BLASTX nr result

ID: Coptis21_contig00015564 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00015564
         (1182 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN83288.1| hypothetical protein VITISV_033233 [Vitis vinifera]   344   2e-92
emb|CBI19652.3| unnamed protein product [Vitis vinifera]              342   8e-92
ref|XP_002281773.1| PREDICTED: probable GMP synthase [glutamine-...   342   8e-92
ref|XP_002510348.1| DNA-3-methyladenine glycosylase, putative [R...   337   5e-90
ref|XP_002302474.1| predicted protein [Populus trichocarpa] gi|2...   332   1e-88

>emb|CAN83288.1| hypothetical protein VITISV_033233 [Vitis vinifera]
          Length = 335

 Score =  344 bits (883), Expect = 2e-92
 Identities = 192/347 (55%), Positives = 221/347 (63%), Gaps = 12/347 (3%)
 Frame = -1

Query: 1173 KMSVDAEMSGETRSVLGPGGNRVVTVLQPEKKNKQASILNTQQTRKMVSSTKKLPEPVTX 994
            K+   A+   E R VLGPGGNR    +  E K K+  +   QQ RK  S   ++PE V  
Sbjct: 6    KLQSPAKPLSEGRVVLGPGGNRFR--VSEEAKCKKEGLKKPQQHRKQSS---EVPEAVIR 60

Query: 993  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRHHGLKSGKVAPSGAGDGEEQLLERPI 814
                                               +GLK  KV P G            +
Sbjct: 61   NNLSFESSCSSDSSSSGSSVKMVNSRGRVK----RNGLKPVKVVPHGV----------EV 106

Query: 813  VIKRCDWITPNSDRLYAIFHDEEWGIPVHDDNKLFELLVLSTALAELSWPDILNQRDIFR 634
              KRCDWITPNSD LY  FHDEEWG+PVHDD KLFELLVLS ALAELSWP ILN+RDIFR
Sbjct: 107  PAKRCDWITPNSDPLYTSFHDEEWGVPVHDDKKLFELLVLSQALAELSWPTILNKRDIFR 166

Query: 633  KLLDNFDPASVAKFNDKNIQLLKANGNPLLSEPKLRAVVENAKQMLKV----------QQ 484
            KL DNFDP+S+AKF DK +  LKA+G  LLSEPKLRAV+ENA QMLKV           Q
Sbjct: 167  KLFDNFDPSSIAKFTDKKLLSLKASGGTLLSEPKLRAVIENANQMLKVIKFITRCLWFSQ 226

Query: 483  EFGSFSNYCWIFVNHKPIKKGYRYARHVPVKSP-KAEAISKDLMRRGFRCVGPTVVYSFM 307
            EFGSFSNYCW F+NHKP+K G+RYAR VPVK+  +   ISKDLM+RGFRCVGPTV+YSFM
Sbjct: 227  EFGSFSNYCWSFINHKPMKNGFRYARQVPVKTQNQNNIISKDLMQRGFRCVGPTVIYSFM 286

Query: 306  QAAGIVNDHLTTCFRYQECISNVKKDAEAMTQETE-LAVALKKTCLS 169
            Q AG+VNDHL TCFR+QEC SN+KKD +A T+ETE L  AL+  CLS
Sbjct: 287  QVAGLVNDHLLTCFRFQECNSNIKKDLQAKTEETEVLTNALENNCLS 333


>emb|CBI19652.3| unnamed protein product [Vitis vinifera]
          Length = 313

 Score =  342 bits (878), Expect = 8e-92
 Identities = 187/336 (55%), Positives = 215/336 (63%), Gaps = 1/336 (0%)
 Frame = -1

Query: 1173 KMSVDAEMSGETRSVLGPGGNRVVTVLQPEKKNKQASILNTQQTRKMVSSTKKLPEPVTX 994
            K+   A+   E R VLGPGGNR    +  E K K+  +   QQ RK  S   ++PE V  
Sbjct: 6    KLQSPAKPLSEGRVVLGPGGNRFR--VSEEAKRKKEGLKKPQQHRKQSS---EVPEAVVR 60

Query: 993  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRHHGLKSGKVAPSGAGDGEEQLLERPI 814
                                               +GLK  KV P G            +
Sbjct: 61   NNLSFESSCSSDSSSSGSSVKMVNSRGRVK----RNGLKPVKVVPHGV----------EV 106

Query: 813  VIKRCDWITPNSDRLYAIFHDEEWGIPVHDDNKLFELLVLSTALAELSWPDILNQRDIFR 634
              KRCDWITPNSD LY  FHDEEWG+PVHDD KLFELLVLS ALAELSWP ILN+RDIFR
Sbjct: 107  PAKRCDWITPNSDPLYTSFHDEEWGVPVHDDKKLFELLVLSQALAELSWPTILNKRDIFR 166

