BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00015588
         (509 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EAY74746.1| hypothetical protein OsI_02638 [Oryza sativa Indi...   153   2e-35
gb|EAZ12519.1| hypothetical protein OsJ_02416 [Oryza sativa Japo...   153   2e-35
tpg|DAA58746.1| TPA: hypothetical protein ZEAMMB73_747934 [Zea m...   144   6e-33
ref|XP_002458072.1| hypothetical protein SORBIDRAFT_03g026480 [S...   141   5e-32
ref|XP_002892433.1| pentatricopeptide repeat-containing protein ...   104   9e-21

>gb|EAY74746.1| hypothetical protein OsI_02638 [Oryza sativa Indica Group]
          Length = 536

 Score =  153 bits (386), Expect = 2e-35
 Identities = 78/164 (47%), Positives = 109/164 (66%), Gaps = 3/164 (1%)
 Frame = +3

Query: 27  FKTSYEDFFELKVAPNSYTFSIVLKACMDMRSLVFAMQVHGLVVKLLNGDLKDTVFVQNS 206
           F   Y + +E  V PN++T S +LKAC+ ++SL  A Q+H L +KLL  +  D  FV N 
Sbjct: 139 FAAFYGELYERGVLPNAHTLSSLLKACVALQSLAMATQLHALALKLLEEENTDNTFVWNG 198

Query: 207 LIDVHSKLGNLADAEKIFNGLMFKDLSSWNIIMDAYARRRFIDKALRVFKSMSEKDTLSY 386
           LIDVH+K+G L DAEK+F+G+ FKD SSW I+MD Y+R + IDKAL +F+SM  KD  ++
Sbjct: 199 LIDVHAKVGALCDAEKVFDGMRFKDASSWTIMMDGYSRHKLIDKALYLFRSMKNKDAFTW 258

Query: 387 NIMISGLAESGYGIEALELFLQLLH---SQSPRIKPNMSTYTTV 509
           N++IS L ++  G +AL LF+ LL      +   KP+ S YTTV
Sbjct: 259 NVIISCLWQNRRGEDALRLFIDLLRLGDRDNGGAKPDASIYTTV 302


>gb|EAZ12519.1| hypothetical protein OsJ_02416 [Oryza sativa Japonica Group]
          Length = 539

 Score =  153 bits (386), Expect = 2e-35
 Identities = 78/164 (47%), Positives = 109/164 (66%), Gaps = 3/164 (1%)
 Frame = +3

Query: 27  FKTSYEDFFELKVAPNSYTFSIVLKACMDMRSLVFAMQVHGLVVKLLNGDLKDTVFVQNS 206
           F   Y + +E  V PN++T S +LKAC+ ++SL  A Q+H L +KLL  +  D  FV N 
Sbjct: 139 FAALYGELYERGVLPNAHTLSSLLKACVALQSLAMATQLHALALKLLEEENTDNTFVWNG 198

Query: 207 LIDVHSKLGNLADAEKIFNGLMFKDLSSWNIIMDAYARRRFIDKALRVFKSMSEKDTLSY 386
           LIDVH+K+G L DAEK+F+G+ FKD SSW I+MD Y+R + IDKAL +F+SM  KD  ++
Sbjct: 199 LIDVHAKVGALCDAEKVFDGIRFKDASSWTIMMDGYSRHKLIDKALYLFRSMKNKDAFTW 258

Query: 387 NIMISGLAESGYGIEALELFLQLLH---SQSPRIKPNMSTYTTV 509
           N++IS L ++  G +AL LF+ LL      +   KP+ S YTTV
Sbjct: 259 NVIISCLWQNRRGEDALRLFIDLLRLGDRDNGGAKPDASIYTTV 302


>tpg|DAA58746.1| TPA: hypothetical protein ZEAMMB73_747934 [Zea mays]
          Length = 536

 Score =  144 bits (364), Expect = 6e-33
 Identities = 74/164 (45%), Positives = 112/164 (68%), Gaps = 3/164 (1%)
 Frame = +3

Query: 27  FKTSYEDFFELKVAPNSYTFSIVLKACMDMRSLVFAMQVHGLVVKLLNGDLKDTVFVQNS 206
           F   Y +FF   V PN++TFS +LKAC+ ++S    +Q+HG++ KLL+   + + FV N+
Sbjct: 139 FVALYAEFFARGVLPNAHTFSSLLKACVGVQSPAMLLQLHGVIFKLLDEGSR-SCFVWNA 197

