BLASTX nr result

ID: Coptis21_contig00015697 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00015697
         (256 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI23820.3| unnamed protein product [Vitis vinifera]               58   9e-07
gb|AEQ29663.1| STR2 [Solanum tuberosum]                                57   2e-06
gb|AEQ29662.1| STR1 [Solanum tuberosum]                                57   2e-06
ref|XP_002303915.1| cc-nbs-lrr resistance protein [Populus trich...    57   2e-06
gb|AEV53947.1| RB [Solanum kurtzianum]                                 56   3e-06

>emb|CBI23820.3| unnamed protein product [Vitis vinifera]
          Length = 638

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 24/57 (42%), Positives = 40/57 (70%)
 Frame = +3

Query: 9   VLDDAETKQTKDKLIGDWLRKLKDAAYEAEDIMDDCALEFQRTESEAGEPSCGKQFW 179
           +L+DAE KQ+++  I +WL ++KDAAY+AED++++ A E  R  +E+   + G Q W
Sbjct: 52  ILNDAEVKQSENPAIKEWLHEIKDAAYDAEDLLEEIATEALRCTTESDSQTSGTQVW 108


>gb|AEQ29663.1| STR2 [Solanum tuberosum]
          Length = 107

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 25/41 (60%), Positives = 33/41 (80%)
 Frame = +3

Query: 9   VLDDAETKQTKDKLIGDWLRKLKDAAYEAEDIMDDCALEFQ 131
           VL+DA+ KQ KDK I +WL+KL  AAYEA+DI+D+C L+ Q
Sbjct: 44  VLEDAQKKQLKDKAIENWLQKLNSAAYEADDILDECKLKHQ 84


>gb|AEQ29662.1| STR1 [Solanum tuberosum]
          Length = 107

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 25/41 (60%), Positives = 33/41 (80%)
 Frame = +3

Query: 9   VLDDAETKQTKDKLIGDWLRKLKDAAYEAEDIMDDCALEFQ 131
           VL+DA+ KQ KDK I +WL+KL  AAYEA+DI+D+C L+ Q
Sbjct: 44  VLEDAQKKQLKDKAIENWLQKLNSAAYEADDILDECKLKHQ 84


>ref|XP_002303915.1| cc-nbs-lrr resistance protein [Populus trichocarpa]
           gi|222841347|gb|EEE78894.1| cc-nbs-lrr resistance
           protein [Populus trichocarpa]
          Length = 1307

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 27/48 (56%), Positives = 33/48 (68%)
 Frame = +3

Query: 9   VLDDAETKQTKDKLIGDWLRKLKDAAYEAEDIMDDCALEFQRTESEAG 152
           VL+DAE KQ  D  + +WL +LKDA YEAED +D+ A E  R E EAG
Sbjct: 54  VLNDAEKKQISDSFVKEWLDELKDAVYEAEDFLDEVAYEGLRLEVEAG 101


>gb|AEV53947.1| RB [Solanum kurtzianum]
          Length = 165

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 24/44 (54%), Positives = 35/44 (79%)
 Frame = +3

Query: 3   RLVLDDAETKQTKDKLIGDWLRKLKDAAYEAEDIMDDCALEFQR 134
           ++V++DA+ KQ KDKL+ +WL+KL  AAYEA+DI+D+C  E  R
Sbjct: 42  QIVIEDAQEKQLKDKLLENWLQKLNVAAYEADDILDECKTEAAR 85


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