BLASTX nr result

ID: Coptis21_contig00015625 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00015625
         (516 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003546450.1| PREDICTED: uncharacterized protein LOC100778...    62   5e-08
ref|NP_001236809.1| uncharacterized protein LOC100527492 [Glycin...    61   8e-08
ref|XP_003595123.1| hypothetical protein MTR_2g038500 [Medicago ...    60   2e-07
ref|XP_002325247.1| predicted protein [Populus trichocarpa] gi|2...    55   8e-06

>ref|XP_003546450.1| PREDICTED: uncharacterized protein LOC100778382 [Glycine max]
          Length = 119

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 45/109 (41%), Positives = 55/109 (50%), Gaps = 5/109 (4%)
 Frame = +1

Query: 97  MGLEIPEEFWPITPLRTISLTRTKASPITPTKDNDNGSKVSD---LNSSINEEEDCHTPK 267
           MGLEI EEF PITP+RT+  T      +  T  +D G+  +    LN  +  EE+CHTP 
Sbjct: 1   MGLEILEEFRPITPIRTVVPT------VRTTLKHDLGTTTTTKEVLNEDVLIEEECHTPT 54

Query: 268 SKDQLLKT-PLVC-XXXXXXXXXXXXXSTSTVATQLFFHVPRDLNSVFV 408
           S  Q L T PLVC              +    + Q FF VP DL SVFV
Sbjct: 55  SPSQKLSTNPLVCPPAPKKPRVVPRRHNLDPPSQQGFFKVPHDLASVFV 103


>ref|NP_001236809.1| uncharacterized protein LOC100527492 [Glycine max]
           gi|255632472|gb|ACU16586.1| unknown [Glycine max]
          Length = 121

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 44/111 (39%), Positives = 55/111 (49%), Gaps = 7/111 (6%)
 Frame = +1

Query: 97  MGLEIPEEFWPITPLRTISLTRTKASPITPTKDNDNGSKVSDLNSSINE----EEDCHTP 264
           MGLEI EEF PITP+RT+  T      +  T  +D G+  +     +NE    EE+CHTP
Sbjct: 1   MGLEILEEFRPITPIRTVVPT------VRTTLKHDLGTTTTTTKEVLNEDVVIEEECHTP 54

Query: 265 KSKDQLLKT-PLVC--XXXXXXXXXXXXXSTSTVATQLFFHVPRDLNSVFV 408
            S  Q L T PLVC               +    + + FF VP DL SVFV
Sbjct: 55  TSPSQKLPTNPLVCPPAPKKPRVVPRRLKNLDPPSQEGFFQVPHDLASVFV 105


>ref|XP_003595123.1| hypothetical protein MTR_2g038500 [Medicago truncatula]
           gi|355484171|gb|AES65374.1| hypothetical protein
           MTR_2g038500 [Medicago truncatula]
          Length = 112

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 42/106 (39%), Positives = 55/106 (51%), Gaps = 2/106 (1%)
 Frame = +1

Query: 97  MGLEIPEEFWPITPLRTISLTRTKASPITPTKDNDNGSKVSDLNSSINE-EEDCHTP-KS 270
           MGLE+ EEF PITP+RTI+       P+T T  +   S+V      + E E++CHTP  S
Sbjct: 1   MGLEMLEEFLPITPIRTIA-------PMTKTLKHV--SEVETTKKVLRENEQECHTPTSS 51

Query: 271 KDQLLKTPLVCXXXXXXXXXXXXXSTSTVATQLFFHVPRDLNSVFV 408
           + Q     LVC               S + +Q+FF VP DL SVFV
Sbjct: 52  RGQSSHNFLVCPPAPKKSRVTQRNKNSALPSQVFFQVPHDLASVFV 97


>ref|XP_002325247.1| predicted protein [Populus trichocarpa] gi|222866681|gb|EEF03812.1|
           predicted protein [Populus trichocarpa]
          Length = 121

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 42/121 (34%), Positives = 61/121 (50%), Gaps = 7/121 (5%)
 Frame = +1

Query: 97  MGLEIPEEFWPITPLRTISLTRTKASPITPTKDNDNGSKVSDLNSSINEEEDCH-----T 261
           MGLEI EEF PITP+RT+S T + ++  +        +K +D    +N +ED       T
Sbjct: 1   MGLEISEEFRPITPIRTVSRTCSNSTTNSSIGTKFCEAKEADAKKILNFDEDQESSNPST 60

Query: 262 PKSKDQLLKTPLVCXXXXXXXXXXXXXSTSTVATQLFFHVP-RDLNSVFVPLVN-SSKKI 435
           PKS   +LK+PLVC              +     Q FF +P  D +SV + L   +SKK+
Sbjct: 61  PKSPTHILKSPLVCPPAPRKPRPPKRKLSP--PPQGFFEIPVNDSDSVLMVLTTCNSKKM 118

Query: 436 K 438
           +
Sbjct: 119 R 119


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