I+  A++    ++L+L+ +M+   
Sbjct: 186 VGNALITSYFKCECFSQGRKVFDEMIERNVVTWTAVISGLAQNEFYEDSLRLFAQMRCCG 245

Query: 434 SVEPTDVTFLSLIHACSHIGTVEKGMEFLESMSKVHGISPR--MEHYACV----VDMLGR 273
           SV P  +T+LS + ACS       G++ L    K+HG+  +  M+   C+    +D+  +
Sbjct: 246 SVSPNVLTYLSSLMACS-------GLQVLRDGQKIHGLLWKLGMQSDLCIESALMDLYSK 298

Query: 272 AGHLNEAKIFIESLPVQPGV 213
            G L+ A    ES     GV
Sbjct: 299 CGSLDAAWQIFESAEELDGV 318


>ref|XP_002280725.1| PREDICTED: pentatricopeptide repeat-containing protein At3g05340
            [Vitis vinifera]
          Length = 656

 Score =  310 bits (793), Expect = 2e-82
 Identities = 153/216 (70%), Positives = 176/216 (81%)
 Frame = -2

Query: 650  SLAVKKSFLSNPYVSNGLINMYSKCGELGESIKVFSQMVQKNSVSWNSMIAAFARHGRGF 471
            SL +KKSF SN +V+NGLINMYSKCG+L +SIK+F  M Q+NSVSWNSMIAAFARHG G 
Sbjct: 382  SLIIKKSFGSNYFVNNGLINMYSKCGDLDDSIKIFCWMPQRNSVSWNSMIAAFARHGNGS 441

Query: 470  EALQLYEEMKLESVEPTDVTFLSLIHACSHIGTVEKGMEFLESMSKVHGISPRMEHYACV 291
             ALQLYEEM+LE V PTDVTFLSL+HAC+H+G VEKGM FLESM+K +GI PRMEHYACV
Sbjct: 442  RALQLYEEMRLEGVWPTDVTFLSLLHACAHVGLVEKGMGFLESMAKDYGIGPRMEHYACV 501

Query: 290  VDMLGRAGHLNEAKIFIESLPVQPGVIVWQALLGACSIHGDSLMGRYAADNFNCLQPESP 111
            VDM+GRAG LNEAK FIE LP +PG++VWQALLGACSIHG+S MG+YAA+      PESP
Sbjct: 502  VDMMGRAGLLNEAKKFIERLPEKPGILVWQALLGACSIHGNSEMGKYAANQLFLQAPESP 561

Query: 110  IPYILMANIYSSEGRWADRARIIXXXXXXXXXKEAG 3
             PYIL+ANIYSSEG+W +RAR I         KE G
Sbjct: 562  APYILLANIYSSEGKWKERARTIKKMKDMGVTKETG 597



 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 38/124 (30%), Positives = 70/124 (56%), Gaps = 1/124 (0%)
 Frame = -2

Query: 611 VSNGLINMYSKCGELGESIKVFSQMVQKNSVSWNSMIAAFARHGRGFEALQLYEEMKLES 432
           V N LI  Y +CG      +VF +M +KN V+W ++I+  ++     E+L+L+ +M+   
Sbjct: 193 VGNALITSYFRCGCCSSGRRVFDEMSEKNVVTWTAVISGLSQGQFYEESLKLFGKMRDGP 252

Query: 431 VEPTDVTFLSLIHACSHIGTVEKGMEFLESMSKVHGISPRMEHYACVVDMLGRAGHLNEA 252
           V+P  +T+LS + ACS +  + +G +    + K+ G+   +   + ++DM  + G L +A
Sbjct: 253 VDPNSLTYLSSLMACSGLQAIREGRQIHGLVWKL-GVHFDLCIESALMDMYSKCGSLEDA 311

Query: 251 -KIF 243
            KIF
Sbjct: 312 WKIF 315


>emb|CAN74829.1| hypothetical protein VITISV_002140 [Vitis vinifera]
          Length = 542

 Score =  310 bits (793), Expect = 2e-82
 Identities = 153/216 (70%), Positives = 176/216 (81%)
 Frame = -2

Query: 650 SLAVKKSFLSNPYVSNGLINMYSKCGELGESIKVFSQMVQKNSVSWNSMIAAFARHGRGF 471
           SL +KKSF SN +V+NGLINMYSKCG+L +SIK+F  M Q+NSVSWNSMIAAFARHG G 
Sbjct: 268 SLIIKKSFGSNYFVNNGLINMYSKCGDLDDSIKIFCWMPQRNSVSWNSMIAAFARHGNGS 327