Query: 633  KLLDNFDPASVAKFNDKNIQLLKANGNPLLSEPKLRAVVENAKQMLKVQQEFGSFSNYCW 454
            KL DNFDP+S+AKF DK +  LKA+G  LLSEPKLRAV+ENA QMLKVQQEFGSFSNYCW
Sbjct: 167  KLFDNFDPSSIAKFTDKKLLSLKASGGTLLSEPKLRAVIENANQMLKVQQEFGSFSNYCW 226

Query: 453  IFVNHKPIKKGYRYARHVPVKSPKAEAISKDLMRRGFRCVGPTVVYSFMQAAGIVNDHLT 274
             F+NHKP+K G+RYAR VPVK+           +RGFRCVGPTV+YSFMQ AG+VNDHL 
Sbjct: 227  SFINHKPMKNGFRYARQVPVKT-----------QRGFRCVGPTVIYSFMQVAGLVNDHLL 275

Query: 273  TCFRYQECISNVKKDAEAMTQETE-LAVALKKTCLS 169
            TCFR+QEC SN+KKD +A T+ETE L  AL+  CLS
Sbjct: 276  TCFRFQECNSNIKKDLQAKTEETEVLTNALENNCLS 311


>ref|XP_002281773.1| PREDICTED: probable GMP synthase [glutamine-hydrolyzing]-like [Vitis
            vinifera]
          Length = 315

 Score =  342 bits (878), Expect = 8e-92
 Identities = 187/336 (55%), Positives = 215/336 (63%), Gaps = 1/336 (0%)
 Frame = -1

Query: 1173 KMSVDAEMSGETRSVLGPGGNRVVTVLQPEKKNKQASILNTQQTRKMVSSTKKLPEPVTX 994
            K+   A+   E R VLGPGGNR    +  E K K+  +   QQ RK  S   ++PE V  
Sbjct: 8    KLQSPAKPLSEGRVVLGPGGNRFR--VSEEAKRKKEGLKKPQQHRKQSS---EVPEAVVR 62

Query: 993  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRHHGLKSGKVAPSGAGDGEEQLLERPI 814
                                               +GLK  KV P G            +
Sbjct: 63   NNLSFESSCSSDSSSSGSSVKMVNSRGRVK----RNGLKPVKVVPHGV----------EV 108

Query: 813  VIKRCDWITPNSDRLYAIFHDEEWGIPVHDDNKLFELLVLSTALAELSWPDILNQRDIFR 634
              KRCDWITPNSD LY  FHDEEWG+PVHDD KLFELLVLS ALAELSWP ILN+RDIFR
Sbjct: 109  PAKRCDWITPNSDPLYTSFHDEEWGVPVHDDKKLFELLVLSQALAELSWPTILNKRDIFR 168

Query: 633  KLLDNFDPASVAKFNDKNIQLLKANGNPLLSEPKLRAVVENAKQMLKVQQEFGSFSNYCW 454
            KL DNFDP+S+AKF DK +  LKA+G  LLSEPKLRAV+ENA QMLKVQQEFGSFSNYCW
Sbjct: 169  KLFDNFDPSSIAKFTDKKLLSLKASGGTLLSEPKLRAVIENANQMLKVQQEFGSFSNYCW 228

Query: 453  IFVNHKPIKKGYRYARHVPVKSPKAEAISKDLMRRGFRCVGPTVVYSFMQAAGIVNDHLT 274
             F+NHKP+K G+RYAR VPVK+           +RGFRCVGPTV+YSFMQ AG+VNDHL 
Sbjct: 229  SFINHKPMKNGFRYARQVPVKT-----------QRGFRCVGPTVIYSFMQVAGLVNDHLL 277

Query: 273  TCFRYQECISNVKKDAEAMTQETE-LAVALKKTCLS 169
            TCFR+QEC SN+KKD +A T+ETE L  AL+  CLS
Sbjct: 278  TCFRFQECNSNIKKDLQAKTEETEVLTNALENNCLS 313


>ref|XP_002510348.1| DNA-3-methyladenine glycosylase, putative [Ricinus communis]
            gi|223551049|gb|EEF52535.1| DNA-3-methyladenine
            glycosylase, putative [Ricinus communis]
          Length = 336

 Score =  337 bits (863), Expect = 5e-90
 Identities = 181/341 (53%), Positives = 221/341 (64%), Gaps = 6/341 (1%)
 Frame = -1

