BLASTX nr result

ID: Coptis21_contig00015730 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00015730
         (792 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI29088.3| unnamed protein product [Vitis vinifera]              228   9e-58
ref|XP_002526926.1| conserved hypothetical protein [Ricinus comm...   216   3e-54
ref|XP_002273944.2| PREDICTED: uncharacterized protein LOC100262...   209   4e-52
emb|CAN73832.1| hypothetical protein VITISV_043069 [Vitis vinifera]   207   2e-51
ref|XP_002300075.1| predicted protein [Populus trichocarpa] gi|2...   202   7e-50

>emb|CBI29088.3| unnamed protein product [Vitis vinifera]
          Length = 1124

 Score =  228 bits (582), Expect = 9e-58
 Identities = 122/241 (50%), Positives = 152/241 (63%), Gaps = 4/241 (1%)
 Frame = +3

Query: 3    VLRIIRGNLTVTIALVSVILVCFVHPXXXXXXXXXXXXXXXXXXXXXFLAASFRSHARKR 182
            V+R +R N  +  ALV++ LVCFVHP                     F  ASFRSHAR++
Sbjct: 876  VVRALRANPLLVTALVAITLVCFVHPALGLFILLFSHALCCHNALCGFFTASFRSHARRK 935

Query: 183  EF-DSKTKVDLGKSNF--KPNSGFDPLLPLEEKSPNSPNSTRSYGDTQIETFNHRHGXXX 353
            E  D   + + G   F  K     +  +PL+E   +SPNS +S+ DTQ+E F+HRHG   
Sbjct: 936  ELIDYINEGNGGVEQFQLKDEGELNQSVPLDESYSSSPNSAKSFSDTQLEIFHHRHGILI 995

Query: 354  XXXXXXXMFVPSFVAWFQRIGVGQSFPWFLDSALCVGVILHGLCGSKAEYNFISFPFLHI 533
                   MFVPS VAWFQRIG+GQSFPW LDSALCVGVI HG+C SK E+N + FPF  I
Sbjct: 996  LHLLAALMFVPSLVAWFQRIGMGQSFPWLLDSALCVGVIFHGICDSKPEFNPLLFPFPVI 1055

Query: 534  QG-QQVGLSIVYMLAGFYCYLSGLALAPYRAFYAMAAVGVISAVLRILEKSYRDKGEAYF 710
             G Q+V  S +Y+ AG Y YLSGLALAPYR FYAMAA+G+IS   +I+E+  R+KGEAY 
Sbjct: 1056 PGFQEVRRSHIYLFAGLYSYLSGLALAPYRVFYAMAAIGLISFTFKIIERRSREKGEAYV 1115

Query: 711  S 713
            S
Sbjct: 1116 S 1116


>ref|XP_002526926.1| conserved hypothetical protein [Ricinus communis]
            gi|223533678|gb|EEF35413.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 1110

 Score =  216 bits (551), Expect = 3e-54
 Identities = 119/238 (50%), Positives = 149/238 (62%), Gaps = 2/238 (0%)
 Frame = +3

Query: 3    VLRIIRGNLTVTIALVSVILVCFVHPXXXXXXXXXXXXXXXXXXXXXFLAASFRSHARKR 182
            V+R++R N ++  AL ++ L CFVHP                     FL ASFRSHAR++
Sbjct: 867  VVRVLRVNPSLVTALTAITLGCFVHPALGLFILLLSHALCCHNALCGFLTASFRSHARRK 926

Query: 183  E-FDSKTKVDLGKSNFKPNSGF-DPLLPLEEKSPNSPNSTRSYGDTQIETFNHRHGXXXX 356
            E FD K + +     F  ++G  +   PLEE S NSPNS++S+GDTQ+E F+HRHG    
Sbjct: 927  ELFDCKDEENKRSQEFASSNGVCNHNSPLEENSSNSPNSSKSFGDTQLEIFHHRHGLLIL 986

Query: 357  XXXXXXMFVPSFVAWFQRIGVGQSFPWFLDSALCVGVILHGLCGSKAEYNFISFPFLHIQ 536
                  MFVPS VAW QRIG+G SFPWFLDSALC+GVILHG+  +K E N   F    IQ
Sbjct: 987  HFLAALMFVPSLVAWLQRIGLGHSFPWFLDSALCIGVILHGILNTKPECN-SQFSLSVIQ 1045

Query: 537  GQQVGLSIVYMLAGFYCYLSGLALAPYRAFYAMAAVGVISAVLRILEKSYRDKGEAYF 710
            G+++ L  VY+LAG+Y YL GL L PYR FYAMAAVG IS  LRIL    ++KGE  F
Sbjct: 1046 GRELRLDFVYLLAGYYSYLYGLGLEPYRVFYAMAAVGFISLALRILWS--KEKGEQRF 1101


>ref|XP_002273944.2| PREDICTED: uncharacterized protein LOC100262596 [Vitis vinifera]
          Length = 417

 Score =  209 bits (533), Expect = 4e-52
 Identities = 115/239 (48%), Positives = 146/239 (61%), Gaps = 4/239 (1%)
 Frame = +3

Query: 3   VLRIIRGNLTVTIALVSVILVCFVHPXXXXXXXXXXXXXXXXXXXXXFLAASFRSHARKR 182
           V+R +R N  +  ALV++ LVCFVHP                         +   HAR++
Sbjct: 156 VVRALRANPLLVTALVAITLVCFVHPALGLFILLFSHALCCHN--------ALCGHARRK 207

