BLASTX nr result

ID: Coptis21_contig00015566 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00015566
         (464 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI17902.3| unnamed protein product [Vitis vinifera]               99   5e-19
ref|XP_002263344.1| PREDICTED: uncharacterized protein LOC100263...    99   5e-19
ref|XP_002530843.1| conserved hypothetical protein [Ricinus comm...    94   1e-17
ref|XP_003617221.1| LAS1-like protein [Medicago truncatula] gi|3...    86   3e-15
ref|XP_002298459.1| predicted protein [Populus trichocarpa] gi|2...    80   2e-13

>emb|CBI17902.3| unnamed protein product [Vitis vinifera]
          Length = 547

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 63/128 (49%), Positives = 80/128 (62%), Gaps = 13/128 (10%)
 Frame = -1

Query: 464 AKAWNPCPIGMLPCALGSTGVLPVLDRVVILPEVQKLP----GGKESWEWNTCS---GMT 306
           AK+WNPCPIGMLP ALGS+G LP LD      + QK+P      +E WE   CS      
Sbjct: 424 AKSWNPCPIGMLPRALGSSGRLPALDH----NDNQKMPPESSERRELWELKHCSRKREAC 479

Query: 305 YDVGLLEKTNAIEERNAVED-----GQADDPDL-LLNPVKGQLMIGGVYKKVWAEELLAI 144
           +D+ +L+ ++  + R  VED       +DD D+ L   VKGQL+I GV+KKV  EELLAI
Sbjct: 480 FDIEMLDNSSVKKMRETVEDQTIEGHDSDDKDVTLCEGVKGQLLINGVWKKVEREELLAI 539

Query: 143 ESAVRILV 120
           +SAVRILV
Sbjct: 540 KSAVRILV 547


>ref|XP_002263344.1| PREDICTED: uncharacterized protein LOC100263330 [Vitis vinifera]
          Length = 597

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 63/128 (49%), Positives = 80/128 (62%), Gaps = 13/128 (10%)
 Frame = -1

Query: 464 AKAWNPCPIGMLPCALGSTGVLPVLDRVVILPEVQKLP----GGKESWEWNTCS---GMT 306
           AK+WNPCPIGMLP ALGS+G LP LD      + QK+P      +E WE   CS      
Sbjct: 474 AKSWNPCPIGMLPRALGSSGRLPALDH----NDNQKMPPESSERRELWELKHCSRKREAC 529

Query: 305 YDVGLLEKTNAIEERNAVED-----GQADDPDL-LLNPVKGQLMIGGVYKKVWAEELLAI 144
           +D+ +L+ ++  + R  VED       +DD D+ L   VKGQL+I GV+KKV  EELLAI
Sbjct: 530 FDIEMLDNSSVKKMRETVEDQTIEGHDSDDKDVTLCEGVKGQLLINGVWKKVEREELLAI 589

Query: 143 ESAVRILV 120
           +SAVRILV
Sbjct: 590 KSAVRILV 597


>ref|XP_002530843.1| conserved hypothetical protein [Ricinus communis]
           gi|223529607|gb|EEF31556.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 589

 Score = 93.6 bits (231), Expect = 1e-17
 Identities = 57/137 (41%), Positives = 77/137 (56%), Gaps = 22/137 (16%)
 Frame = -1

Query: 464 AKAWNPCPIGMLPCALGSTGVLPVLDRVVILPEVQKLPGGKESWEWNTCSGM-------- 309
           AK+WNPCPIGMLP  LGS+G LP LD   +  E+  L G   +WE   C G+        
Sbjct: 455 AKSWNPCPIGMLPRDLGSSGCLPDLDHHYVDKELVNLSG--RTWELKQCGGVEEPSSDIH 512

Query: 308 -------------TYDVGLLEKTNAIEERNAVEDGQADDPDLLL-NPVKGQLMIGGVYKK 171
                        +YD+ LL++++  + R  VE  ++   D LL   +KG LMI GV+KK
Sbjct: 513 SNNSQVERSKREASYDICLLDRSSVKKMREMVESYESGGKDALLPTDIKGCLMINGVWKK 572

Query: 170 VWAEELLAIESAVRILV 120
           +  EELLAI+S +RILV
Sbjct: 573 IEEEELLAIKSGIRILV 589


>ref|XP_003617221.1| LAS1-like protein [Medicago truncatula] gi|355518556|gb|AET00180.1|
           LAS1-like protein [Medicago truncatula]
          Length = 603

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 52/124 (41%), Positives = 74/124 (59%), Gaps = 9/124 (7%)
 Frame = -1

Query: 464 AKAWNPCPIGMLPCALGSTGVLPVLDRVVILPEVQKLPGGKESWEWNTCSG---MTYDVG 294
           AK+WNPCPIGMLP  +GS+G LPVLD V+   E  +    KE+W+    S       D+ 
Sbjct: 481 AKSWNPCPIGMLPRVVGSSGCLPVLD-VIDNEEHNQASERKENWKLIKHSAKRDAPSDIQ 539

Query: 293 LLEKTNAIEERNAVEDGQADDPDLL------LNPVKGQLMIGGVYKKVWAEELLAIESAV 132
           LL+ +   + R   E G+ +D   +       +  KG LM+GG++KKV  EELL+I+S+V
Sbjct: 540 LLDNSTVKKMRETEEFGELNDESSMEEDESPTDEGKGYLMVGGIWKKVTEEELLSIQSSV 599

Query: 131 RILV 120
           RIL+
Sbjct: 600 RILI 603


>ref|XP_002298459.1| predicted protein [Populus trichocarpa] gi|222845717|gb|EEE83264.1|
           predicted protein [Populus trichocarpa]
          Length = 626

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 56/133 (42%), Positives = 74/133 (55%), Gaps = 18/133 (13%)
 Frame = -1

Query: 464 AKAWNPCPIGMLPCALGSTGVLPVLDRVVILPEVQKLPGGKESWEWNTCSG----MTY-- 303
           AK+WNPCPIGMLP  LGS+G LPVLD      +       K+SWE    S      +Y  
Sbjct: 494 AKSWNPCPIGMLPRDLGSSGHLPVLDCADDGKKPVHSSEWKQSWELKQGSSGDIRFSYGV 553

Query: 302 -----------DVGLLEKTNAIEERNAVEDGQADDPDLLLN-PVKGQLMIGGVYKKVWAE 159
                      D+ LL+K++A + R   +  ++D  ++LL+   KG LMI GV+KK+  E
Sbjct: 554 ERTSSKREAGCDIYLLDKSSAKKMRETADSFESDCENVLLSGDDKGCLMINGVWKKIGEE 613

Query: 158 ELLAIESAVRILV 120
           ELL I S VRILV
Sbjct: 614 ELLTIMSDVRILV 626


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