Query: 470 EALQLYEEMKLESVEPTDVTFLSLIHACSHIGTVEKGMEFLESMSKVHGISPRMEHYACV 291
            ALQLYEEM+LE V PTDVTFLSL+HAC+H+G VEKGM FLESM+K +GI PRMEHYACV
Sbjct: 328 RALQLYEEMRLEGVWPTDVTFLSLLHACAHVGLVEKGMGFLESMAKDYGIGPRMEHYACV 387

Query: 290 VDMLGRAGHLNEAKIFIESLPVQPGVIVWQALLGACSIHGDSLMGRYAADNFNCLQPESP 111
           VDM+GRAG LNEAK FIE LP +PG++VWQALLGACSIHG+S MG+YAA+      PESP
Sbjct: 388 VDMMGRAGLLNEAKKFIERLPEKPGILVWQALLGACSIHGNSEMGKYAANQLFLQAPESP 447

Query: 110 IPYILMANIYSSEGRWADRARIIXXXXXXXXXKEAG 3
            PYIL+ANIYSSEG+W +RAR I         KE G
Sbjct: 448 APYILLANIYSSEGKWKERARTIKKMKDMGVTKETG 483



 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 38/124 (30%), Positives = 70/124 (56%), Gaps = 1/124 (0%)
 Frame = -2

Query: 611 VSNGLINMYSKCGELGESIKVFSQMVQKNSVSWNSMIAAFARHGRGFEALQLYEEMKLES 432
           V N LI  Y +CG      +VF +M +KN V+W ++I+  ++     E+L+L+ +M+   
Sbjct: 79  VGNALITSYFRCGCCSSGRRVFDEMSEKNVVTWTAVISGLSQGQFYEESLKLFGKMRDGP 138

Query: 431 VEPTDVTFLSLIHACSHIGTVEKGMEFLESMSKVHGISPRMEHYACVVDMLGRAGHLNEA 252
           V+P  +T+LS + ACS +  + +G +    + K+ G+   +   + ++DM  + G L +A
Sbjct: 139 VDPNSLTYLSSLMACSGLQAIREGRQIHGLVWKL-GVHFDLCIESALMDMYSKCGSLEDA 197

Query: 251 -KIF 243
            KIF
Sbjct: 198 WKIF 201


>ref|XP_002319538.1| predicted protein [Populus trichocarpa] gi|222857914|gb|EEE95461.1|
           predicted protein [Populus trichocarpa]
          Length = 577

 Score =  308 bits (789), Expect = 6e-82
 Identities = 150/216 (69%), Positives = 176/216 (81%)
 Frame = -2

Query: 650 SLAVKKSFLSNPYVSNGLINMYSKCGELGESIKVFSQMVQKNSVSWNSMIAAFARHGRGF 471
           SL +K+SF SNP+V NGLINMYSKCG+L +S KVFS+M   NSVSWNSMIAAFARHG G 
Sbjct: 285 SLVIKRSFGSNPFVGNGLINMYSKCGDLEDSTKVFSRMPCMNSVSWNSMIAAFARHGDGS 344

Query: 470 EALQLYEEMKLESVEPTDVTFLSLIHACSHIGTVEKGMEFLESMSKVHGISPRMEHYACV 291
            ALQLY+EM+L+ VEPTDVTFLSL+HACSH+G VEKGMEFL+SM++VH ++PRMEHYACV
Sbjct: 345 RALQLYKEMRLKGVEPTDVTFLSLLHACSHVGLVEKGMEFLKSMTEVHKLTPRMEHYACV 404

Query: 290 VDMLGRAGHLNEAKIFIESLPVQPGVIVWQALLGACSIHGDSLMGRYAADNFNCLQPESP 111
           VDMLGRAG LNEAK FIE LP++P V+VWQALLGAC IHGD  MG+YAA++     PE P
Sbjct: 405 VDMLGRAGLLNEAKTFIEGLPIKPDVLVWQALLGACGIHGDPEMGKYAAEHLILSAPEKP 464

Query: 110 IPYILMANIYSSEGRWADRARIIXXXXXXXXXKEAG 3
            PYIL+ANIYSS+GRW +RA+ I         KE G
Sbjct: 465 SPYILLANIYSSKGRWKERAKTIKRMKEMCVAKETG 500



 Score = 68.2 bits (165), Expect = 1e-09
 Identities = 39/138 (28%), Positives = 71/138 (51%)
 Frame = -2

Query: 647 LAVKKSFLSNPYVSNGLINMYSKCGELGESIKVFSQMVQKNSVSWNSMIAAFARHGRGFE 468
           LAV   F     V N LI  Y KCG     ++VF +M+++N ++W ++I+   +     +
Sbjct: 84  LAVLNGFQREISVGNALITSYFKCGFSSSGMQVFDEMLERNVITWTAIISGLVQSELYRD 143

