BLASTX nr result
ID: Coptis21_contig00015762
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00015762 (259 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_565338.1| RNA helicase, ATP-dependent, SK12/DOB1 protein ... 172 2e-41 ref|XP_002883745.1| HUA enhancer 2 [Arabidopsis lyrata subsp. ly... 172 2e-41 ref|XP_003630609.1| ATP-dependent RNA helicase DOB1 [Medicago tr... 172 2e-41 gb|AAL11446.1| HUA enhancer 2 [Arabidopsis thaliana] 172 2e-41 ref|XP_003530466.1| PREDICTED: superkiller viralicidic activity ... 172 3e-41 >ref|NP_565338.1| RNA helicase, ATP-dependent, SK12/DOB1 protein [Arabidopsis thaliana] gi|20197305|gb|AAC67203.2| expressed protein [Arabidopsis thaliana] gi|28973761|gb|AAO64196.1| putative DEAD/DEAH box RNA helicase (HUA ENHANCER2) [Arabidopsis thaliana] gi|330250934|gb|AEC06028.1| RNA helicase, ATP-dependent, SK12/DOB1 protein [Arabidopsis thaliana] Length = 995 Score = 172 bits (437), Expect = 2e-41 Identities = 84/86 (97%), Positives = 86/86 (100%) Frame = +2 Query: 2 LQRGIAVHHSGLLPIIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTSVKKWDGD 181 LQRGIAVHHSGLLP+IKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFT+VKKWDGD Sbjct: 398 LQRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGD 457 Query: 182 SHRYIGSGEYIQMSGRAGRRGKDERG 259 SHRYIGSGEYIQMSGRAGRRGKDERG Sbjct: 458 SHRYIGSGEYIQMSGRAGRRGKDERG 483 >ref|XP_002883745.1| HUA enhancer 2 [Arabidopsis lyrata subsp. lyrata] gi|297329585|gb|EFH60004.1| HUA enhancer 2 [Arabidopsis lyrata subsp. lyrata] Length = 984 Score = 172 bits (437), Expect = 2e-41 Identities = 84/86 (97%), Positives = 86/86 (100%) Frame = +2 Query: 2 LQRGIAVHHSGLLPIIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTSVKKWDGD 181 LQRGIAVHHSGLLP+IKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFT+VKKWDGD Sbjct: 393 LQRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGD 452 Query: 182 SHRYIGSGEYIQMSGRAGRRGKDERG 259 SHRYIGSGEYIQMSGRAGRRGKDERG Sbjct: 453 SHRYIGSGEYIQMSGRAGRRGKDERG 478 >ref|XP_003630609.1| ATP-dependent RNA helicase DOB1 [Medicago truncatula] gi|355524631|gb|AET05085.1| ATP-dependent RNA helicase DOB1 [Medicago truncatula] Length = 984 Score = 172 bits (437), Expect = 2e-41 Identities = 84/86 (97%), Positives = 86/86 (100%) Frame = +2 Query: 2 LQRGIAVHHSGLLPIIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTSVKKWDGD 181 LQRGIAVHHSGLLP+IKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFT+VKKWDGD Sbjct: 397 LQRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGD 456 Query: 182 SHRYIGSGEYIQMSGRAGRRGKDERG 259 SHRYIGSGEYIQMSGRAGRRGKDERG Sbjct: 457 SHRYIGSGEYIQMSGRAGRRGKDERG 482 >gb|AAL11446.1| HUA enhancer 2 [Arabidopsis thaliana] Length = 991 Score = 172 bits (437), Expect = 2e-41 Identities = 84/86 (97%), Positives = 86/86 (100%) Frame = +2 Query: 2 LQRGIAVHHSGLLPIIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTSVKKWDGD 181 LQRGIAVHHSGLLP+IKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFT+VKKWDGD Sbjct: 394 LQRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGD 453 Query: 182 SHRYIGSGEYIQMSGRAGRRGKDERG 259 SHRYIGSGEYIQMSGRAGRRGKDERG Sbjct: 454 SHRYIGSGEYIQMSGRAGRRGKDERG 479 >ref|XP_003530466.1| PREDICTED: superkiller viralicidic activity 2-like 2-like [Glycine max] Length = 976 Score = 172 bits (436), Expect = 3e-41 Identities = 83/86 (96%), Positives = 86/86 (100%) Frame = +2 Query: 2 LQRGIAVHHSGLLPIIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTSVKKWDGD 181 LQRGIAVHHSGLLP+IKELVELLFQEGLVKALFATETFAMGLNMPAKTV+FT+VKKWDGD Sbjct: 388 LQRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVIFTAVKKWDGD 447 Query: 182 SHRYIGSGEYIQMSGRAGRRGKDERG 259 SHRYIGSGEYIQMSGRAGRRGKDERG Sbjct: 448 SHRYIGSGEYIQMSGRAGRRGKDERG 473