BLASTX nr result

ID: Coptis21_contig00015617 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00015617
         (587 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270913.2| PREDICTED: uncharacterized protein LOC100253...   249   2e-64
emb|CBI16670.3| unnamed protein product [Vitis vinifera]              249   2e-64
ref|XP_002511580.1| RING finger protein, putative [Ricinus commu...   241   5e-62
ref|XP_002302496.1| predicted protein [Populus trichocarpa] gi|2...   236   3e-60
ref|NP_191589.3| ubiquitin-protein ligase RNF25 [Arabidopsis tha...   229   3e-58

>ref|XP_002270913.2| PREDICTED: uncharacterized protein LOC100253028 [Vitis vinifera]
          Length = 429

 Score =  249 bits (637), Expect = 2e-64
 Identities = 111/154 (72%), Positives = 131/154 (85%)
 Frame = +2

Query: 77  YGEDCLVIQRFPPHLHLHIKPRTADDSSQQFVEAILELRAGTQYPDEPPQVGIRESKGLD 256
           YGEDCLV+  FPPHLH+HIKPRTAD SSQQFVEA+L ++AG++YP+EPP + I +SKGLD
Sbjct: 17  YGEDCLVLDHFPPHLHVHIKPRTADVSSQQFVEAVLGIQAGSKYPNEPPIIDIIDSKGLD 76

Query: 257 EVRQAHLIASIKEKVDELSSCLMLIALCEEAVQVLSHMNHPDGDCPLCLYPLVKEDGHDN 436
           E RQ HLI SI+ K  ELSSCLML+ALCEEAV+ LS MNHPDG+CPLCLYPL  E   +N
Sbjct: 77  EERQMHLIRSIRNKACELSSCLMLVALCEEAVERLSTMNHPDGNCPLCLYPLFPEHKQNN 136

Query: 437 LLPFMKLMSCYHCFHSKCIIKWWNWIQQQSETDP 538
           +LPFMKLMSC+HCFHS+CII+WWNW+Q Q E DP
Sbjct: 137 ILPFMKLMSCFHCFHSECIIRWWNWLQTQEEMDP 170


>emb|CBI16670.3| unnamed protein product [Vitis vinifera]
          Length = 355

 Score =  249 bits (637), Expect = 2e-64
 Identities = 111/154 (72%), Positives = 131/154 (85%)
 Frame = +2

Query: 77  YGEDCLVIQRFPPHLHLHIKPRTADDSSQQFVEAILELRAGTQYPDEPPQVGIRESKGLD 256
           YGEDCLV+  FPPHLH+HIKPRTAD SSQQFVEA+L ++AG++YP+EPP + I +SKGLD
Sbjct: 17  YGEDCLVLDHFPPHLHVHIKPRTADVSSQQFVEAVLGIQAGSKYPNEPPIIDIIDSKGLD 76

Query: 257 EVRQAHLIASIKEKVDELSSCLMLIALCEEAVQVLSHMNHPDGDCPLCLYPLVKEDGHDN 436
           E RQ HLI SI+ K  ELSSCLML+ALCEEAV+ LS MNHPDG+CPLCLYPL  E   +N
Sbjct: 77  EERQMHLIRSIRNKACELSSCLMLVALCEEAVERLSTMNHPDGNCPLCLYPLFPEHKQNN 136

Query: 437 LLPFMKLMSCYHCFHSKCIIKWWNWIQQQSETDP 538
           +LPFMKLMSC+HCFHS+CII+WWNW+Q Q E DP
Sbjct: 137 ILPFMKLMSCFHCFHSECIIRWWNWLQTQEEMDP 170


>ref|XP_002511580.1| RING finger protein, putative [Ricinus communis]
           gi|223548760|gb|EEF50249.1| RING finger protein,
           putative [Ricinus communis]
          Length = 355

 Score =  241 bits (616), Expect = 5e-62
 Identities = 106/153 (69%), Positives = 132/153 (86%)
 Frame = +2

Query: 77  YGEDCLVIQRFPPHLHLHIKPRTADDSSQQFVEAILELRAGTQYPDEPPQVGIRESKGLD 256
           YG+DC+VI  FPPHLH+HIKPRTAD SSQQFVEAI+ +RAG +YP+EPP + + ESKGLD
Sbjct: 21  YGDDCVVIDSFPPHLHVHIKPRTADVSSQQFVEAIIGIRAGPKYPNEPPCINLIESKGLD 80

