BLASTX nr result

ID: Coptis21_contig00015669 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00015669
         (414 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268815.1| PREDICTED: ras-related protein RABA1d [Vitis...   203   1e-50
ref|XP_002522248.1| protein with unknown function [Ricinus commu...   202   3e-50
ref|XP_002317396.1| predicted protein [Populus trichocarpa] gi|2...   197   6e-49
ref|XP_002305729.1| predicted protein [Populus trichocarpa] gi|2...   197   7e-49
gb|ABK94149.1| unknown [Populus trichocarpa]                          196   2e-48

>ref|XP_002268815.1| PREDICTED: ras-related protein RABA1d [Vitis vinifera]
          Length = 218

 Score =  203 bits (517), Expect = 1e-50
 Identities = 104/114 (91%), Positives = 110/114 (96%), Gaps = 1/114 (0%)
 Frame = +3

Query: 3   ERWLKELRDHTDPNIVVMLIGNKSDLRHLVAVSTEDGKSFAERESLYFMETSALESTNVD 182
           ERWL+ELRDHTDPNIVVMLIGNKSDLRHLVAVSTEDGKSFAERESLYFMETSALE+TNVD
Sbjct: 105 ERWLRELRDHTDPNIVVMLIGNKSDLRHLVAVSTEDGKSFAERESLYFMETSALEATNVD 164

Query: 183 NAFAEVLTQIYHIVSKKAVEAGDDGAASAVPIKGEKINV-DDVSAVKRVGCCSS 341
           NAFAEVLTQIY IVSKKA+EAGDDGAASAVP KGEKI+V  DVSA+KRVGCCS+
Sbjct: 165 NAFAEVLTQIYRIVSKKAMEAGDDGAASAVPSKGEKIDVGKDVSAMKRVGCCSN 218


>ref|XP_002522248.1| protein with unknown function [Ricinus communis]
           gi|223538501|gb|EEF40106.1| protein with unknown
           function [Ricinus communis]
          Length = 218

 Score =  202 bits (513), Expect = 3e-50
 Identities = 103/114 (90%), Positives = 109/114 (95%), Gaps = 1/114 (0%)
 Frame = +3

Query: 3   ERWLKELRDHTDPNIVVMLIGNKSDLRHLVAVSTEDGKSFAERESLYFMETSALESTNVD 182
           ERWL+ELRDHTDPNIVVMLIGNKSDLRHLVAVSTEDGKSFAERESLYFMETSALE+TNVD
Sbjct: 105 ERWLRELRDHTDPNIVVMLIGNKSDLRHLVAVSTEDGKSFAERESLYFMETSALEATNVD 164

Query: 183 NAFAEVLTQIYHIVSKKAVEAGDDGAASAVPIKGEKINVD-DVSAVKRVGCCSS 341
           NAFAEVLTQIY IVSKKA+E GD+GAASAVP KGEKI+V  DVSA+KRVGCCSS
Sbjct: 165 NAFAEVLTQIYRIVSKKAMETGDEGAASAVPSKGEKIDVSKDVSAMKRVGCCSS 218


>ref|XP_002317396.1| predicted protein [Populus trichocarpa] gi|222860461|gb|EEE98008.1|
           predicted protein [Populus trichocarpa]
          Length = 218

 Score =  197 bits (502), Expect = 6e-49
 Identities = 101/114 (88%), Positives = 108/114 (94%), Gaps = 1/114 (0%)
 Frame = +3

Query: 3   ERWLKELRDHTDPNIVVMLIGNKSDLRHLVAVSTEDGKSFAERESLYFMETSALESTNVD 182
           ERWL+ELRDHTDPNIVVMLIGNKSDLRHLVAVSTEDGKSFAERESLYFMETSALE+TNVD
Sbjct: 105 ERWLRELRDHTDPNIVVMLIGNKSDLRHLVAVSTEDGKSFAERESLYFMETSALEATNVD 164

Query: 183 NAFAEVLTQIYHIVSKKAVEAGDDGAASAVPIKGEKINVD-DVSAVKRVGCCSS 341
           +AFAEVLTQIY IVSKKA+E GD+ AASAVP KGEKI+V  DVSA+KRVGCCSS
Sbjct: 165 SAFAEVLTQIYRIVSKKAMETGDEAAASAVPSKGEKIDVSKDVSAMKRVGCCSS 218


>ref|XP_002305729.1| predicted protein [Populus trichocarpa] gi|222848693|gb|EEE86240.1|
           predicted protein [Populus trichocarpa]
          Length = 218

 Score =  197 bits (501), Expect = 7e-49
 Identities = 101/114 (88%), Positives = 108/114 (94%), Gaps = 1/114 (0%)
 Frame = +3

Query: 3   ERWLKELRDHTDPNIVVMLIGNKSDLRHLVAVSTEDGKSFAERESLYFMETSALESTNVD 182
           ERWL+ELRDHTDPNIVVMLIGNKSDLRHLVAVSTEDGKSFAERESLYFMETSALE+TNVD
Sbjct: 105 ERWLRELRDHTDPNIVVMLIGNKSDLRHLVAVSTEDGKSFAERESLYFMETSALEATNVD 164

Query: 183 NAFAEVLTQIYHIVSKKAVEAGDDGAASAVPIKGEKINVD-DVSAVKRVGCCSS 341
           NAFAEVL QIY IVSKKA+E GD+ AASAVP KGEKI+V+ DVSA+KRVGCCSS
Sbjct: 165 NAFAEVLNQIYSIVSKKAMETGDNAAASAVPSKGEKIDVNKDVSAMKRVGCCSS 218


>gb|ABK94149.1| unknown [Populus trichocarpa]
          Length = 218

 Score =  196 bits (498), Expect = 2e-48
 Identities = 101/114 (88%), Positives = 107/114 (93%), Gaps = 1/114 (0%)
 Frame = +3

Query: 3   ERWLKELRDHTDPNIVVMLIGNKSDLRHLVAVSTEDGKSFAERESLYFMETSALESTNVD 182
           ERWL+ELRDHTDPNIVVMLIGNKSDLRHLVAVSTEDGKSFAERESLYFMETSALE+TNVD
Sbjct: 105 ERWLRELRDHTDPNIVVMLIGNKSDLRHLVAVSTEDGKSFAERESLYFMETSALEATNVD 164

Query: 183 NAFAEVLTQIYHIVSKKAVEAGDDGAASAVPIKGEKINVD-DVSAVKRVGCCSS 341
           NAFAEVL QIY IVSKKA+E GD+ AASAVP KGEKI+V+ DVSA KRVGCCSS
Sbjct: 165 NAFAEVLNQIYSIVSKKAMETGDNAAASAVPSKGEKIDVNKDVSAKKRVGCCSS 218


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