BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00015580
         (1061 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004139512.1| PREDICTED: ras-related protein RABB1c-like [...   288   7e-91
ref|NP_193450.1| RAB GTPase homolog B1C [Arabidopsis thaliana] g...   288   7e-91
gb|ACU18994.1| unknown [Glycine max]                                  288   7e-91
ref|XP_002308739.1| predicted protein [Populus trichocarpa] gi|1...   288   7e-91
ref|XP_003546212.1| PREDICTED: ras-related protein RABB1c-like [...   288   7e-91

>ref|XP_004139512.1| PREDICTED: ras-related protein RABB1c-like [Cucumis sativus]
          Length = 211

 Score =  288 bits (738), Expect(2) = 7e-91
 Identities = 150/180 (83%), Positives = 150/180 (83%)
 Frame = -1

Query: 1058 MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW 879
            MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW
Sbjct: 1    MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW 60

Query: 878  DTAGQESFRXXXXXXXXXXXXXXXXXXXXXXXAGQESFRSITRSYYRGAAGALLVYDITR 699
            DTAGQE                              SFRSITRSYYRGAAGALLVYDITR
Sbjct: 61   DTAGQE------------------------------SFRSITRSYYRGAAGALLVYDITR 90

Query: 698  RETFNHLASWLEDARQHANANMTIMLIGNKCDLAHRRAVSTEEGEQFAKEHGLIFMEASA 519
            RETFNHLASWLEDARQHANANMTIMLIGNKCDLAHRRAVSTEEGEQFAKEHGLIFMEASA
Sbjct: 91   RETFNHLASWLEDARQHANANMTIMLIGNKCDLAHRRAVSTEEGEQFAKEHGLIFMEASA 150



 Score = 73.2 bits (178), Expect(2) = 7e-91
 Identities = 36/37 (97%), Positives = 36/37 (97%)
 Frame = -2

Query: 442 KTAQNVEEAFISTAATIYKKIQDGVFDVSNESYGIKV 332
           KTAQNVEEAFI TAATIYKKIQDGVFDVSNESYGIKV
Sbjct: 151 KTAQNVEEAFIKTAATIYKKIQDGVFDVSNESYGIKV 187


>ref|NP_193450.1| RAB GTPase homolog B1C [Arabidopsis thaliana]
            gi|297800394|ref|XP_002868081.1| hypothetical protein
            ARALYDRAFT_493160 [Arabidopsis lyrata subsp. lyrata]
            gi|75279776|sp|P92963.1|RAB1C_ARATH RecName:
            Full=Ras-related protein RABB1c; Short=AtRABB1c; AltName:
            Full=Ras-related protein Rab2A; Short=AtRab2A
            gi|1765896|emb|CAA70498.1| Rab2-like protein [Arabidopsis
            thaliana] gi|5281023|emb|CAB45962.1| GTP-binding RAB2A
            like protein [Arabidopsis thaliana]
            gi|7268468|emb|CAB80988.1| GTP-binding RAB2A like protein
            [Arabidopsis thaliana] gi|27311815|gb|AAO00873.1|
            GTP-binding RAB2A like protein [Arabidopsis thaliana]
            gi|30023652|gb|AAP13359.1| At4g17170 [Arabidopsis
            thaliana] gi|297313917|gb|EFH44340.1| hypothetical
            protein ARALYDRAFT_493160 [Arabidopsis lyrata subsp.
            lyrata] gi|332658457|gb|AEE83857.1| RAB GTPase homolog
            B1C [Arabidopsis thaliana]
          Length = 211

 Score =  288 bits (738), Expect(2) = 7e-91
 Identities = 150/180 (83%), Positives = 150/180 (83%)
 Frame = -1

Query: 1058 MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW 879
            MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW
Sbjct: 1    MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW 60

Query: 878  DTAGQESFRXXXXXXXXXXXXXXXXXXXXXXXAGQESFRSITRSYYRGAAGALLVYDITR 699
            DTAGQE                              SFRSITRSYYRGAAGALLVYDITR
Sbjct: 61   DTAGQE------------------------------SFRSITRSYYRGAAGALLVYDITR 90

Query: 698  RETFNHLASWLEDARQHANANMTIMLIGNKCDLAHRRAVSTEEGEQFAKEHGLIFMEASA 519
            RETFNHLASWLEDARQHANANMTIMLIGNKCDLAHRRAVSTEEGEQFAKEHGLIFMEASA
Sbjct: 91   RETFNHLASWLEDARQHANANMTIMLIGNKCDLAHRRAVSTEEGEQFAKEHGLIFMEASA 150



 Score = 73.2 bits (178), Expect(2) = 7e-91
 Identities = 36/37 (97%), Positives = 36/37 (97%)
 Frame = -2

Query: 442 KTAQNVEEAFISTAATIYKKIQDGVFDVSNESYGIKV 332
           KTAQNVEEAFI TAATIYKKIQDGVFDVSNESYGIKV
Sbjct: 151 KTAQNVEEAFIKTAATIYKKIQDGVFDVSNESYGIKV 187


