BLASTX nr result

ID: Coptis21_contig00015643 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00015643
         (275 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270683.1| PREDICTED: SNF1-related protein kinase regul...    62   6e-08
emb|CAN73518.1| hypothetical protein VITISV_033732 [Vitis vinifera]    62   6e-08
gb|AEP68531.1| Gal83 [Solanum lycopersicum]                            60   2e-07
gb|AGF39570.1| beta subunit of SnRK1, partial [Solanum berthaultii]    59   3e-07
gb|ABB02617.1| GAL83-like protein [Solanum tuberosum]                  59   3e-07

>ref|XP_002270683.1| PREDICTED: SNF1-related protein kinase regulatory subunit beta-1
           [Vitis vinifera] gi|296083943|emb|CBI24331.3| unnamed
           protein product [Vitis vinifera]
          Length = 286

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 29/40 (72%), Positives = 35/40 (87%), Gaps = 1/40 (2%)
 Frame = +3

Query: 3   LHLTLLGTQNNPEPS-TKPQHVVLNHLYIDKGWPSQSLVA 119
           LHLT+LG  N+ EPS +KPQHVVLNHL+I+KGW SQS+VA
Sbjct: 225 LHLTVLGMPNSEEPSCSKPQHVVLNHLFIEKGWASQSVVA 264


>emb|CAN73518.1| hypothetical protein VITISV_033732 [Vitis vinifera]
          Length = 447

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 29/40 (72%), Positives = 35/40 (87%), Gaps = 1/40 (2%)
 Frame = +3

Query: 3   LHLTLLGTQNNPEPS-TKPQHVVLNHLYIDKGWPSQSLVA 119
           LHLT+LG  N+ EPS +KPQHVVLNHL+I+KGW SQS+VA
Sbjct: 276 LHLTVLGMPNSEEPSCSKPQHVVLNHLFIEKGWASQSVVA 315


>gb|AEP68531.1| Gal83 [Solanum lycopersicum]
          Length = 289

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 28/41 (68%), Positives = 35/41 (85%), Gaps = 2/41 (4%)
 Frame = +3

Query: 3   LHLTLLGTQNNPEP--STKPQHVVLNHLYIDKGWPSQSLVA 119
           LHLT+LG++N+ E   S KPQHVVLNHL+I+KGW SQS+VA
Sbjct: 227 LHLTVLGSENSEEAPSSPKPQHVVLNHLFIEKGWASQSIVA 267


>gb|AGF39570.1| beta subunit of SnRK1, partial [Solanum berthaultii]
          Length = 285

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 28/41 (68%), Positives = 35/41 (85%), Gaps = 2/41 (4%)
 Frame = +3

Query: 3   LHLTLLGTQNNPEP--STKPQHVVLNHLYIDKGWPSQSLVA 119
           LHLT+LG++N+ E   S KPQHVVLNHL+I+KGW SQS+VA
Sbjct: 218 LHLTVLGSENSEEAPSSPKPQHVVLNHLFIEKGWASQSVVA 258


>gb|ABB02617.1| GAL83-like protein [Solanum tuberosum]
          Length = 287

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 28/41 (68%), Positives = 35/41 (85%), Gaps = 2/41 (4%)
 Frame = +3

Query: 3   LHLTLLGTQNNPEP--STKPQHVVLNHLYIDKGWPSQSLVA 119
           LHLT+LG++N+ E   S KPQHVVLNHL+I+KGW SQS+VA
Sbjct: 225 LHLTVLGSENSEEAPSSPKPQHVVLNHLFIEKGWASQSVVA 265


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