Query: 467 ALQLYEEMKLESVEPTDVTFLSLIHACSHIGTVEKGMEFLESMSKVHGISPRMEHYACVV 288
           +L+L+ EM    VEP  +T+LS + ACS +  + +G +    + K+ G+       + ++
Sbjct: 144 SLRLFVEMTNGLVEPNSLTYLSSLMACSGLQALREGCQIHGRVWKL-GLQSDFCVESALM 202

Query: 287 DMLGRAGHLNEAKIFIES 234
           DM  + G + +     ES
Sbjct: 203 DMYSKCGSMGDTLQIFES 220



 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 39/150 (26%), Positives = 77/150 (51%), Gaps = 2/150 (1%)
 Frame = -2

Query: 611 VSNGLINMYSKCGELGESIKVFSQMVQKNSVSWNSMIAAFARHGRGFEALQLYEEMKLES 432
           V + L++MYSKCG +G+++++F    Q + VS   ++A FA++G   EA+Q + +M LE+
Sbjct: 197 VESALMDMYSKCGSMGDTLQIFESAGQLDKVSMTIILAGFAQNGFEEEAMQFFVKM-LEA 255

Query: 431 VEPTDVTFLSLIHACSHIGTVEKGMEFLESM--SKVHGISPRMEHYACVVDMLGRAGHLN 258
               D   +S +       T     + + S+   +  G +P + +   +++M  + G L 
Sbjct: 256 GTEIDSNMVSAVLGVFGADTSLGLGQQIHSLVIKRSFGSNPFVGN--GLINMYSKCGDLE 313

Query: 257 EAKIFIESLPVQPGVIVWQALLGACSIHGD 168
           ++      +P    V  W +++ A + HGD
Sbjct: 314 DSTKVFSRMPCMNSV-SWNSMIAAFARHGD 342


>ref|XP_003520812.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g05340-like [Glycine max]
          Length = 753

 Score =  302 bits (774), Expect = 3e-80
 Identities = 146/216 (67%), Positives = 174/216 (80%)
 Frame = -2

Query: 650 SLAVKKSFLSNPYVSNGLINMYSKCGELGESIKVFSQMVQKNSVSWNSMIAAFARHGRGF 471
           SL +KK+F+ N +VSNGLINMYSKCG+L +S++VF +M QKNSVSWNS+IAA+AR+G GF
Sbjct: 214 SLIIKKNFIQNLFVSNGLINMYSKCGDLYDSLQVFHEMTQKNSVSWNSVIAAYARYGDGF 273

Query: 470 EALQLYEEMKLESVEPTDVTFLSLIHACSHIGTVEKGMEFLESMSKVHGISPRMEHYACV 291
            ALQ Y++M++E +  TDVTFLSL+HACSH G VEKGMEFLESM++ HG+SPR EHYACV
Sbjct: 274 RALQFYDDMRVEGIALTDVTFLSLLHACSHAGLVEKGMEFLESMTRDHGLSPRSEHYACV 333

Query: 290 VDMLGRAGHLNEAKIFIESLPVQPGVIVWQALLGACSIHGDSLMGRYAADNFNCLQPESP 111
           VDMLGRAG L EAK FIE LP  PGV+VWQALLGACSIHGDS MG+YAA+      P+SP
Sbjct: 334 VDMLGRAGLLKEAKKFIEGLPENPGVLVWQALLGACSIHGDSEMGKYAANQLFLATPDSP 393

Query: 110 IPYILMANIYSSEGRWADRARIIXXXXXXXXXKEAG 3
            PY+LMANIYSSEG+W +RAR I         KE G
Sbjct: 394 APYVLMANIYSSEGKWKERARSIKKMKEMGVAKEVG 429



 Score = 65.1 bits (157), Expect = 1e-08
 Identities = 47/156 (30%), Positives = 76/156 (48%), Gaps = 37/156 (23%)
 Frame = -2

Query: 590 MYSKCGELGESIKVFSQMVQKNSVSWNSMIAAFARH-----GRGF--------------- 471
           MYSKCG+L ++IK+F  M  K++VSWN++I+ F R+     GR                 
Sbjct: 1   MYSKCGKLQDAIKLFDHMPVKDTVSWNAIISGFLRNRDCDTGRQVFDEMLERNVVTWTAV 60

Query: 470 -----------EALQLYEEMKLESVEPTDVTFLSLIHACSHIGTVEKGMEFLESMSKVHG 324
                      + L+L+++M+  SV P  +T+LS + ACS       G++ L    K+HG
Sbjct: 61  ISGLAQNEFYEDGLRLFDQMRRGSVSPNSLTYLSALMACS-------GLQALLEGRKIHG 113

Query: 323 ISPR--MEHYACV----VDMLGRAGHLNEAKIFIES 234
           +  +  M+   C+    +D+  + G L EA    ES
Sbjct: 114 LLWKLGMQSDLCIESALMDLYSKCGSLEEAWEIFES 149