BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00015659
         (799 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN66439.1| hypothetical protein VITISV_035236 [Vitis vinifera]   268   8e-70
ref|XP_002280293.2| PREDICTED: endoribonuclease Dicer homolog 3a...   268   1e-69
emb|CBI20740.3| unnamed protein product [Vitis vinifera]              268   1e-69
ref|XP_002516160.1| Ribonuclease III, putative [Ricinus communis...   264   1e-68
ref|XP_002324204.1| dicer-like protein [Populus trichocarpa] gi|...   257   2e-66

>emb|CAN66439.1| hypothetical protein VITISV_035236 [Vitis vinifera]
          Length = 2076

 Score =  268 bits (686), Expect = 8e-70
 Identities = 144/278 (51%), Positives = 183/278 (65%), Gaps = 15/278 (5%)
 Frame = -1

Query: 793  QKLIGHKARNTHLAKQLACLEACKELHRSGALDDHLLPSVEEPSADDTIKVNRDYSSGVG 614
            Q +IG   +N+HL+KQL CLEACK+LH+ GALDDHLLP VEEPS +D I  ++  ++G G
Sbjct: 1640 QTIIGPGNKNSHLSKQLVCLEACKKLHQMGALDDHLLPYVEEPSENDIIVKSKGSAAGAG 1699

Query: 613  TTKRKELHGTTTARALCGSWGDITDGISLHAYRIDFSCSLADEFYSGFVLLIEANLDDEV 434
            TTKRKELHGTT   AL G+WGD  DG    AY+IDFSC++ +E YSGFVLLIE+ LDD+V
Sbjct: 1700 TTKRKELHGTTQTCALSGTWGDKIDGAIFQAYKIDFSCNIVNELYSGFVLLIESKLDDDV 1759

Query: 433  ANAEIELFLTDKFVKSSVSPCGQLHLNADQVKYAQLFQEFLFNGIFGKLFIGSRSSGTPR 254
             N E+EL+L  KFV++SVS CGQ+ L+A+QV  A  F E  FN +FG+LFIGS+SSG  R
Sbjct: 1760 GNIEMELYLISKFVRTSVSSCGQVSLDAEQVMKAMXFHELFFNSLFGRLFIGSKSSGVRR 1819

Query: 253  EFLLMKENKXXXXXXXXXXXLPVE-SHIPIRDSLEINWRGINACASAVEFVKEHYSAVEH 77
            EFLL  + K           LP+E S+IP  +S  INW GIN+CAS VEF+++       
Sbjct: 1820 EFLLNTQQKSLWSSSNMYLLLPIESSNIPSDESWRINWPGINSCASVVEFLEKR----SQ 1875

Query: 76   LPTRAHD--------------EAECKNSKFIFLANTSV 5
            L T   +              E ECK+   + LAN SV
Sbjct: 1876 LSTGNMNDDTGNPSPCSTGLVETECKSISTVHLANNSV 1913


>ref|XP_002280293.2| PREDICTED: endoribonuclease Dicer homolog 3a-like [Vitis vinifera]
          Length = 1648

 Score =  268 bits (685), Expect = 1e-69
 Identities = 144/278 (51%), Positives = 183/278 (65%), Gaps = 15/278 (5%)
 Frame = -1

Query: 793  QKLIGHKARNTHLAKQLACLEACKELHRSGALDDHLLPSVEEPSADDTIKVNRDYSSGVG 614
            Q +IG   +N+HL+KQL CLEACK+LH+ GALDDHLLP VEEPS +D I  ++  ++G G
Sbjct: 631  QTIIGPGNKNSHLSKQLVCLEACKKLHQMGALDDHLLPYVEEPSENDIIVKSKGSAAGAG 690

Query: 613  TTKRKELHGTTTARALCGSWGDITDGISLHAYRIDFSCSLADEFYSGFVLLIEANLDDEV 434
            TTKRKELHGTT   AL G+WGD  DG    AY+IDFSC++ +E YSGFVLLIE+ LDD+V
Sbjct: 691  TTKRKELHGTTQTCALSGTWGDKIDGAIFQAYKIDFSCNIVNELYSGFVLLIESKLDDDV 750

