BLASTX nr result

ID: Coptis21_contig00015729 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00015729
         (972 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281560.1| PREDICTED: uncharacterized protein LOC100243...   283   3e-74
ref|XP_002875644.1| predicted protein [Arabidopsis lyrata subsp....   275   1e-71
ref|XP_002309260.1| predicted protein [Populus trichocarpa] gi|2...   272   8e-71
ref|NP_190001.2| uncharacterized protein [Arabidopsis thaliana] ...   272   1e-70
emb|CAN82373.1| hypothetical protein VITISV_027624 [Vitis vinifera]   271   1e-70

>ref|XP_002281560.1| PREDICTED: uncharacterized protein LOC100243476 [Vitis vinifera]
           gi|297741368|emb|CBI32499.3| unnamed protein product
           [Vitis vinifera]
          Length = 240

 Score =  283 bits (725), Expect = 3e-74
 Identities = 137/222 (61%), Positives = 169/222 (76%), Gaps = 4/222 (1%)
 Frame = -2

Query: 770 MMVIEGNDTNDIYDPCSDASIKTSDGFTFGLVFSSKESFFFNQTQLSPCDRRLNLAGSKA 591
           ++V E +DTND++DPCSDA +K  DGFTFGL FS+K+SFFFNQTQLSPCDRRL+L+ + +
Sbjct: 18  VLVAEADDTNDVFDPCSDAKVKRFDGFTFGLAFSTKDSFFFNQTQLSPCDRRLSLSSTNS 77

Query: 590 QLTVFRPKVDEISLLTINXXXXXXXXSGGYMVAFAGRKYAARSLPVFVADGTNIISSFTL 411
           QL VFRPKVDEISLLT+N        +GGYMVAFAGRKYAARS PV VADG + I+SFTL
Sbjct: 78  QLAVFRPKVDEISLLTVNSTNFNPISNGGYMVAFAGRKYAARSTPVLVADGQHTITSFTL 137

Query: 410 VLEFKKGTLQNLFWNSNGCGSCSG----ICLNQTDCATPVSNCTGKAAGSPDCTTSIQLA 243
           VLEFKKGTLQ+ +W   GC  CS     +CLN+ DCA   S+C  +  GS DC  SIQL 
Sbjct: 138 VLEFKKGTLQSFYWKKFGCSKCSKSSAFVCLNEQDCAVKSSHCKNQ-GGSIDCNISIQLI 196

Query: 242 FAGTDKNDKVLNSWYEVKNLGQYSLFNLYSNLKNSLANPFSN 117
           F+GTDK    LNSWYE+KNL QYSL+ LYSN+++++ + + N
Sbjct: 197 FSGTDKKLVALNSWYELKNLRQYSLYGLYSNIRDAIIDQYDN 238


>ref|XP_002875644.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297321482|gb|EFH51903.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 252

 Score =  275 bits (703), Expect = 1e-71
 Identities = 135/218 (61%), Positives = 166/218 (76%), Gaps = 5/218 (2%)
 Frame = -2

Query: 755 GNDTNDIYDPCSDASIKTSDGFTFGLVFSSKESFFFNQTQL-SPCDRRLNLAGSKAQLTV 579
           G +TN+IY PCSD  I+ SDGFTFG+ FSS+ SFF NQT L SPCDRRL+LA   +Q ++
Sbjct: 34  GGNTNNIYSPCSDTRIQRSDGFTFGIAFSSRPSFFLNQTVLLSPCDRRLSLAAMNSQFSL 93

Query: 578 FRPKVDEISLLTINXXXXXXXXSGGYMVAFAGRKYAARSLPVFVADGTNIISSFTLVLEF 399
           FRPK+DEISLL+IN         GGYMVAFAGRKYAARS+P F+A+ T I++SFTLV+EF
Sbjct: 94  FRPKIDEISLLSINTSAFFPDNYGGYMVAFAGRKYAARSIPAFIANSTFIVTSFTLVMEF 153

Query: 398 KKGTLQNLFWNSNGCGSCSG----ICLNQTDCATPVSNCTGKAAGSPDCTTSIQLAFAGT 231
           +KG LQNL+W  +GC SC G    +CLN+ DCA    +C G+  GS DC+  IQLAF+GT
Sbjct: 154 QKGRLQNLYWKRDGCASCKGNQNFVCLNKQDCAIRTPSCKGR-GGSVDCSLGIQLAFSGT 212

Query: 230 DKNDKVLNSWYEVKNLGQYSLFNLYSNLKNSLANPFSN 117
           DK+  VLNSWYEV+NL QYSL+ LYSNLK+SL N F+N
Sbjct: 213 DKHLAVLNSWYEVENLKQYSLYGLYSNLKSSLTNQFNN 250


>ref|XP_002309260.1| predicted protein [Populus trichocarpa] gi|222855236|gb|EEE92783.1|
           predicted protein [Populus trichocarpa]
          Length = 246

 Score =  272 bits (696), Expect = 8e-71
 Identities = 132/224 (58%), Positives = 167/224 (74%), Gaps = 5/224 (2%)
 Frame = -2

Query: 770 MMVIEGNDTNDIYDPCSDASIKTSDGFTFGLVFSSKESFFFNQT-QLSPCDRRLNLAGSK 594
           ++ ++ ++TN +Y PC+D +++ SDGFTF + FSS ++FFFN T QLSPCD RL+L    
Sbjct: 23  LLPVQSDNTNHVYSPCADTTVQVSDGFTFSIAFSSSKAFFFNSTLQLSPCDSRLSLTSQN 82

