BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00015689
         (898 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulga...    95   2e-32
gb|EEC72938.1| hypothetical protein OsI_06800 [Oryza sativa Indi...    83   2e-30
gb|ABA98491.1| retrotransposon protein, putative, unclassified [...    91   7e-30
gb|AAM18736.1|AC092548_14 putative reverse transcriptase [Oryza ...    91   7e-30
gb|AAP53315.2| retrotransposon protein, putative, unclassified [...    91   7e-30

>emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1369

 Score = 94.7 bits (234), Expect(2) = 2e-32
 Identities = 60/165 (36%), Positives = 88/165 (53%), Gaps = 2/165 (1%)
 Frame = -2

Query: 891  LDKVSRNFWWCGNSQGEGMHLATWDKICSPKKSGGLGLRLNHEFNLALVAKLYWKVLVEQ 712
            ++K+ RNF+W    +   +    W+K+  PKK GGLG+R    FN AL+AK  W++L + 
Sbjct: 827  IEKMCRNFFWGQKEEERRVAWVAWEKLFLPKKEGGLGIRNFDVFNRALLAKQAWRILTKP 886

Query: 711  DSLWAKIMRAKYSKCLALFKPKEVPTNXXXXXXXXXXSRDVIKEGFLVCIGNGEDTFFWK 532
            DSL A++++ KY    + F    V  N          +R VI++G    IG+G DT  W 
Sbjct: 887  DSLMARVIKGKYFP-RSNFLEARVSPNMSFTCKSILSARAVIQKGMCRVIGDGRDTTIWG 945

Query: 531  DPWVKFLDRPVILGE--VTDVVG*LEIKVSEFITPDGQWDVGKLN 403
            DPWV  L+R  I     V++  G    KV E I+ D +W+V  LN
Sbjct: 946  DPWVPSLERYSIAATEGVSEDDG--PQKVCELISND-RWNVELLN 987



 Score = 71.6 bits (174), Expect(2) = 2e-32
 Identities = 38/105 (36%), Positives = 55/105 (52%), Gaps = 3/105 (2%)
 Frame = -3

Query: 380  EITVKSAFHVVVHLNRDHGQSSHDICAENSKC---LWKFNIPPRIKLLIWKLAKNMLPTV 210
            + TV+SA++  +  +R  G S+      N K    +WK  IPP++KL  WK   N L   
Sbjct: 1021 QFTVRSAYYHELLEDRKTGPSTSR--GPNLKLWQKIWKAKIPPKVKLFSWKAIHNGLAVY 1078

Query: 209  VNLRKHKMNVDPVCQMCGIVEESALHTFFKCQWVARVWFASPLAL 75
             N+RK  MN+D  C  CG  EE+  H  + C   +R W+ SPL +
Sbjct: 1079 TNMRKRGMNIDGACPRCGEKEETTEHLIWGCDESSRAWYISPLRI 1123


>gb|EEC72938.1| hypothetical protein OsI_06800 [Oryza sativa Indica Group]
          Length = 556

 Score = 82.8 bits (203), Expect(2) = 2e-30
 Identities = 51/168 (30%), Positives = 79/168 (47%), Gaps = 2/168 (1%)
 Frame = -2

Query: 897 KNLDKVSRNFWWCGNSQGEGMHLATWDKICSPKKSGGLGLRLNHEFNLALVAKLYWKVLV 718
           + L K+ RNFWW         H  +WD + + K  GG+G R    FN AL+A+  W++L 
Sbjct: 223 EELTKLVRNFWWGAEKGKRRTHWKSWDCLIARKLKGGMGFRDFRLFNQALLARQAWRLLD 282

Query: 717 EQDSLWAKIMRAKYSKCLALFKPKEVPTNXXXXXXXXXXSRDVIKEGFLVCIGNGEDTFF 538
             DSL A+I++AKY    +L        N            +++K+G +  IGNG+    
Sbjct: 283 RPDSLCARILKAKYYPNGSLI-DTSFGGNASPGWRAIEYGLELLKKGIIWRIGNGKSVRL 341

Query: 537 WKDPWV--KFLDRPVILGEVTDVVG*LEIKVSEFITPDGQWDVGKLNE 400
           W+DPW+   F  RP+       +       VS+ I     WD  K+++
Sbjct: 342 WRDPWIPRSFSRRPISAKRNCRLRW-----VSDLIDQSESWDTDKISQ 384



