BLASTX nr result

ID: Coptis21_contig00015704 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00015704
         (705 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACH63232.1| hypothetical protein [Rheum australe]                   65   1e-17
ref|XP_003593839.1| Thioredoxin family protein [Medicago truncat...    65   1e-16
ref|XP_003593840.1| Thioredoxin family protein [Medicago truncat...    65   1e-16
ref|NP_001236845.1| uncharacterized protein LOC100305543 [Glycin...    67   5e-16
gb|AFK41413.1| unknown [Lotus japonicus]                               66   7e-16

>gb|ACH63232.1| hypothetical protein [Rheum australe]
          Length = 204

 Score = 65.1 bits (157), Expect(2) = 1e-17
 Identities = 29/35 (82%), Positives = 32/35 (91%)
 Frame = -2

Query: 203 QMKRDVVVTIVYEVTPNPSDHKTRAETGGGLSHVE 99
           Q+KRDVV TIVYE+ PNPSDHKTRAETGGGLS +E
Sbjct: 170 QLKRDVVATIVYELMPNPSDHKTRAETGGGLSQIE 204



 Score = 50.8 bits (120), Expect(2) = 1e-17
 Identities = 35/71 (49%), Positives = 40/71 (56%), Gaps = 23/71 (32%)
 Frame = -1

Query: 348 FINRDGIDFSDAQS-RPVLVWAISLCIS-----QT-----------------NFGAETTQ 238
           FINRDGIDFSDAQS + V  W ++  +      QT                 NFGA+TTQ
Sbjct: 99  FINRDGIDFSDAQSMQAVQEWDLAENLQGVLEYQTRYSRFQGVGNLTLHFPDNFGADTTQ 158

Query: 237 ILYIGLKGEAT 205
           I YIGLKGEAT
Sbjct: 159 IHYIGLKGEAT 169


>ref|XP_003593839.1| Thioredoxin family protein [Medicago truncatula]
           gi|355482887|gb|AES64090.1| Thioredoxin family protein
           [Medicago truncatula] gi|388495170|gb|AFK35651.1|
           unknown [Medicago truncatula]
          Length = 204

 Score = 65.1 bits (157), Expect(2) = 1e-16
 Identities = 29/34 (85%), Positives = 32/34 (94%)
 Frame = -2

Query: 203 QMKRDVVVTIVYEVTPNPSDHKTRAETGGGLSHV 102
           Q+KRDVV TIVYE+ PNPSDHKTRAE+GGGLSHV
Sbjct: 170 QLKRDVVATIVYELMPNPSDHKTRAESGGGLSHV 203



 Score = 47.4 bits (111), Expect(2) = 1e-16
 Identities = 32/71 (45%), Positives = 39/71 (54%), Gaps = 23/71 (32%)
 Frame = -1

Query: 348 FINRDGIDFSDAQS-RPVLVWAISLCIS-----QT-----------------NFGAETTQ 238
           FINRDGIDFSDAQS + +  W ++  +      QT                 NFG +TT+
Sbjct: 99  FINRDGIDFSDAQSMQAIQEWDLAENLQGVLEYQTRYSKFQGVGNITLHFPDNFGGDTTK 158

Query: 237 ILYIGLKGEAT 205
           I YIGLKGEAT
Sbjct: 159 IHYIGLKGEAT 169


>ref|XP_003593840.1| Thioredoxin family protein [Medicago truncatula]
           gi|355482888|gb|AES64091.1| Thioredoxin family protein
           [Medicago truncatula]
          Length = 109

 Score = 65.1 bits (157), Expect(2) = 1e-16
 Identities = 29/34 (85%), Positives = 32/34 (94%)
 Frame = -2

Query: 203 QMKRDVVVTIVYEVTPNPSDHKTRAETGGGLSHV 102
           Q+KRDVV TIVYE+ PNPSDHKTRAE+GGGLSHV
Sbjct: 75  QLKRDVVATIVYELMPNPSDHKTRAESGGGLSHV 108



 Score = 47.4 bits (111), Expect(2) = 1e-16
 Identities = 32/71 (45%), Positives = 39/71 (54%), Gaps = 23/71 (32%)
 Frame = -1

Query: 348 FINRDGIDFSDAQS-RPVLVWAISLCIS-----QT-----------------NFGAETTQ 238
           FINRDGIDFSDAQS + +  W ++  +      QT                 NFG +TT+
Sbjct: 4   FINRDGIDFSDAQSMQAIQEWDLAENLQGVLEYQTRYSKFQGVGNITLHFPDNFGGDTTK 63

Query: 237 ILYIGLKGEAT 205
           I YIGLKGEAT
Sbjct: 64  IHYIGLKGEAT 74


>ref|NP_001236845.1| uncharacterized protein LOC100305543 [Glycine max]
           gi|255625863|gb|ACU13276.1| unknown [Glycine max]
          Length = 204

 Score = 66.6 bits (161), Expect(2) = 5e-16
 Identities = 29/35 (82%), Positives = 33/35 (94%)
 Frame = -2

Query: 203 QMKRDVVVTIVYEVTPNPSDHKTRAETGGGLSHVE 99
           Q+KRDVV TIVYE+ PNPSDHKTRAE+GGGLSH+E
Sbjct: 170 QLKRDVVATIVYELMPNPSDHKTRAESGGGLSHIE 204



 Score = 43.5 bits (101), Expect(2) = 5e-16
 Identities = 30/72 (41%), Positives = 36/72 (50%), Gaps = 24/72 (33%)
 Frame = -1

Query: 348 FINRDGIDFSDAQSRPVL------------------------VWAISLCISQTNFGAETT 241
           FINR+GIDFSDAQS   +                        V  I+L   + NFG +TT
Sbjct: 99  FINREGIDFSDAQSMQAIQEWDLVENMQGVLEYQTRYSKFQSVANITLHFPE-NFGGDTT 157

Query: 240 QILYIGLKGEAT 205
           +I YIG KGEAT
Sbjct: 158 KIHYIGFKGEAT 169


>gb|AFK41413.1| unknown [Lotus japonicus]
          Length = 204

 Score = 66.2 bits (160), Expect(2) = 7e-16
 Identities = 29/34 (85%), Positives = 32/34 (94%)
 Frame = -2

Query: 203 QMKRDVVVTIVYEVTPNPSDHKTRAETGGGLSHV 102
           Q+KRDVV TIVYE+TPNPSDHKT AE+GGGLSHV
Sbjct: 170 QLKRDVVATIVYEITPNPSDHKTHAESGGGLSHV 203



 Score = 43.5 bits (101), Expect(2) = 7e-16
 Identities = 30/72 (41%), Positives = 36/72 (50%), Gaps = 24/72 (33%)
 Frame = -1

Query: 348 FINRDGIDFSDAQSRPVL------------------------VWAISLCISQTNFGAETT 241
           FINRDGIDFSDAQS   +                        V  I+L   + +FG +TT
Sbjct: 99  FINRDGIDFSDAQSMQAIQEWDLAENMQGVLEYQTRYSKFQSVGNITLHFPE-SFGGDTT 157

Query: 240 QILYIGLKGEAT 205
           +I YIG KGEAT
Sbjct: 158 KIHYIGFKGEAT 169


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