BLASTX nr result

ID: Coptis21_contig00015700 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00015700
         (434 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002518863.1| kinesin light chain, putative [Ricinus commu...    75   4e-12
gb|AEW69782.1| Hop-interacting protein THI007 [Solanum lycopersi...    75   7e-12
ref|XP_002297963.1| predicted protein [Populus trichocarpa] gi|2...    71   1e-10
ref|XP_002264247.1| PREDICTED: nephrocystin-3 [Vitis vinifera] g...    70   2e-10
ref|XP_004148984.1| PREDICTED: nephrocystin-3-like [Cucumis sati...    69   3e-10

>ref|XP_002518863.1| kinesin light chain, putative [Ricinus communis]
           gi|223541850|gb|EEF43396.1| kinesin light chain,
           putative [Ricinus communis]
          Length = 605

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 46/107 (42%), Positives = 59/107 (55%), Gaps = 9/107 (8%)
 Frame = -3

Query: 294 MPGLVSLKTPPESQPLQILIPETTNEENSSQIQTPK--------IRSPIPNKKQQXXXXX 139
           MPGLVS+KTPP++ PL+I +PE    +  +Q QTP         +R+P PNKK       
Sbjct: 1   MPGLVSVKTPPDAPPLRISVPEI---QPQTQAQTPPQARPESSVLRTPTPNKKPPSPSPS 57

Query: 138 XXXXXXXXXXXXXXXPE-KPKIIDESSLDNPDLGPFLLKQARDTIAS 1
                              P ++ ++SLDNPDLGPFLLK ARDTIAS
Sbjct: 58  RSKPSPTRSAKKPPPDSLNPLLLADASLDNPDLGPFLLKLARDTIAS 104


>gb|AEW69782.1| Hop-interacting protein THI007 [Solanum lycopersicum]
          Length = 605

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 47/103 (45%), Positives = 57/103 (55%), Gaps = 5/103 (4%)
 Frame = -3

Query: 294 MPGLVSLKTPPESQPLQILIPETTNEENSS-----QIQTPKIRSPIPNKKQQXXXXXXXX 130
           MPGLVS+KTPPE+  L+I + +  +  N+S     +   PK  SP P +           
Sbjct: 1   MPGLVSVKTPPETPALRISVSDENHGRNASGSSRSEQVNPKTNSPAPRRPPSPSTSRAKP 60

Query: 129 XXXXXXXXXXXXPEKPKIIDESSLDNPDLGPFLLKQARDTIAS 1
                       PEK +I DESSLDNPDLGPFLLK ARDTIAS
Sbjct: 61  SPDRGSGKKKSPPEKVEI-DESSLDNPDLGPFLLKLARDTIAS 102


>ref|XP_002297963.1| predicted protein [Populus trichocarpa] gi|222845221|gb|EEE82768.1|
           predicted protein [Populus trichocarpa]
          Length = 226

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 42/99 (42%), Positives = 52/99 (52%), Gaps = 1/99 (1%)
 Frame = -3

Query: 294 MPGLVSLKTPPESQPLQILIPETTNEENSSQIQTPKIRSPIPNKKQQXXXXXXXXXXXXX 115
           MPGLVS+KTPP++ PL I +PE   E ++   Q P  R+P P K                
Sbjct: 1   MPGLVSVKTPPDAPPLNISLPEIRPESSTRSEQQP--RTPTPKKPPSPSPSRSKPSPARS 58

Query: 114 XXXXXXXPEKPK-IIDESSLDNPDLGPFLLKQARDTIAS 1
                        ++ + SLDNPDLGPFLLK ARDTIAS
Sbjct: 59  AKKPPPDSPNSNTLLSDPSLDNPDLGPFLLKLARDTIAS 97


>ref|XP_002264247.1| PREDICTED: nephrocystin-3 [Vitis vinifera]
           gi|297745492|emb|CBI40572.3| unnamed protein product
           [Vitis vinifera]
          Length = 596

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 44/98 (44%), Positives = 55/98 (56%)
 Frame = -3

Query: 294 MPGLVSLKTPPESQPLQILIPETTNEENSSQIQTPKIRSPIPNKKQQXXXXXXXXXXXXX 115
           MPGLVS+KTP  S PL+I +PE +  + S    +P+++  + +                 
Sbjct: 1   MPGLVSVKTPRASTPLRIFLPENSQCDGSRN-GSPQVQRRMASPSPSTSTSRARPSPDRG 59

Query: 114 XXXXXXXPEKPKIIDESSLDNPDLGPFLLKQARDTIAS 1
                  PEK  I DESSLDNPDLGPFLLK ARDTIAS
Sbjct: 60  SGRKKTTPEKTTI-DESSLDNPDLGPFLLKMARDTIAS 96


>ref|XP_004148984.1| PREDICTED: nephrocystin-3-like [Cucumis sativus]
           gi|449518869|ref|XP_004166458.1| PREDICTED:
           nephrocystin-3-like [Cucumis sativus]
          Length = 593

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 42/98 (42%), Positives = 52/98 (53%)
 Frame = -3

Query: 294 MPGLVSLKTPPESQPLQILIPETTNEENSSQIQTPKIRSPIPNKKQQXXXXXXXXXXXXX 115
           MPGLVS+KTPP++ PL+I +PET    N       +  SP+  K+               
Sbjct: 1   MPGLVSVKTPPDAPPLRISVPETPPASNH------RPPSPLTKKQPSPSPSRSKPSPNGK 54

Query: 114 XXXXXXXPEKPKIIDESSLDNPDLGPFLLKQARDTIAS 1
                  P   +   +SSLDNPDLGPFLLK ARDTIAS
Sbjct: 55  KKLQPESPTSAQFPPDSSLDNPDLGPFLLKLARDTIAS 92


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