Query: 207 LIDVHSKLGNLADAEKIFNGLMFKDLSSWNIIMDAYARRRFIDKALRVFKSMSEKDTLSY 386
           L+D H+KLG L+DAEK+F+G+  +D+ SWNI+MD Y+R + +D+AL +F+SM EKDT ++
Sbjct: 198 LVDAHAKLGALSDAEKVFHGMRQRDICSWNIMMDGYSRHKLVDRALDLFRSMREKDTSTW 257

Query: 387 NIMISGLAESGYGIEALELFLQLLHSQ---SPRIKPNMSTYTTV 509
           NI+I  L E+  G +AL LF+ L+ S        + N S YTTV
Sbjct: 258 NIIICCLGENRLGEDALRLFIDLVRSYGHCGGDAEVNASIYTTV 301



 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 40/149 (26%), Positives = 69/149 (46%), Gaps = 3/149 (2%)
 Frame = +3

Query: 72  NSYTFSIVLKACMDMRSLVFAMQVHGLVVKLLNGDLKDTVFVQNSLIDVHSKLGNLADAE 251
           N+  ++ VL  C  +  L F  QVH   VK  +G  +  VFV NSLI ++S  G   D E
Sbjct: 294 NASIYTTVLHICSVLALLAFGRQVHARAVK--DGFGRSNVFVSNSLISMYSSCGATLDLE 351

Query: 252 KIFNGLMFKDLSSWNIIMDAYARRRFIDKALRVFKSMSEKDTLSYNIMISGL---AESGY 422
           ++   +  +D+ SWN  +    +     +AL   +   E    + N  I+ L   + +G 
Sbjct: 352 QVLEEMAVRDVVSWNSAIQGLGQNGLGRQALAAGERALELGMYNGNTFIAILTSCSHAGM 411

Query: 423 GIEALELFLQLLHSQSPRIKPNMSTYTTV 509
            +E L  F  +  ++   ++P +  Y +V
Sbjct: 412 VVEGLSYFDAM--AKKHGVEPTLDHYISV 438


>ref|XP_002458072.1| hypothetical protein SORBIDRAFT_03g026480 [Sorghum bicolor]
           gi|241930047|gb|EES03192.1| hypothetical protein
           SORBIDRAFT_03g026480 [Sorghum bicolor]
          Length = 579

 Score =  141 bits (356), Expect = 5e-32
 Identities = 73/165 (44%), Positives = 111/165 (67%), Gaps = 4/165 (2%)
 Frame = +3

Query: 27  FKTSYEDFFELKVAPNSYTFSIVLKACMDMRSLVFAMQVHGLVVKLLNGDLKDTVFVQNS 206
           F   Y +FF   + PN++TFS +LKAC+ ++SL   +Q+HGL+ KL++ +     FV N+
Sbjct: 182 FVALYAEFFARGMLPNAHTFSSLLKACVGVQSLAMLLQLHGLIFKLVD-EGSGHCFVWNA 240

Query: 207 LIDVHSKLGNLADAEKIFNGLMFKDLSSWNIIMDAYARRRFIDKALRVFKSMSEKDTLSY 386
           L+D H+KLG ++DAEK+F+ +  +D+ SWNI+MD Y+R + ID+AL +F+SM +KD  ++
Sbjct: 241 LVDAHAKLGAMSDAEKVFDEMRHRDICSWNIMMDGYSRHKLIDRALDLFRSMRKKDASTW 300

Query: 387 NIMISGLAESGYGIEALELFLQLL----HSQSPRIKPNMSTYTTV 509
           NI+IS L E+  G +AL LF+ L+    HS       N S YTTV
Sbjct: 301 NIIISCLGENSLGEDALRLFIDLVRSECHSGGNAKVLNPSIYTTV 345



 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 40/149 (26%), Positives = 69/149 (46%), Gaps = 3/149 (2%)
 Frame = +3

Query: 72  NSYTFSIVLKACMDMRSLVFAMQVHGLVVKLLNGDLKDTVFVQNSLIDVHSKLGNLADAE 251
           N   ++ VL  C  +  L F  QVH   +K  +G  +   FV NSLI ++S  G   D E
Sbjct: 338 NPSIYTTVLHTCSVLALLAFGRQVHARTIK--DGFGRSNTFVSNSLISMYSSCGATLDLE 395

