BLASTX nr result

ID: Coptis21_contig00015633 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00015633
         (297 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002519749.1| phytochrome B, putative [Ricinus communis] g...   159   3e-37
gb|AAU12404.1| PHYC [Drypetes madagascariensis]                       156   1e-36
gb|AEW26873.1| phytochrome P [Dioon purpusii]                         155   2e-36
gb|AEW26871.1| phytochrome P [Dioon edule]                            155   2e-36
gb|AEW26950.1| phytochrome P [Macrozamia stenomera]                   155   3e-36

>ref|XP_002519749.1| phytochrome B, putative [Ricinus communis]
           gi|223541166|gb|EEF42722.1| phytochrome B, putative
           [Ricinus communis]
          Length = 1131

 Score =  159 bits (401), Expect = 3e-37
 Identities = 68/99 (68%), Positives = 86/99 (86%)
 Frame = +1

Query: 1   CNCRANPVRVIRSVELERPLVLVNSTLRAPHGCHAEYMANMGSVGTLLMAIMVNENNIMK 180
           C+C ANPVRVI+S EL+ PL LVNSTLR+PHGCH +YMANMGS+ +L+MA+++N N+  K
Sbjct: 299 CDCHANPVRVIQSEELKHPLCLVNSTLRSPHGCHTQYMANMGSIASLVMAVVINGNDSTK 358

Query: 181 LWGLVSCHHVSPRYIPYPIRHACEFMMQAFGLQLSIECQ 297
           LWGLV CHH SPRY+P+P+R+ACEF+MQAFGLQL +E Q
Sbjct: 359 LWGLVVCHHTSPRYVPFPLRYACEFLMQAFGLQLYMELQ 397


>gb|AAU12404.1| PHYC [Drypetes madagascariensis]
          Length = 204

 Score =  156 bits (395), Expect = 1e-36
 Identities = 65/99 (65%), Positives = 87/99 (87%)
 Frame = +1

Query: 1   CNCRANPVRVIRSVELERPLVLVNSTLRAPHGCHAEYMANMGSVGTLLMAIMVNENNIMK 180
           C+C A+PVR+I+S E+++PL+LVNSTLR+PHGCH +YM NMGS+ +L+MA+++N NN  K
Sbjct: 20  CDCNADPVRLIQSEEIKQPLLLVNSTLRSPHGCHTQYMTNMGSIASLVMAVVINGNNSSK 79

Query: 181 LWGLVSCHHVSPRYIPYPIRHACEFMMQAFGLQLSIECQ 297
           LWGLV CHH SPRY+P+P+R+ACEF+MQAFGLQL +E Q
Sbjct: 80  LWGLVVCHHTSPRYVPFPLRYACEFLMQAFGLQLYMELQ 118


>gb|AEW26873.1| phytochrome P [Dioon purpusii]
          Length = 590

 Score =  155 bits (393), Expect = 2e-36
 Identities = 69/99 (69%), Positives = 86/99 (86%)
 Frame = +1

Query: 1   CNCRANPVRVIRSVELERPLVLVNSTLRAPHGCHAEYMANMGSVGTLLMAIMVNENNIMK 180
           C+CRA PVRV+++ EL RPL LV STLRAPHGCHA+YMANMGS+ +L+MA++VN N  MK
Sbjct: 210 CDCRATPVRVVQAAELRRPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVVNGN--MK 267

Query: 181 LWGLVSCHHVSPRYIPYPIRHACEFMMQAFGLQLSIECQ 297
           LWGLV CHH SPR +P+P+R+ACEF+MQAFGLQL++E Q
Sbjct: 268 LWGLVVCHHTSPRAVPFPVRYACEFLMQAFGLQLNMELQ 306


>gb|AEW26871.1| phytochrome P [Dioon edule]
          Length = 590

 Score =  155 bits (393), Expect = 2e-36
 Identities = 69/99 (69%), Positives = 86/99 (86%)
 Frame = +1

Query: 1   CNCRANPVRVIRSVELERPLVLVNSTLRAPHGCHAEYMANMGSVGTLLMAIMVNENNIMK 180
           C+CRA PVRV+++ EL +PL LV STLRAPHGCHA+YMANMGS+ TL+MA++VN N  MK
Sbjct: 210 CDCRATPVRVVQAAELRQPLCLVGSTLRAPHGCHAQYMANMGSIATLVMAVVVNGN--MK 267

Query: 181 LWGLVSCHHVSPRYIPYPIRHACEFMMQAFGLQLSIECQ 297
           LWGLV CHH SPR +P+P+R+ACEF+MQAFGLQL++E Q
Sbjct: 268 LWGLVVCHHTSPRAVPFPVRYACEFLMQAFGLQLNMELQ 306


>gb|AEW26950.1| phytochrome P [Macrozamia stenomera]
          Length = 590

 Score =  155 bits (392), Expect = 3e-36
 Identities = 69/99 (69%), Positives = 86/99 (86%)
 Frame = +1

Query: 1   CNCRANPVRVIRSVELERPLVLVNSTLRAPHGCHAEYMANMGSVGTLLMAIMVNENNIMK 180
           C+CRA PVRVI++ EL RPL LV STLRAPHGCHA+YMANMGS+ +L+MA+++N N  MK
Sbjct: 210 CDCRATPVRVIQAAELRRPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVVINGN--MK 267

Query: 181 LWGLVSCHHVSPRYIPYPIRHACEFMMQAFGLQLSIECQ 297
           LWGLV CHH SPR +P+P+R+ACEF+MQAFGLQL++E Q
Sbjct: 268 LWGLVVCHHTSPRAVPFPLRYACEFLMQAFGLQLNMELQ 306


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