BLASTX nr result
ID: Coptis21_contig00015728
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00015728 (349 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002267278.1| PREDICTED: pentatricopeptide repeat-containi... 160 1e-37 emb|CBI36294.3| unnamed protein product [Vitis vinifera] 160 1e-37 ref|XP_002530894.1| pentatricopeptide repeat-containing protein,... 157 1e-36 ref|XP_002305285.1| predicted protein [Populus trichocarpa] gi|2... 153 2e-35 ref|XP_004156879.1| PREDICTED: pentatricopeptide repeat-containi... 149 2e-34 >ref|XP_002267278.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640, mitochondrial-like [Vitis vinifera] Length = 624 Score = 160 bits (405), Expect = 1e-37 Identities = 74/116 (63%), Positives = 93/116 (80%) Frame = -1 Query: 349 AFEKMHDYHLKPGVDDLDQLVFTLCKRKLVKHAQEFFDRVKFEFPPGPKTYSILMRGWGD 170 AF +M D+ +K GV D+DQL++ LCKRK VK AQEFFD+V E P KTYSILMRGWGD Sbjct: 172 AFHQMGDFGVKAGVGDVDQLLYVLCKRKHVKQAQEFFDKVNVEVMPNAKTYSILMRGWGD 231 Query: 169 VGDSVEARKLFDEILERGCSVDLIAFNTLLESMCRSGKAREAYKMFKEMGLYGLKP 2 VGDS EARKLF+E+ ERGC+VD++A+N+LLE++C+ G EAYK+F+EMG GL P Sbjct: 232 VGDSSEARKLFEEMRERGCAVDVVAYNSLLEALCKGGNVDEAYKLFREMGSNGLAP 287 >emb|CBI36294.3| unnamed protein product [Vitis vinifera] Length = 517 Score = 160 bits (405), Expect = 1e-37 Identities = 74/116 (63%), Positives = 93/116 (80%) Frame = -1 Query: 349 AFEKMHDYHLKPGVDDLDQLVFTLCKRKLVKHAQEFFDRVKFEFPPGPKTYSILMRGWGD 170 AF +M D+ +K GV D+DQL++ LCKRK VK AQEFFD+V E P KTYSILMRGWGD Sbjct: 145 AFHQMGDFGVKAGVGDVDQLLYVLCKRKHVKQAQEFFDKVNVEVMPNAKTYSILMRGWGD 204 Query: 169 VGDSVEARKLFDEILERGCSVDLIAFNTLLESMCRSGKAREAYKMFKEMGLYGLKP 2 VGDS EARKLF+E+ ERGC+VD++A+N+LLE++C+ G EAYK+F+EMG GL P Sbjct: 205 VGDSSEARKLFEEMRERGCAVDVVAYNSLLEALCKGGNVDEAYKLFREMGSNGLAP 260 >ref|XP_002530894.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] gi|223529547|gb|EEF31500.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] Length = 519 Score = 157 bits (396), Expect = 1e-36 Identities = 70/116 (60%), Positives = 94/116 (81%) Frame = -1 Query: 349 AFEKMHDYHLKPGVDDLDQLVFTLCKRKLVKHAQEFFDRVKFEFPPGPKTYSILMRGWGD 170 AF++M ++ LKP +DDLDQL++ LCKRK KHAQ+ FDRVK +F KTYSIL+RGWGD Sbjct: 166 AFDRMVEFGLKPTIDDLDQLLYVLCKRKHAKHAQQIFDRVKHQFQTRAKTYSILVRGWGD 225 Query: 169 VGDSVEARKLFDEILERGCSVDLIAFNTLLESMCRSGKAREAYKMFKEMGLYGLKP 2 +G+SV A K+FDE+ E+ C+VD++A+N+LLE+ C+ GK EAYKMF+EMG G+KP Sbjct: 226 IGESVSACKVFDEMREQQCAVDVLAYNSLLEAFCKGGKVSEAYKMFREMGSNGIKP 281 >ref|XP_002305285.1| predicted protein [Populus trichocarpa] gi|222848249|gb|EEE85796.1| predicted protein [Populus trichocarpa] Length = 523 Score = 153 bits (386), Expect = 2e-35 Identities = 67/116 (57%), Positives = 97/116 (83%) Frame = -1 Query: 349 AFEKMHDYHLKPGVDDLDQLVFTLCKRKLVKHAQEFFDRVKFEFPPGPKTYSILMRGWGD 170 AF++M ++ L+P VDDLD+L++ LCK K VK AQ+FFDRVK +F KTYSIL+RGWGD Sbjct: 170 AFDRMAEFGLRPSVDDLDKLLYVLCKCKHVKCAQQFFDRVKHKFEAKAKTYSILVRGWGD 229 Query: 169 VGDSVEARKLFDEILERGCSVDLIAFNTLLESMCRSGKAREAYKMFKEMGLYGLKP 2 +G++VEARK+FDE+ RGC++D++A+N+LLE++C+ G EAYKMF+E+G +G++P Sbjct: 230 IGEAVEARKVFDEMRGRGCALDVLAYNSLLEALCKGGNVDEAYKMFREIGSHGVEP 285 >ref|XP_004156879.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640, mitochondrial-like [Cucumis sativus] Length = 529 Score = 149 bits (377), Expect = 2e-34 Identities = 69/116 (59%), Positives = 91/116 (78%) Frame = -1 Query: 349 AFEKMHDYHLKPGVDDLDQLVFTLCKRKLVKHAQEFFDRVKFEFPPGPKTYSILMRGWGD 170 AF +M ++ ++ GVDDLD+L++TLCKRK V HAQ+FFD+VK F P KTYSIL RGWG Sbjct: 173 AFNRMGEFGIRAGVDDLDKLLYTLCKRKHVAHAQQFFDKVKSVFNPSVKTYSILTRGWGV 232 Query: 169 VGDSVEARKLFDEILERGCSVDLIAFNTLLESMCRSGKAREAYKMFKEMGLYGLKP 2 VGDS A+K+FDE+ ERGC +D++A+N+LLE++C+ GK EAYKMF EM G+ P Sbjct: 233 VGDSNNAQKVFDEMRERGCLIDVLAYNSLLEALCKGGKRDEAYKMFLEMDSNGVDP 288