>gb|ACU18994.1| unknown [Glycine max]
          Length = 211

 Score =  288 bits (738), Expect(2) = 7e-91
 Identities = 150/180 (83%), Positives = 150/180 (83%)
 Frame = -1

Query: 1058 MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW 879
            MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW
Sbjct: 1    MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW 60

Query: 878  DTAGQESFRXXXXXXXXXXXXXXXXXXXXXXXAGQESFRSITRSYYRGAAGALLVYDITR 699
            DTAGQE                              SFRSITRSYYRGAAGALLVYDITR
Sbjct: 61   DTAGQE------------------------------SFRSITRSYYRGAAGALLVYDITR 90

Query: 698  RETFNHLASWLEDARQHANANMTIMLIGNKCDLAHRRAVSTEEGEQFAKEHGLIFMEASA 519
            RETFNHLASWLEDARQHANANMTIMLIGNKCDLAHRRAVSTEEGEQFAKEHGLIFMEASA
Sbjct: 91   RETFNHLASWLEDARQHANANMTIMLIGNKCDLAHRRAVSTEEGEQFAKEHGLIFMEASA 150



 Score = 73.2 bits (178), Expect(2) = 7e-91
 Identities = 36/37 (97%), Positives = 36/37 (97%)
 Frame = -2

Query: 442 KTAQNVEEAFISTAATIYKKIQDGVFDVSNESYGIKV 332
           KTAQNVEEAFI TAATIYKKIQDGVFDVSNESYGIKV
Sbjct: 151 KTAQNVEEAFIKTAATIYKKIQDGVFDVSNESYGIKV 187


>ref|XP_002308739.1| predicted protein [Populus trichocarpa] gi|118487262|gb|ABK95459.1|
            unknown [Populus trichocarpa] gi|222854715|gb|EEE92262.1|
            predicted protein [Populus trichocarpa]
          Length = 211

 Score =  288 bits (738), Expect(2) = 7e-91
 Identities = 150/180 (83%), Positives = 150/180 (83%)
 Frame = -1

Query: 1058 MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW 879
            MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW
Sbjct: 1    MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW 60

Query: 878  DTAGQESFRXXXXXXXXXXXXXXXXXXXXXXXAGQESFRSITRSYYRGAAGALLVYDITR 699
            DTAGQE                              SFRSITRSYYRGAAGALLVYDITR
Sbjct: 61   DTAGQE------------------------------SFRSITRSYYRGAAGALLVYDITR 90

Query: 698  RETFNHLASWLEDARQHANANMTIMLIGNKCDLAHRRAVSTEEGEQFAKEHGLIFMEASA 519
            RETFNHLASWLEDARQHANANMTIMLIGNKCDLAHRRAVSTEEGEQFAKEHGLIFMEASA
Sbjct: 91   RETFNHLASWLEDARQHANANMTIMLIGNKCDLAHRRAVSTEEGEQFAKEHGLIFMEASA 150



 Score = 73.2 bits (178), Expect(2) = 7e-91
 Identities = 36/37 (97%), Positives = 36/37 (97%)
 Frame = -2

Query: 442 KTAQNVEEAFISTAATIYKKIQDGVFDVSNESYGIKV 332
           KTAQNVEEAFI TAATIYKKIQDGVFDVSNESYGIKV
Sbjct: 151 KTAQNVEEAFIKTAATIYKKIQDGVFDVSNESYGIKV 187


>ref|XP_003546212.1| PREDICTED: ras-related protein RABB1c-like [Glycine max]
            gi|1370176|emb|CAA98165.1| RAB2A [Lotus japonicus]
          Length = 211

 Score =  288 bits (738), Expect(2) = 7e-91
 Identities = 150/180 (83%), Positives = 150/180 (83%)
 Frame = -1

Query: 1058 MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW 879
            MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW
Sbjct: 1    MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW 60

Query: 878  DTAGQESFRXXXXXXXXXXXXXXXXXXXXXXXAGQESFRSITRSYYRGAAGALLVYDITR 699
            DTAGQE                              SFRSITRSYYRGAAGALLVYDITR
Sbjct: 61   DTAGQE------------------------------SFRSITRSYYRGAAGALLVYDITR 90

Query: 698  RETFNHLASWLEDARQHANANMTIMLIGNKCDLAHRRAVSTEEGEQFAKEHGLIFMEASA 519
            RETFNHLASWLEDARQHANANMTIMLIGNKCDLAHRRAVSTEEGEQFAKEHGLIFMEASA
Sbjct: 91   RETFNHLASWLEDARQHANANMTIMLIGNKCDLAHRRAVSTEEGEQFAKEHGLIFMEASA 150



 Score = 73.2 bits (178), Expect(2) = 7e-91
 Identities = 36/37 (97%), Positives = 36/37 (97%)
 Frame = -2

Query: 442 KTAQNVEEAFISTAATIYKKIQDGVFDVSNESYGIKV 332
           KTAQNVEEAFI TAATIYKKIQDGVFDVSNESYGIKV
Sbjct: 151 KTAQNVEEAFIKTAATIYKKIQDGVFDVSNESYGIKV 187