Query: 433  ANAEIELFLTDKFVKSSVSPCGQLHLNADQVKYAQLFQEFLFNGIFGKLFIGSRSSGTPR 254
             N E+EL+L  KFV++SVS CGQ+ L+A+QV  A  F E  FN +FG+LFIGS+SSG  R
Sbjct: 751  GNIEMELYLISKFVRTSVSSCGQVSLDAEQVMKAMRFHELFFNSLFGRLFIGSKSSGVRR 810

Query: 253  EFLLMKENKXXXXXXXXXXXLPVE-SHIPIRDSLEINWRGINACASAVEFVKEHYSAVEH 77
            EFLL  + K           LP+E S+IP  +S  INW GIN+CAS VEF+++       
Sbjct: 811  EFLLNTQQKSLWSSSNMYLLLPIESSNIPSDESWRINWPGINSCASVVEFLEKR----SQ 866

Query: 76   LPTRAHD--------------EAECKNSKFIFLANTSV 5
            L T   +              E ECK+   + LAN SV
Sbjct: 867  LSTGNMNDDTGNPSPCSTGLVETECKSISTVHLANNSV 904


>emb|CBI20740.3| unnamed protein product [Vitis vinifera]
          Length = 1688

 Score =  268 bits (685), Expect = 1e-69
 Identities = 144/278 (51%), Positives = 183/278 (65%), Gaps = 15/278 (5%)
 Frame = -1

Query: 793  QKLIGHKARNTHLAKQLACLEACKELHRSGALDDHLLPSVEEPSADDTIKVNRDYSSGVG 614
            Q +IG   +N+HL+KQL CLEACK+LH+ GALDDHLLP VEEPS +D I  ++  ++G G
Sbjct: 639  QTIIGPGNKNSHLSKQLVCLEACKKLHQMGALDDHLLPYVEEPSENDIIVKSKGSAAGAG 698

Query: 613  TTKRKELHGTTTARALCGSWGDITDGISLHAYRIDFSCSLADEFYSGFVLLIEANLDDEV 434
            TTKRKELHGTT   AL G+WGD  DG    AY+IDFSC++ +E YSGFVLLIE+ LDD+V
Sbjct: 699  TTKRKELHGTTQTCALSGTWGDKIDGAIFQAYKIDFSCNIVNELYSGFVLLIESKLDDDV 758

Query: 433  ANAEIELFLTDKFVKSSVSPCGQLHLNADQVKYAQLFQEFLFNGIFGKLFIGSRSSGTPR 254
             N E+EL+L  KFV++SVS CGQ+ L+A+QV  A  F E  FN +FG+LFIGS+SSG  R
Sbjct: 759  GNIEMELYLISKFVRTSVSSCGQVSLDAEQVMKAMRFHELFFNSLFGRLFIGSKSSGVRR 818

Query: 253  EFLLMKENKXXXXXXXXXXXLPVE-SHIPIRDSLEINWRGINACASAVEFVKEHYSAVEH 77
            EFLL  + K           LP+E S+IP  +S  INW GIN+CAS VEF+++       
Sbjct: 819  EFLLNTQQKSLWSSSNMYLLLPIESSNIPSDESWRINWPGINSCASVVEFLEKR----SQ 874

Query: 76   LPTRAHD--------------EAECKNSKFIFLANTSV 5
            L T   +              E ECK+   + LAN SV
Sbjct: 875  LSTGNMNDDTGNPSPCSTGLVETECKSISTVHLANNSV 912


>ref|XP_002516160.1| Ribonuclease III, putative [Ricinus communis]
            gi|223544646|gb|EEF46162.1| Ribonuclease III, putative
            [Ricinus communis]
          Length = 1660

 Score =  264 bits (675), Expect = 1e-68
 Identities = 136/267 (50%), Positives = 176/267 (65%), Gaps = 4/267 (1%)
 Frame = -1

Query: 793  QKLIGHKARNTHLAKQLACLEACKELHRSGALDDHLLPSVEEPSADDTIKVNRDYSSGVG 614
            Q ++G   R+  LAKQLACLEACK+LH+ GALDDHLLPSVEEP+ DD     +   +G G
Sbjct: 646  QTIVGPVCRSQQLAKQLACLEACKQLHQMGALDDHLLPSVEEPTEDDHTVRRKGSLAGAG 705