Query: 183 EF-DSKTKVDLGKSNF--KPNSGFDPLLPLEEKSPNSPNSTRSYGDTQIETFNHRHGXXX 353
           E  D   + + G   F  K     +  +PL+E   +SPNS +S+ DTQ+E F+HRHG   
Sbjct: 208 ELIDYINEGNGGVEQFQLKDEGELNQSVPLDESYSSSPNSAKSFSDTQLEIFHHRHGILI 267

Query: 354 XXXXXXXMFVPSFVAWFQRIGVGQSFPWFLDSALCVGVILHGLCGSKAEYNFISFPFLHI 533
                  MFVPS VAWFQRIG+GQSFPW LDSALCVGVI HG+C SK E+N + FPF  I
Sbjct: 268 LHLLAALMFVPSLVAWFQRIGMGQSFPWLLDSALCVGVIFHGICDSKPEFNPLLFPFPVI 327

Query: 534 QG-QQVGLSIVYMLAGFYCYLSGLALAPYRAFYAMAAVGVISAVLRILEKSYRDKGEAY 707
            G Q+V  S +Y+ AG Y YLSGLALAPYR FYAMAA+G+IS   +I+E+  R+KGEAY
Sbjct: 328 PGFQEVRRSHIYLFAGLYSYLSGLALAPYRVFYAMAAIGLISFTFKIIERRSREKGEAY 386


>emb|CAN73832.1| hypothetical protein VITISV_043069 [Vitis vinifera]
          Length = 239

 Score =  207 bits (528), Expect = 2e-51
 Identities = 108/194 (55%), Positives = 133/194 (68%), Gaps = 4/194 (2%)
 Frame = +3

Query: 144 FLAASFRSHARKREF-DSKTKVDLGKSNF--KPNSGFDPLLPLEEKSPNSPNSTRSYGDT 314
           F  ASFRSHAR++E  D   + + G   F  K     +  +PL+E   +SPNS +S+ DT
Sbjct: 21  FFTASFRSHARRKELIDYINEGNGGVEQFQLKXEGELNQSVPLDESYSSSPNSAKSFSDT 80

Query: 315 QIETFNHRHGXXXXXXXXXXMFVPSFVAWFQRIGVGQSFPWFLDSALCVGVILHGLCGSK 494
           Q+E F+HRHG          MFVPS VAWFQRIG+GQSFPW LDSALCVGVI HG+C SK
Sbjct: 81  QLEIFHHRHGILILHLLAALMFVPSLVAWFQRIGMGQSFPWLLDSALCVGVIFHGICDSK 140

Query: 495 AEYNFISFPFLHIQG-QQVGLSIVYMLAGFYCYLSGLALAPYRAFYAMAAVGVISAVLRI 671
            E+N + FPF  I G Q+V  S +Y+ AG Y YLSGLALAPYR FYAMAA+G+IS   +I
Sbjct: 141 PEFNPLLFPFPVIPGFQEVRRSHIYLFAGLYSYLSGLALAPYRVFYAMAAIGLISFTFKI 200

Query: 672 LEKSYRDKGEAYFS 713
           +E+  R+KGEAY S
Sbjct: 201 IERRSREKGEAYVS 214


>ref|XP_002300075.1| predicted protein [Populus trichocarpa] gi|222847333|gb|EEE84880.1|
            predicted protein [Populus trichocarpa]
          Length = 834

 Score =  202 bits (514), Expect = 7e-50
 Identities = 112/239 (46%), Positives = 145/239 (60%), Gaps = 3/239 (1%)
 Frame = +3

Query: 3    VLRIIRGNLTVTIALVSVILVCFVHPXXXXXXXXXXXXXXXXXXXXXFLAASFRSHARKR 182
            V+R++R N  +  AL ++ L CFV P                         +  SHAR +
Sbjct: 596  VVRVLRVNPLLVTALTAITLGCFVQPALGLFILILSHALCCHN--------ALCSHARMK 647

Query: 183  EF-DSKTKVDLGKSNF--KPNSGFDPLLPLEEKSPNSPNSTRSYGDTQIETFNHRHGXXX 353
            E  D K   +     F  K ++G D    LEE S +SP+S+RS+GDTQ+E F+HRHG   
Sbjct: 648  ELLDFKDVGNERSQQFASKHDAGLDQNFQLEENSSSSPDSSRSFGDTQLEIFHHRHGLLI 707

Query: 354  XXXXXXXMFVPSFVAWFQRIGVGQSFPWFLDSALCVGVILHGLCGSKAEYNFISFPFLHI 533
                   MFVPSFVAW QRIG+G SFPWFLDSALC+GVILHG+  SK E+N + F F  I
Sbjct: 708  LHLLAALMFVPSFVAWLQRIGMGHSFPWFLDSALCIGVILHGILNSKPEFNSM-FSFPEI 766

Query: 534  QGQQVGLSIVYMLAGFYCYLSGLALAPYRAFYAMAAVGVISAVLRILEKSYRDKGEAYF 710
             G++V L  +Y+LAG+Y Y++GL L PYR FYAMAA+G IS V+RIL +  R+KGE  F
Sbjct: 767  FGKEVRLDFIYLLAGYYSYVAGLGLVPYRVFYAMAAIGFISCVMRILYRRSREKGEPRF 825


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