 Score = 76.6 bits (187), Expect(2) = 2e-30
 Identities = 37/125 (29%), Positives = 66/125 (52%), Gaps = 2/125 (1%)
 Frame = -3

Query: 374 TVKSAFHVVVHLNR-DHGQSSHDICAENS-KCLWKFNIPPRIKLLIWKLAKNMLPTVVNL 201
           +V+SA+H+ + L + D G SS       +   LWK N P ++K+  W+   N LPT+ N 
Sbjct: 419 SVRSAYHLAIALAQVDEGSSSSGNGNSRAWNALWKCNAPQKVKIFAWRAITNSLPTLENK 478

Query: 200 RKHKMNVDPVCQMCGIVEESALHTFFKCQWVARVWFASPLALRFSDELLVEHNWMKILFQ 21
           +K K+ V  +C +CG+  E  +H  F+C    + W A  + ++ +    + +   K++  
Sbjct: 479 KKRKLEVSDICTICGVESEYVVHALFRCPHARQFWEAMTVDMKLNPLSNIRNGDPKVILD 538

Query: 20  LNEES 6
           L E+S
Sbjct: 539 LLEQS 543


>gb|ABA98491.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1621

 Score = 90.9 bits (224), Expect(2) = 7e-30
 Identities = 52/165 (31%), Positives = 82/165 (49%), Gaps = 1/165 (0%)
 Frame = -2

Query: 891  LDKVSRNFWWCGNSQGEGMHLATWDKICSPKKSGGLGLRLNHEFNLALVAKLYWKVLVEQ 712
            + K+   +WW    +   MH  +W+K+  PK  GGLG R  + FNLA++AK  W+++ + 
Sbjct: 1074 ISKMIAKYWWSNQEKDNKMHWLSWNKLTLPKNMGGLGFRDIYIFNLAMLAKQGWRLIQDP 1133

Query: 711  DSLWAKIMRAKYSKCLALFKPKEVPTNXXXXXXXXXXSRDVIKEGFLVCIGNGEDTFFWK 532
            DSL ++++RAKY      F+PK+  +N             V++ G +  +G+G     W 
Sbjct: 1134 DSLCSRVLRAKYFPLGDCFRPKQT-SNVSYTWRSIQKGLRVLQNGMIWRVGDGSKINIWA 1192

Query: 531  DPWVKFLDRPVILGEVTDVVG*LEIKVSEFITP-DGQWDVGKLNE 400
            DPW+    R      +T     L  KV E I P  G WD   L++
Sbjct: 1193 DPWI---PRGWSRKPMTPRGANLVTKVEELIDPYTGTWDEDLLSQ 1234



 Score = 66.6 bits (161), Expect(2) = 7e-30
 Identities = 40/105 (38%), Positives = 53/105 (50%), Gaps = 10/105 (9%)
 Frame = -3

Query: 374  TVKSAFHVVVHLNRDHGQSSHDICAENS----------KCLWKFNIPPRIKLLIWKLAKN 225
            TVKSA+ V   + R   ++S + C   S          K LWK  +P +IK  +W++  N
Sbjct: 1268 TVKSAYKVQREMER---RASRNGCPGVSNWESGDDDFWKKLWKLGVPGKIKHFLWRMCHN 1324

Query: 224  MLPTVVNLRKHKMNVDPVCQMCGIVEESALHTFFKCQWVARVWFA 90
             L    NL    M+VD  C MCG   E A H FFKC+ V +VW A
Sbjct: 1325 TLALRANLHHRGMDVDTRCVMCGRYNEDAGHLFFKCKPVKKVWQA 1369


>gb|AAM18736.1|AC092548_14 putative reverse transcriptase [Oryza sativa Japonica Group]
          Length = 1509

 Score = 90.9 bits (224), Expect(2) = 7e-30
 Identities = 52/165 (31%), Positives = 82/165 (49%), Gaps = 1/165 (0%)
 Frame = -2

Query: 891  LDKVSRNFWWCGNSQGEGMHLATWDKICSPKKSGGLGLRLNHEFNLALVAKLYWKVLVEQ 712
            + K+   +WW    +   MH  +W+K+  PK  GGLG R  + FNLA++AK  W+++ + 
Sbjct: 1019 ISKMIAKYWWSNQEKDNKMHWLSWNKLTLPKNMGGLGFRDIYIFNLAMLAKQGWRLIQDP 1078