Query: 613  TTKRKELHGTTTARALCGSWGDITDGISLHAYRIDFSCSLADEFYSGFVLLIEANLDDEV 434
            TTKRKELHGTT   AL GSWG+  DG + HAY+ +FSCS+  E YSG++LLIE+ LDD+V
Sbjct: 706  TTKRKELHGTTPIHALSGSWGENLDGATFHAYKFEFSCSIVSEKYSGYILLIESKLDDDV 765

Query: 433  ANAEIELFLTDKFVKSSVSPCGQLHLNADQVKYAQLFQEFLFNGIFGKLFIGSRSSGTPR 254
             N E++LFL  K V++SVS CGQ+HL+A+Q+  A+ F E  FN +FGKLF GS+SS +PR
Sbjct: 766  GNIELDLFLVRKTVRASVSSCGQVHLDAEQMMKAKCFHELFFNALFGKLFSGSKSSRSPR 825

Query: 253  EFLLMKENKXXXXXXXXXXXLPVESHIPIRD-SLEINWRGINACASAVEFVKEH-YSAVE 80
            EFLL KE             LP+E+     D S +INWRG+N C++ VEF+K++ +   E
Sbjct: 826  EFLLQKETSLLWILSNMYLLLPLEAFSASSDESWKINWRGVNGCSNVVEFLKKNCFLGAE 885

Query: 79   HLPTR--AHDEAECKNSKFIFLANTSV 5
            H           EC     +  AN SV
Sbjct: 886  HYNGERVRSSVTECSGGNAVHFANISV 912


>ref|XP_002324204.1| dicer-like protein [Populus trichocarpa] gi|222865638|gb|EEF02769.1|
            dicer-like protein [Populus trichocarpa]
          Length = 1492

 Score =  257 bits (657), Expect = 2e-66
 Identities = 139/272 (51%), Positives = 173/272 (63%), Gaps = 9/272 (3%)
 Frame = -1

Query: 793  QKLIGHKARNTHLAKQLACLEACKELHRSGALDDHLLPSVEEPSADDTIKVNRDYSSGVG 614
            Q L+G   RN  LAKQL CLEACK+LH+ GALDDHLLPSVEEPS    +K ++  S+G G
Sbjct: 500  QTLVGPTCRNQQLAKQLVCLEACKKLHQMGALDDHLLPSVEEPSEIAVVK-SKSTSAGAG 558

Query: 613  TTKRKELHGTTTARALCGSWGDITDGISLHAYRIDFSCSLADEFYSGFVLLIEANLDDEV 434
            TTKRKELHGT    AL GSWG+  DG + HAY+ DFSCS+  + YSGF+LLIE+ LDD+V
Sbjct: 559  TTKRKELHGTACIHALSGSWGEKLDGATFHAYKFDFSCSIVSQIYSGFILLIESKLDDDV 618

Query: 433  ANAEIELFLTDKFVKSSVSPCGQLHLNADQVKYAQLFQEFLFNGIFGKLFIGSRSSGTPR 254
             N E++L+L  K VKSS+S CG +HL+A Q+  A+ FQEF FNG+FGKLF GS+SS   R
Sbjct: 619  GNIELDLYLVAKIVKSSISSCGVVHLDAAQMTKAKRFQEFFFNGLFGKLFTGSKSS---R 675

Query: 253  EFLLMKENKXXXXXXXXXXXLPVES-HIPIRDSLEINWRGINACASAVEFVKEHYSAVEH 77
            EFLL KE             LP+E   I   D  +I+W+GI AC+S VE++K  + A   
Sbjct: 676  EFLLQKETTLLWSPSNMYLLLPLEPWSISSNDWCKIDWKGIEACSSVVEYLKNSFLAARS 735

Query: 76   -------LPTRAHDEA-ECKNSKFIFLANTSV 5
                   LP        EC  +  I  AN  V
Sbjct: 736  YSGGGNPLPDNVQSSTIECNGTNLIHFANALV 767