Query: 252 KIFNGLMFKDLSSWNIIMDAYARRRFIDKALRVFKSMSEKDTLSYNIMISGL---AESGY 422
           ++F  +  +D+ SWN ++    +     +AL   +   E    + N  I+ L   + SG 
Sbjct: 396 QVFEEMTVRDVVSWNSVIQGLGQNGLGRQALAAGERALELGMYNGNTFIAILTSCSHSGL 455

Query: 423 GIEALELFLQLLHSQSPRIKPNMSTYTTV 509
            +E L  F  +  ++   ++P +  Y +V
Sbjct: 456 VVEGLGYFDAM--AKKHGVEPTLGHYISV 482


>ref|XP_002892433.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297338275|gb|EFH68692.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 741

 Score =  104 bits (259), Expect = 9e-21
 Identities = 62/157 (39%), Positives = 93/157 (59%)
 Frame = +3

Query: 39  YEDFFELKVAPNSYTFSIVLKACMDMRSLVFAMQVHGLVVKLLNGDLKDTVFVQNSLIDV 218
           Y     L + PNSYTF  +LK+C   ++     Q+HG V+KL   DL   +FV  SLI V
Sbjct: 122 YVCMISLGLLPNSYTFPFLLKSCAKSKAFKEGQQIHGHVLKL-GYDLD--LFVHTSLISV 178

Query: 219 HSKLGNLADAEKIFNGLMFKDLSSWNIIMDAYARRRFIDKALRVFKSMSEKDTLSYNIMI 398
           + + G L DA K+F+    +D+ S+  ++  YA R +I+ A ++F  +  KD +S+N MI
Sbjct: 179 YVQNGRLEDARKVFDRSPHRDVVSYTALIKGYASRGYIESAQKLFDEIPVKDVVSWNAMI 238

Query: 399 SGLAESGYGIEALELFLQLLHSQSPRIKPNMSTYTTV 509
           SG AE+G   EALELF +++ +    I+P+ ST  TV
Sbjct: 239 SGYAETGNYKEALELFKEMMKT---NIRPDESTMVTV 272



 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 31/108 (28%), Positives = 55/108 (50%)
 Frame = +3

Query: 39  YEDFFELKVAPNSYTFSIVLKACMDMRSLVFAMQVHGLVVKLLNGDLKDTVFVQNSLIDV 218
           +++  +  + P+  T   V+ AC    S+    QVH  +    +      + + NSL+D+
Sbjct: 254 FKEMMKTNIRPDESTMVTVVSACAQSGSIELGRQVHSWID---DHGFGSNLKIVNSLMDL 310

Query: 219 HSKLGNLADAEKIFNGLMFKDLSSWNIIMDAYARRRFIDKALRVFKSM 362
           +SK G L  A  +F GL++KD+ SWN ++  Y       +AL +F+ M
Sbjct: 311 YSKCGELETACGLFEGLLYKDVISWNTLIGGYTHMNLYKEALLLFQEM 358



 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 39/148 (26%), Positives = 72/148 (48%), Gaps = 4/148 (2%)
 Frame = +3

Query: 69  PNSYTFSIVLKACMDMRSLVFAMQVHGLVVKLLNGDLKDTVFVQNSLIDVHSKLGNLADA 248
           PN  T   +L AC  + ++     +H  + K L     +   ++ SLID+++K G++  A
Sbjct: 365 PNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKS-ATNASSLRTSLIDMYAKCGDIEAA 423

Query: 249 EKIFNGLMFKDLSSWNIIMDAYARRRFIDKALRVFKSMS----EKDTLSYNIMISGLAES 416
            ++FN ++ K LSSWN ++  +A     D A  +F  M     E D +++  ++S  + S
Sbjct: 424 HQVFNSILHKSLSSWNAMIFGFAMHGRADAAFDIFSRMRKIGIEPDDITFVGLLSACSRS 483

Query: 417 GYGIEALELFLQLLHSQSPRIKPNMSTY 500
           G       +F  +  +Q  +I P +  Y
Sbjct: 484 GMLDLGRHIFRTM--TQDYKITPKLEHY 509