Query: 257 EVRQAHLIASIKEKVDELSSCLMLIALCEEAVQVLSHMNHPDGDCPLCLYPLVKEDGHDN 436
           + RQ  LI+SI++K  ELSSCLML+ALCEEAV+ LS MNHPDG+CPLCLYPLV ED  D 
Sbjct: 81  DQRQKQLISSIQDKACELSSCLMLVALCEEAVEKLSIMNHPDGNCPLCLYPLVPEDEPDE 140

Query: 437 LLPFMKLMSCYHCFHSKCIIKWWNWIQQQSETD 535
            LPFMKLMSC+HCFHS+CI++WWNW+Q++ +++
Sbjct: 141 TLPFMKLMSCFHCFHSECIMRWWNWLQKEKDSN 173


>ref|XP_002302496.1| predicted protein [Populus trichocarpa] gi|222844222|gb|EEE81769.1|
           predicted protein [Populus trichocarpa]
          Length = 354

 Score =  236 bits (601), Expect = 3e-60
 Identities = 102/153 (66%), Positives = 126/153 (82%)
 Frame = +2

Query: 77  YGEDCLVIQRFPPHLHLHIKPRTADDSSQQFVEAILELRAGTQYPDEPPQVGIRESKGLD 256
           YG+DC++++ FPPHLHLHIKPRTAD SSQQFVEA++ +RAG QYP +PP + + ESKGLD
Sbjct: 17  YGDDCVILESFPPHLHLHIKPRTADISSQQFVEAVIGIRAGPQYPSKPPWIDLIESKGLD 76

Query: 257 EVRQAHLIASIKEKVDELSSCLMLIALCEEAVQVLSHMNHPDGDCPLCLYPLVKEDGHDN 436
             RQ  LI  I+EK  ELSSCLML+ALCEEAV+ L+ MNHPDGDCPLC+ P V ED  D 
Sbjct: 77  GERQKQLITGIQEKACELSSCLMLVALCEEAVEKLTVMNHPDGDCPLCMCPFVPEDEQDE 136

Query: 437 LLPFMKLMSCYHCFHSKCIIKWWNWIQQQSETD 535
            LPFMKLMSC+HCFH +CI++WWNWIQ++ E++
Sbjct: 137 ALPFMKLMSCFHCFHCECIVRWWNWIQKEKESN 169


>ref|NP_191589.3| ubiquitin-protein ligase RNF25 [Arabidopsis thaliana]
           gi|66865936|gb|AAY57602.1| RING finger family protein
           [Arabidopsis thaliana] gi|332646519|gb|AEE80040.1|
           ubiquitin-protein ligase RNF25 [Arabidopsis thaliana]
          Length = 366

 Score =  229 bits (583), Expect = 3e-58
 Identities = 98/153 (64%), Positives = 123/153 (80%)
 Frame = +2

Query: 77  YGEDCLVIQRFPPHLHLHIKPRTADDSSQQFVEAILELRAGTQYPDEPPQVGIRESKGLD 256
           Y EDC+++  +PPHLHLHIKPRTA+ SSQQFVEA++  +AG++YPDEPP++ + ESKGLD
Sbjct: 17  YSEDCVILDSYPPHLHLHIKPRTAEISSQQFVEAVVRFQAGSKYPDEPPRISLIESKGLD 76

Query: 257 EVRQAHLIASIKEKVDELSSCLMLIALCEEAVQVLSHMNHPDGDCPLCLYPLVKEDGHDN 436
           E RQ  LI  ++EK  +LSS LML+ LCEEAV+ L+ MNHP+GDCPLCLYPL  EDG   
Sbjct: 77  EQRQKLLIGIVQEKASQLSSSLMLVELCEEAVERLTIMNHPEGDCPLCLYPLFPEDGGSK 136

Query: 437 LLPFMKLMSCYHCFHSKCIIKWWNWIQQQSETD 535
            +PFMKLMSC+HCFH +CII+WWNW+  Q E D
Sbjct: 137 QMPFMKLMSCFHCFHCECIIRWWNWLHAQEEAD 169


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