BLASTX nr result

ID: Coptis21_contig00015637 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00015637
         (303 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABA81866.1| unknown [Solanum tuberosum]                             55   6e-06

>gb|ABA81866.1| unknown [Solanum tuberosum]
          Length = 236

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 37/93 (39%), Positives = 47/93 (50%), Gaps = 3/93 (3%)
 Frame = -3

Query: 301 IIGGLQEMRKN-PLDAYRNAAMLGLIGGLEGTVANMRNKEDSWNWFFAGATAGAISEMRH 125
           +IGG Q +R N P      A   GL    + T+  +R KED WN   AGA  G   +MR 
Sbjct: 48  LIGGTQAVRMNAPRIGGSFAVWGGLFSTFDCTMVYLRQKEDPWNSIIAGAATGGFLQMRQ 107

Query: 124 GLGPAFKFAMFLGVGGAM--AAEFLLPKKFKSP 32
           GLG A + AMF GV  A+   A  +L K   +P
Sbjct: 108 GLGAASRSAMFGGVLLALIEGAGIMLNKVMSAP 140


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