BLASTX nr result
ID: Coptis21_contig00015662
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00015662 (584 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002311188.1| predicted protein [Populus trichocarpa] gi|2... 152 3e-35 ref|XP_004150638.1| PREDICTED: E3 ubiquitin-protein ligase HERC2... 150 2e-34 emb|CBI31619.3| unnamed protein product [Vitis vinifera] 149 3e-34 ref|XP_002282470.1| PREDICTED: X-linked retinitis pigmentosa GTP... 149 3e-34 ref|XP_002524221.1| Serine/threonine-protein kinase Nek8, putati... 148 7e-34 >ref|XP_002311188.1| predicted protein [Populus trichocarpa] gi|222851008|gb|EEE88555.1| predicted protein [Populus trichocarpa] Length = 148 Score = 152 bits (385), Expect = 3e-35 Identities = 65/86 (75%), Positives = 77/86 (89%) Frame = +3 Query: 3 ETLPRVLEAASMEDKHAKVVSCGARHTAVVTDDGNVFCWGWNKYGQLGLGDLIDRNTPSQ 182 ETLPR+LEA S+E+ HAK +SCGARH+ ++++DG VFCWGWNKYGQLGLGD+IDRN PSQ Sbjct: 63 ETLPRLLEAPSLENIHAKTISCGARHSTIISEDGKVFCWGWNKYGQLGLGDVIDRNVPSQ 122 Query: 183 VPMDGHLSKNVACGWWHTLLLAESPT 260 V +DG + KNVACGWWHTLLLAESPT Sbjct: 123 VTIDGCVPKNVACGWWHTLLLAESPT 148 >ref|XP_004150638.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Cucumis sativus] gi|449516435|ref|XP_004165252.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Cucumis sativus] Length = 491 Score = 150 bits (378), Expect = 2e-34 Identities = 66/86 (76%), Positives = 78/86 (90%) Frame = +3 Query: 3 ETLPRVLEAASMEDKHAKVVSCGARHTAVVTDDGNVFCWGWNKYGQLGLGDLIDRNTPSQ 182 ETLPR+L+A S+E+ +AKVVSCGARH+A+V++DG VFCWGWNKYGQLGLGD+IDRN P + Sbjct: 406 ETLPRLLDAPSVENVNAKVVSCGARHSAIVSEDGKVFCWGWNKYGQLGLGDVIDRNIPVE 465 Query: 183 VPMDGHLSKNVACGWWHTLLLAESPT 260 VPM+ SKNVACGWWHTLLLAESPT Sbjct: 466 VPMENCNSKNVACGWWHTLLLAESPT 491 Score = 55.8 bits (133), Expect = 5e-06 Identities = 27/76 (35%), Positives = 44/76 (57%), Gaps = 1/76 (1%) Frame = +3 Query: 24 EAASMEDKHAKVVSCGARHTAVVTDDGNVFCWGWNKYGQLGLGDLIDRNTPSQV-PMDGH 200 + + + + K ++CG RH+A VTD G + +GW YGQ G G D +P+ V + G Sbjct: 307 QGSRIPGSYVKGIACGGRHSAAVTDAGALLTFGWGLYGQCGQGCTDDELSPTCVSSLLGI 366 Query: 201 LSKNVACGWWHTLLLA 248 ++VA G WHT+ ++ Sbjct: 367 RIESVAAGLWHTVCIS 382 >emb|CBI31619.3| unnamed protein product [Vitis vinifera] Length = 461 Score = 149 bits (376), Expect = 3e-34 Identities = 64/86 (74%), Positives = 76/86 (88%) Frame = +3 Query: 3 ETLPRVLEAASMEDKHAKVVSCGARHTAVVTDDGNVFCWGWNKYGQLGLGDLIDRNTPSQ 182 ETLPR+L+A S+E+ HAK+VSCGARH+A++T DG +F WGWNKYGQLGLGD++DRN PSQ Sbjct: 376 ETLPRLLDAPSLENAHAKIVSCGARHSAIITADGKMFSWGWNKYGQLGLGDVVDRNIPSQ 435 Query: 183 VPMDGHLSKNVACGWWHTLLLAESPT 260 V +DG KNVACGWWHTLLLAESPT Sbjct: 436 VTLDGCTPKNVACGWWHTLLLAESPT 461 Score = 57.4 bits (137), Expect = 2e-06 Identities = 27/68 (39%), Positives = 41/68 (60%), Gaps = 1/68 (1%) Frame = +3 Query: 48 HAKVVSCGARHTAVVTDDGNVFCWGWNKYGQLGLGDLIDRNTPSQV-PMDGHLSKNVACG 224 + K ++CG RH+AV+TD G + +GW YGQ G G D +P+ V + G + VA G Sbjct: 285 YVKWIACGGRHSAVITDAGALLMFGWGLYGQCGQGSTDDELSPTCVSSLLGIQIERVAAG 344 Query: 225 WWHTLLLA 248 WHT+ ++ Sbjct: 345 LWHTVCIS 352 >ref|XP_002282470.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator [Vitis vinifera] Length = 484 Score = 149 bits (376), Expect = 3e-34 Identities = 64/86 (74%), Positives = 76/86 (88%) Frame = +3 Query: 3 ETLPRVLEAASMEDKHAKVVSCGARHTAVVTDDGNVFCWGWNKYGQLGLGDLIDRNTPSQ 182 ETLPR+L+A S+E+ HAK+VSCGARH+A++T DG +F WGWNKYGQLGLGD++DRN PSQ Sbjct: 399 ETLPRLLDAPSLENAHAKIVSCGARHSAIITADGKMFSWGWNKYGQLGLGDVVDRNIPSQ 458 Query: 183 VPMDGHLSKNVACGWWHTLLLAESPT 260 V +DG KNVACGWWHTLLLAESPT Sbjct: 459 VTLDGCTPKNVACGWWHTLLLAESPT 484 Score = 57.4 bits (137), Expect = 2e-06 Identities = 27/68 (39%), Positives = 41/68 (60%), Gaps = 1/68 (1%) Frame = +3 Query: 48 HAKVVSCGARHTAVVTDDGNVFCWGWNKYGQLGLGDLIDRNTPSQV-PMDGHLSKNVACG 224 + K ++CG RH+AV+TD G + +GW YGQ G G D +P+ V + G + VA G Sbjct: 308 YVKWIACGGRHSAVITDAGALLMFGWGLYGQCGQGSTDDELSPTCVSSLLGIQIERVAAG 367 Query: 225 WWHTLLLA 248 WHT+ ++ Sbjct: 368 LWHTVCIS 375 >ref|XP_002524221.1| Serine/threonine-protein kinase Nek8, putative [Ricinus communis] gi|223536498|gb|EEF38145.1| Serine/threonine-protein kinase Nek8, putative [Ricinus communis] Length = 476 Score = 148 bits (373), Expect = 7e-34 Identities = 64/85 (75%), Positives = 75/85 (88%) Frame = +3 Query: 3 ETLPRVLEAASMEDKHAKVVSCGARHTAVVTDDGNVFCWGWNKYGQLGLGDLIDRNTPSQ 182 ET PR+L+A S+ED HAKVVSCGARH+A+V +DG VFCWGWNKYGQLGLGD+IDRN PS Sbjct: 391 ETTPRLLDAPSLEDIHAKVVSCGARHSAIVAEDGKVFCWGWNKYGQLGLGDVIDRNIPSP 450 Query: 183 VPMDGHLSKNVACGWWHTLLLAESP 257 V ++G + +NVACGWWHTLLLAESP Sbjct: 451 VTIEGCIPRNVACGWWHTLLLAESP 475 Score = 58.9 bits (141), Expect = 6e-07 Identities = 41/132 (31%), Positives = 64/132 (48%), Gaps = 6/132 (4%) Frame = +3 Query: 48 HAKVVSCGARHTAVVTDDGNVFCWGWNKYGQLGLGDLIDRNTPSQV-PMDGHLSKNVACG 224 + K ++CG RH+AV+TD G + +GW YGQ G G D +P V P+ G VA G Sbjct: 300 YVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPICVSPLLGIRIAGVAAG 359 Query: 225 WWHTLLLAESPT*V---GQQNPAMVNSFVRIDSSLPLIDAVSMYAFCMCMYICVHIYIYT 395 WHT+ ++ G Q + + +++ L+DA S+ +H + + Sbjct: 360 LWHTICVSADGDVYAFGGNQFGQLGTGSDQAETTPRLLDAPSLED--------IHAKVVS 411 Query: 396 C--VHSFMVKED 425 C HS +V ED Sbjct: 412 CGARHSAIVAED 423