BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00015587
         (501 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002327176.1| f-box family protein [Populus trichocarpa] g...   136   2e-31
ref|XP_002284998.1| PREDICTED: F-box protein At1g47056 [Vitis vi...   128   7e-31
ref|XP_003544473.1| PREDICTED: F-box protein At1g47056-like [Gly...   127   1e-29
ref|XP_002510165.1| skip-2, putative [Ricinus communis] gi|22355...   132   2e-29
ref|XP_004141272.1| PREDICTED: F-box protein At1g47056-like [Cuc...   126   6e-29

>ref|XP_002327176.1| f-box family protein [Populus trichocarpa]
           gi|222835491|gb|EEE73926.1| f-box family protein
           [Populus trichocarpa]
          Length = 534

 Score =  136 bits (342), Expect(2) = 2e-31
 Identities = 69/112 (61%), Positives = 79/112 (70%), Gaps = 1/112 (0%)
 Frame = +1

Query: 1   TNLSLGLLG-NCRNLERLALCSSETIGDSEISCIAAKCVALKKLCIKGCPITNHAMEALV 177
           T +S+ LL  NC+NLERLALC S+T+GD+EISCIAAKCVALKKLCIK CP+++H MEAL 
Sbjct: 363 TKISVELLASNCQNLERLALCGSDTVGDAEISCIAAKCVALKKLCIKSCPVSDHGMEALA 422

Query: 178 AGCPNLXXXXXXXXXXXXXXXXXWLRTFRQSLAVNLDVGASENLDASTSDGG 333
            GCPNL                 WLRT R SLAVNLD G  E+ DAS SDGG
Sbjct: 423 NGCPNLVKVKVKKCRAVTCECADWLRTKRGSLAVNLDCGEPEHQDASASDGG 474



 Score = 24.6 bits (52), Expect(2) = 2e-31
 Identities = 11/20 (55%), Positives = 15/20 (75%)
 Frame = +2

Query: 440 IASGSNGRSSLSKARLGIFA 499
           IAS S GRS+  K+RLG+ +
Sbjct: 494 IASSSTGRSTSFKSRLGLLS 513


>ref|XP_002284998.1| PREDICTED: F-box protein At1g47056 [Vitis vinifera]
          Length = 541

 Score =  128 bits (322), Expect(2) = 7e-31
 Identities = 65/112 (58%), Positives = 78/112 (69%), Gaps = 1/112 (0%)
 Frame = +1

Query: 1   TNLSLGLLG-NCRNLERLALCSSETIGDSEISCIAAKCVALKKLCIKGCPITNHAMEALV 177
           T LSL +L  NC+NLERLALC+S+T+GD+EISCIAAKC+ALKKLCIK CP+++  M AL 
Sbjct: 365 TKLSLEMLAANCQNLERLALCASDTVGDAEISCIAAKCLALKKLCIKSCPVSDQGMRALA 424

Query: 178 AGCPNLXXXXXXXXXXXXXXXXXWLRTFRQSLAVNLDVGASENLDASTSDGG 333
            GCPNL                  LR  R+SLAVNLD G +E+ DAS SDGG
Sbjct: 425 CGCPNLVKVKVKKCRAVTYEGADGLRASRESLAVNLDTGETEHQDASASDGG 476



 Score = 30.4 bits (67), Expect(2) = 7e-31
 Identities = 14/22 (63%), Positives = 19/22 (86%)
 Frame = +2

Query: 428 GSADIASGSNGRSSLSKARLGI 493
           G+A+IAS S+GRS+  KARLG+
Sbjct: 492 GAANIASSSSGRSNSLKARLGL 513


>ref|XP_003544473.1| PREDICTED: F-box protein At1g47056-like [Glycine max]
          Length = 549

 Score =  127 bits (319), Expect(2) = 1e-29
 Identities = 65/112 (58%), Positives = 76/112 (67%), Gaps = 1/112 (0%)
 Frame = +1

Query: 1   TNLSLGLLG-NCRNLERLALCSSETIGDSEISCIAAKCVALKKLCIKGCPITNHAMEALV 177
           T  SL +L  NCRNLERLALC S+++GD+EISCIAAKCVALKKLCIK CP+++  MEAL 
Sbjct: 376 TKASLEMLASNCRNLERLALCGSDSVGDTEISCIAAKCVALKKLCIKSCPVSDQGMEALA 435