Query: 711  DSLWAKIMRAKYSKCLALFKPKEVPTNXXXXXXXXXXSRDVIKEGFLVCIGNGEDTFFWK 532
            DSL ++++RAKY      F+PK+  +N             V++ G +  +G+G     W 
Sbjct: 1079 DSLCSRVLRAKYFPLGDCFRPKQT-SNVSYTWRSIQKGLRVLQNGMIWRVGDGSKINIWA 1137

Query: 531  DPWVKFLDRPVILGEVTDVVG*LEIKVSEFITP-DGQWDVGKLNE 400
            DPW+    R      +T     L  KV E I P  G WD   L++
Sbjct: 1138 DPWI---PRGWSRKPMTPRGANLVTKVEELIDPYTGTWDEDLLSQ 1179



 Score = 66.6 bits (161), Expect(2) = 7e-30
 Identities = 40/105 (38%), Positives = 53/105 (50%), Gaps = 10/105 (9%)
 Frame = -3

Query: 374  TVKSAFHVVVHLNRDHGQSSHDICAENS----------KCLWKFNIPPRIKLLIWKLAKN 225
            TVKSA+ V   + R   ++S + C   S          K LWK  +P +IK  +W++  N
Sbjct: 1213 TVKSAYKVQREMER---RASRNGCPGVSNWESGDDDFWKKLWKLGVPGKIKHFLWRMCHN 1269

Query: 224  MLPTVVNLRKHKMNVDPVCQMCGIVEESALHTFFKCQWVARVWFA 90
             L    NL    M+VD  C MCG   E A H FFKC+ V +VW A
Sbjct: 1270 TLALRANLHHRGMDVDTRCVMCGRYNEDAGHLFFKCKPVKKVWQA 1314


>gb|AAP53315.2| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1505

 Score = 90.9 bits (224), Expect(2) = 7e-30
 Identities = 52/165 (31%), Positives = 82/165 (49%), Gaps = 1/165 (0%)
 Frame = -2

Query: 891  LDKVSRNFWWCGNSQGEGMHLATWDKICSPKKSGGLGLRLNHEFNLALVAKLYWKVLVEQ 712
            + K+   +WW    +   MH  +W+K+  PK  GGLG R  + FNLA++AK  W+++ + 
Sbjct: 1015 ISKMIAKYWWSNQEKDNKMHWLSWNKLTLPKNMGGLGFRDIYIFNLAMLAKQGWRLIQDP 1074

Query: 711  DSLWAKIMRAKYSKCLALFKPKEVPTNXXXXXXXXXXSRDVIKEGFLVCIGNGEDTFFWK 532
            DSL ++++RAKY      F+PK+  +N             V++ G +  +G+G     W 
Sbjct: 1075 DSLCSRVLRAKYFPLGDCFRPKQT-SNVSYTWRSIQKGLRVLQNGMIWRVGDGSKINIWA 1133

Query: 531  DPWVKFLDRPVILGEVTDVVG*LEIKVSEFITP-DGQWDVGKLNE 400
            DPW+    R      +T     L  KV E I P  G WD   L++
Sbjct: 1134 DPWI---PRGWSRKPMTPRGANLVTKVEELIDPYTGTWDEDLLSQ 1175



 Score = 66.6 bits (161), Expect(2) = 7e-30
 Identities = 40/105 (38%), Positives = 53/105 (50%), Gaps = 10/105 (9%)
 Frame = -3

Query: 374  TVKSAFHVVVHLNRDHGQSSHDICAENS----------KCLWKFNIPPRIKLLIWKLAKN 225
            TVKSA+ V   + R   ++S + C   S          K LWK  +P +IK  +W++  N
Sbjct: 1209 TVKSAYKVQREMER---RASRNGCPGVSNWESGDDDFWKKLWKLGVPGKIKHFLWRMCHN 1265

Query: 224  MLPTVVNLRKHKMNVDPVCQMCGIVEESALHTFFKCQWVARVWFA 90
             L    NL    M+VD  C MCG   E A H FFKC+ V +VW A
Sbjct: 1266 TLALRANLHHRGMDVDTRCVMCGRYNEDAGHLFFKCKPVKKVWQA 1310