Query: 593 AQLTVFRPKVDEISLLTINXXXXXXXXSGGYMVAFAGRKYAARSLPVFVADGTNIISSFT 414
           +Q++VFRPKVDEISLLTIN         GGYMVAFAGRKYAARSLP FVA+ T  ++SFT
Sbjct: 83  SQISVFRPKVDEISLLTINTSSFSPGDFGGYMVAFAGRKYAARSLPAFVANSTYTVTSFT 142

Query: 413 LVLEFKKGTLQNLFWNSNGCGSCSG----ICLNQTDCATPVSNCTGKAAGSPDCTTSIQL 246
           LVLEFKKG LQNL+W  +GC  CSG    +CLN  DCA   S+C  K  GS DC+  IQL
Sbjct: 143 LVLEFKKGRLQNLYWKRDGCAKCSGNSKFVCLNNQDCAIRTSSCI-KNGGSVDCSLGIQL 201

Query: 245 AFAGTDKNDKVLNSWYEVKNLGQYSLFNLYSNLKNSLANPFSNI 114
           AF+GTDK+   LNSWYEV+NL QYSL+ LYSNL++SL + ++NI
Sbjct: 202 AFSGTDKHFSALNSWYEVENLRQYSLYGLYSNLRDSLTSQYNNI 245


>ref|NP_190001.2| uncharacterized protein [Arabidopsis thaliana]
           gi|17529172|gb|AAL38812.1| unknown protein [Arabidopsis
           thaliana] gi|23297558|gb|AAN12895.1| unknown protein
           [Arabidopsis thaliana] gi|332644348|gb|AEE77869.1|
           uncharacterized protein [Arabidopsis thaliana]
          Length = 246

 Score =  272 bits (695), Expect = 1e-70
 Identities = 134/216 (62%), Positives = 164/216 (75%), Gaps = 5/216 (2%)
 Frame = -2

Query: 749 DTNDIYDPCSDASIKTSDGFTFGLVFSSKESFFFNQTQL-SPCDRRLNLAGSKAQLTVFR 573
           +TN IY PCSD  I+ SDGFTFG+ FSS+ SFF NQT L SPCDRRL+LA   +Q +VFR
Sbjct: 30  NTNTIYSPCSDTRIQRSDGFTFGIAFSSRPSFFINQTVLLSPCDRRLSLAAMNSQFSVFR 89

Query: 572 PKVDEISLLTINXXXXXXXXSGGYMVAFAGRKYAARSLPVFVADGTNIISSFTLVLEFKK 393
           PK+DEISLL+IN         GGYMVAFAGRKYAARS+P F+A+ T I++SFTLV+EF+K
Sbjct: 90  PKIDEISLLSINTSAFFPDNYGGYMVAFAGRKYAARSIPAFIANSTFIVTSFTLVMEFQK 149

Query: 392 GTLQNLFWNSNGCGSCSG----ICLNQTDCATPVSNCTGKAAGSPDCTTSIQLAFAGTDK 225
           G LQNL+W  +GC SC G    +CLN+ DCA    +C G+  G+ DC+  IQLAF+GTDK
Sbjct: 150 GRLQNLYWKRDGCASCKGNQNFVCLNKQDCAIRTPSCKGR-GGAVDCSLGIQLAFSGTDK 208

Query: 224 NDKVLNSWYEVKNLGQYSLFNLYSNLKNSLANPFSN 117
           +  VLNSWYEV+NL QYSL+ LYSNLK+SL N F+N
Sbjct: 209 HLAVLNSWYEVENLKQYSLYGLYSNLKSSLTNQFNN 244


>emb|CAN82373.1| hypothetical protein VITISV_027624 [Vitis vinifera]
          Length = 249

 Score =  271 bits (694), Expect = 1e-70
 Identities = 136/233 (58%), Positives = 167/233 (71%), Gaps = 15/233 (6%)
 Frame = -2

Query: 770 MMVIEGNDTNDIYDPCSDASIKTSDGFTFGLVFSSKESFFFNQTQLSPCDRRLNLAGSKA 591
           + V E +DTN ++DPCSDA +K  DGFTFGL FS+K+SFFFNQTQLSPCDRRL+L+ + +
Sbjct: 16  VFVAEADDTNXVFDPCSDAKVKRFDGFTFGLAFSTKDSFFFNQTQLSPCDRRLSLSSTNS 75

Query: 590 QLTVFRPKVDEISLLTIN-----------XXXXXXXXSGGYMVAFAGRKYAARSLPVFVA 444
           QL VFRPKVDEISLLT+N                   +GGYMVAFAGRKYAARS PV VA
Sbjct: 76  QLAVFRPKVDEISLLTVNSTNFNPVWFNDFLVFSQISNGGYMVAFAGRKYAARSTPVLVA 135

Query: 443 DGTNIISSFTLVLEFKKGTLQNLFWNSNGCGSCSG----ICLNQTDCATPVSNCTGKAAG 276
           DG + I+SFTLVLEFKKGTLQ+ +W   GC  CS     +CLN+ DCA   S+C  +  G
Sbjct: 136 DGQHTITSFTLVLEFKKGTLQSFYWKKFGCSKCSKSSAFVCLNEQDCAVKSSHCKNQ-GG 194

Query: 275 SPDCTTSIQLAFAGTDKNDKVLNSWYEVKNLGQYSLFNLYSNLKNSLANPFSN 117
           S DC  SIQL F+GTDK    LNSWYE+KNL QYSL+ LYSN+++++ + + N
Sbjct: 195 SIDCNISIQLIFSGTDKKLVALNSWYELKNLRQYSLYGLYSNIRDAIIDQYDN 247


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