Query: 178 AGCPNLXXXXXXXXXXXXXXXXXWLRTFRQSLAVNLDVGASENLDASTSDGG 333
            GCPNL                 WLR  R S+AVNLD G +E  +AS SDGG
Sbjct: 436 NGCPNLVKVKVKKCKGVTPEGGDWLRRTRGSVAVNLDTGEAELQEASASDGG 487



 Score = 27.3 bits (59), Expect(2) = 1e-29
 Identities = 16/34 (47%), Positives = 19/34 (55%)
 Frame = +2

Query: 398 ETPQGVNQIAGSADIASGSNGRSSLSKARLGIFA 499
           E PQ   QI  +A  AS S  RSS  K RLG+ +
Sbjct: 494 EFPQMPAQIVAAAASASSSTTRSSSFKLRLGLLS 527


>ref|XP_002510165.1| skip-2, putative [Ricinus communis] gi|223550866|gb|EEF52352.1|
           skip-2, putative [Ricinus communis]
          Length = 536

 Score =  132 bits (332), Expect(2) = 2e-29
 Identities = 63/105 (60%), Positives = 74/105 (70%)
 Frame = +1

Query: 19  LLGNCRNLERLALCSSETIGDSEISCIAAKCVALKKLCIKGCPITNHAMEALVAGCPNLX 198
           L  NC+NLERLALC S+T+GD+EISCIAAKC++LKKLCIK CP+++H MEAL +GCPNL 
Sbjct: 371 LASNCQNLERLALCGSDTVGDAEISCIAAKCISLKKLCIKSCPVSDHGMEALASGCPNLV 430

Query: 199 XXXXXXXXXXXXXXXXWLRTFRQSLAVNLDVGASENLDASTSDGG 333
                           WLR  R SLAVNLD G  E+ DAS SDGG
Sbjct: 431 KVKVKKCRGVTCEGADWLRASRGSLAVNLDSGEHEHHDASASDGG 475



 Score = 21.6 bits (44), Expect(2) = 2e-29
 Identities = 12/38 (31%), Positives = 19/38 (50%)
 Frame = +2

Query: 386 EIGAETPQGVNQIAGSADIASGSNGRSSLSKARLGIFA 499
           E   E P G       +  +S + GRS+  K+RLG+ +
Sbjct: 478 ENAVEIPPGQIAAVVPSVASSSTAGRSTSFKSRLGLLS 515


>ref|XP_004141272.1| PREDICTED: F-box protein At1g47056-like [Cucumis sativus]
           gi|449515093|ref|XP_004164584.1| PREDICTED: F-box
           protein At1g47056-like [Cucumis sativus]
          Length = 535

 Score =  126 bits (316), Expect(2) = 6e-29
 Identities = 66/112 (58%), Positives = 76/112 (67%), Gaps = 1/112 (0%)
 Frame = +1

Query: 1   TNLSLGLLG-NCRNLERLALCSSETIGDSEISCIAAKCVALKKLCIKGCPITNHAMEALV 177
           T +SL +L  NCRNLERLALC S+T+GDSEISCIAAKC+ALKKLCIK CP+++  MEAL 
Sbjct: 362 TKVSLEILASNCRNLERLALCGSDTVGDSEISCIAAKCIALKKLCIKSCPVSDQGMEALA 421

Query: 178 AGCPNLXXXXXXXXXXXXXXXXXWLRTFRQSLAVNLDVGASENLDASTSDGG 333
            GCPNL                  LR  R SLAVNLD G  E+ DAS S+GG
Sbjct: 422 EGCPNLVKVKVKKCRGVTPEGADSLRLSRGSLAVNLDSGEPEHPDASASEGG 473



 Score = 26.2 bits (56), Expect(2) = 6e-29
 Identities = 13/20 (65%), Positives = 15/20 (75%)
 Frame = +2

Query: 440 IASGSNGRSSLSKARLGIFA 499
           IAS S GRSS  K+RLG+ A
Sbjct: 493 IASSSAGRSSSLKSRLGLLA 512