BLASTX nr result
ID: Coptis21_contig00015668
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00015668 (822 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002515468.1| conserved hypothetical protein [Ricinus comm... 62 1e-07 ref|XP_002869295.1| neurochondrin family protein [Arabidopsis ly... 62 2e-07 ref|XP_002283008.2| PREDICTED: neurochondrin-like [Vitis vinifera] 60 4e-07 emb|CBI21102.3| unnamed protein product [Vitis vinifera] 60 4e-07 ref|XP_002324889.1| predicted protein [Populus trichocarpa] gi|2... 58 3e-06 >ref|XP_002515468.1| conserved hypothetical protein [Ricinus communis] gi|223545412|gb|EEF46917.1| conserved hypothetical protein [Ricinus communis] Length = 631 Score = 62.4 bits (150), Expect = 1e-07 Identities = 32/54 (59%), Positives = 39/54 (72%) Frame = -3 Query: 811 DPSLITMASCICTLIFDSTSEEALLSHLDFKLNTLNSLTRLIAKSLRTCGQDQS 650 DPS++ MAS IC LIFD TSE+ALL H F ++L SL+R+IAKSL QD S Sbjct: 544 DPSVLMMASSICALIFDYTSEQALLCHPKFNSSSLESLSRIIAKSLALLKQDMS 597 >ref|XP_002869295.1| neurochondrin family protein [Arabidopsis lyrata subsp. lyrata] gi|297315131|gb|EFH45554.1| neurochondrin family protein [Arabidopsis lyrata subsp. lyrata] Length = 621 Score = 61.6 bits (148), Expect = 2e-07 Identities = 33/75 (44%), Positives = 47/75 (62%), Gaps = 1/75 (1%) Frame = -3 Query: 811 DPSLITMASCICTLIFDSTSEEALLSHLDFKLNTLNSLTRLIAKSLRTCGQDQSRRASSQ 632 D S++ A+ IC+LIFD TSE+ALL +F ++++SL RLI +SL +CGQD S A Sbjct: 538 DHSVVMTAASICSLIFDFTSEDALLKQPNFNSSSMDSLARLITRSLSSCGQDMSDTADLL 597 Query: 631 D-YHCSLNRWISYKP 590 + +RWI P Sbjct: 598 EIITAGYSRWIDRFP 612 >ref|XP_002283008.2| PREDICTED: neurochondrin-like [Vitis vinifera] Length = 629 Score = 60.5 bits (145), Expect = 4e-07 Identities = 28/52 (53%), Positives = 40/52 (76%) Frame = -3 Query: 811 DPSLITMASCICTLIFDSTSEEALLSHLDFKLNTLNSLTRLIAKSLRTCGQD 656 +PS++ MAS IC LIFD TSE+ALL+H + +T+ SL++LI +SL TC Q+ Sbjct: 541 EPSIVMMASSICALIFDHTSEQALLNHPNIDHSTIASLSQLIVRSLATCAQN 592 >emb|CBI21102.3| unnamed protein product [Vitis vinifera] Length = 713 Score = 60.5 bits (145), Expect = 4e-07 Identities = 28/52 (53%), Positives = 40/52 (76%) Frame = -3 Query: 811 DPSLITMASCICTLIFDSTSEEALLSHLDFKLNTLNSLTRLIAKSLRTCGQD 656 +PS++ MAS IC LIFD TSE+ALL+H + +T+ SL++LI +SL TC Q+ Sbjct: 625 EPSIVMMASSICALIFDHTSEQALLNHPNIDHSTIASLSQLIVRSLATCAQN 676 >ref|XP_002324889.1| predicted protein [Populus trichocarpa] gi|222866323|gb|EEF03454.1| predicted protein [Populus trichocarpa] Length = 618 Score = 57.8 bits (138), Expect = 3e-06 Identities = 29/54 (53%), Positives = 40/54 (74%) Frame = -3 Query: 811 DPSLITMASCICTLIFDSTSEEALLSHLDFKLNTLNSLTRLIAKSLRTCGQDQS 650 D S+I MAS IC LIFD TSEE LL+H + ++L++L ++IA+SL +C QD S Sbjct: 538 DLSVIIMASSICALIFDYTSEETLLNHPNLDNSSLHNLYKIIARSLASCKQDMS 591