Query: 1173 KMSVDAEMSGETRSVLGPGGNRVVTVLQPEKKNKQASILNTQQTRKMVSSTKKLPEPVTX 994
            K+    +   E R++LGP GNRV  VL+  ++  +    + QQ +    +   +P+ V  
Sbjct: 6    KLRTSTKSVPERRAILGPTGNRV-RVLEECRRKDELLKKSQQQKKPKKPAVSDMPQVVVK 64

Query: 993  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRHHGLKSGKVAPSGAGDGEEQLLERPI 814
                                                   + K+ P GA    +Q L    
Sbjct: 65   HNLSVDSSCSSSSSSSSGSLRKVASPRRNVKR------SAVKIVPEGAEFASKQDLP--- 115

Query: 813  VIKRCDWITPNSDRLYAIFHDEEWGIPVHDDNKLFELLVLSTALAELSWPDILNQRDI-- 640
             +KRCDWIT NSD LY  FHDEEWG+PVHDD KLFELLV S ALAE+SWP IL+ R+I  
Sbjct: 116  -VKRCDWITSNSDSLYMSFHDEEWGVPVHDDTKLFELLVFSQALAEMSWPTILHMRNIXX 174

Query: 639  ---FRKLLDNFDPASVAKFNDKNIQLLKANGNPLLSEPKLRAVVENAKQMLKVQQEFGSF 469
               FRKL DNFDP+SVA+F +K +  LK NGN LLSEPKLRA+VENAK +LKVQQEFGSF
Sbjct: 175  RNIFRKLFDNFDPSSVAQFTEKKLLSLKVNGNLLLSEPKLRAIVENAKLLLKVQQEFGSF 234

Query: 468  SNYCWIFVNHKPIKKGYRYARHVPVKSPKAEAISKDLMRRGFRCVGPTVVYSFMQAAGIV 289
            SNYCW FVN+KP++ G+RYAR +PVK+PKAE ISKDLM+RGFRCVGPTVVYSFMQ AGIV
Sbjct: 235  SNYCWRFVNNKPLRNGFRYARQIPVKTPKAEFISKDLMQRGFRCVGPTVVYSFMQVAGIV 294

Query: 288  NDHLTTCFRYQECISNVKKDAEAMTQETE-LAVALKKTCLS 169
            NDHL TCFRYQECI+NVKK  +   +E+E +  AL+ TCLS
Sbjct: 295  NDHLLTCFRYQECIANVKKKCDPDVEESERVTKALENTCLS 335


>ref|XP_002302474.1| predicted protein [Populus trichocarpa] gi|222844200|gb|EEE81747.1|
           predicted protein [Populus trichocarpa]
          Length = 279

 Score =  332 bits (850), Expect = 1e-88
 Identities = 164/243 (67%), Positives = 191/243 (78%), Gaps = 2/243 (0%)
 Frame = -1

Query: 891 HHGLKSGKVAPSGAGDGE-EQLLERPIVIKRCDWITPNSDRLYAIFHDEEWGIPVHDDNK 715
           H+G+K  +   +G    +     ERP+  KRCDWITPNSD LY  FHDEEWG+PV+DD K
Sbjct: 37  HYGIKKVEDVRNGREIKDVSSKKERPV--KRCDWITPNSDPLYMSFHDEEWGVPVYDDRK 94

Query: 714 LFELLVLSTALAELSWPDILNQRDIFRKLLDNFDPASVAKFNDKNIQLLKANGNPLLSEP 535
           LFELLV S ALAELSWP IL+ RDIF KL DNFDP+S+A+F +K +  L+ NGN LLSEP
Sbjct: 95  LFELLVYSQALAELSWPAILHMRDIFWKLFDNFDPSSIAQFTEKKLLSLRFNGNLLLSEP 154

Query: 534 KLRAVVENAKQMLKVQQEFGSFSNYCWIFVNHKPIKKGYRYARHVPVKSPKAEAISKDLM 355
           KLRAVVENAKQMLK+QQEFGSFSNYCW FVN KP++ G+RYAR VPVK+PKAE ISKDLM
Sbjct: 155 KLRAVVENAKQMLKIQQEFGSFSNYCWRFVNQKPLRNGFRYARQVPVKTPKAELISKDLM 214

Query: 354 RRGFRCVGPTVVYSFMQAAGIVNDHLTTCFRYQECISNVKKDAEAMTQETELAV-ALKKT 178
           +RGFRCVGPT VYSFMQ AG VNDHL  CFRYQEC  +VKKD +  ++ETE+   AL  T
Sbjct: 215 QRGFRCVGPTAVYSFMQVAGFVNDHLKACFRYQECNVDVKKDFKPKSEETEMVTKALGNT 274

Query: 177 CLS 169
           C+S
Sbjct: 275 CVS 277


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