BLASTX nr result

ID: Coptis21_contig00015557 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00015557
         (634 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAJ34603.1| unnamed protein product [Thellungiella halophila]     126   4e-27
ref|XP_002336761.1| predicted protein [Populus trichocarpa] gi|2...   124   1e-26
ref|XP_002863281.1| oxidoreductase [Arabidopsis lyrata subsp. ly...   124   1e-26
ref|NP_193037.1| putative quinone-oxidoreductase-like protein [A...   124   2e-26
gb|ABK96194.1| unknown [Populus trichocarpa]                          122   5e-26

>dbj|BAJ34603.1| unnamed protein product [Thellungiella halophila]
          Length = 329

 Score =  126 bits (316), Expect = 4e-27
 Identities = 76/146 (52%), Positives = 93/146 (63%), Gaps = 17/146 (11%)
 Frame = -3

Query: 599 SHIAATCGARNTNFGKSLGADCVLDY*TSDGVVWKYPSGVKDDVVIHCAFLCQHF*NKFE 420
           +H+ ATCGARN +F KSLGAD VLDY T +G   K PSG K D VIHCA       + FE
Sbjct: 181 AHVTATCGARNIDFVKSLGADEVLDYKTPEGAALKSPSGKKYDAVIHCANGIPF--STFE 238

Query: 419 -------KVIDNTPGLCAFTTFA------SKKQQVPMILIPKAE----LIWKGKEGKLKT 291
                  KVID TPG  A  T+A      SKKQ VP++LIPKAE    ++   KEGK+KT
Sbjct: 239 PNLAANGKVIDITPGPSAMWTYAVKKITMSKKQLVPLLLIPKAENLEFMVNLVKEGKVKT 298

Query: 290 LINSKNPWSNVEEAWSKDTDGHTSGR 213
           +I+SK+P S  EEAW+K  DGH +G+
Sbjct: 299 VIDSKHPLSKAEEAWAKSIDGHATGK 324


>ref|XP_002336761.1| predicted protein [Populus trichocarpa] gi|222836670|gb|EEE75063.1|
           predicted protein [Populus trichocarpa]
          Length = 229

 Score =  124 bits (312), Expect = 1e-26
 Identities = 76/146 (52%), Positives = 90/146 (61%), Gaps = 17/146 (11%)
 Frame = -3

Query: 599 SHIAATCGARNTNFGKSLGADCVLDY*TSDGVVWKYPSGVKDDVVIHCAFLCQHF*NKFE 420
           +H+ ATCGARN  F KSLGAD VLDY T +G   K PSG K D VIHCA       + FE
Sbjct: 81  THVTATCGARNIEFVKSLGADEVLDYKTPEGAALKSPSGKKYDAVIHCAAGVPW--STFE 138

Query: 419 -------KVIDNTPGLCAFTTFA------SKKQQVPMILIPKAE----LIWKGKEGKLKT 291
                  KVID TPG  AF TFA      SKKQ VP++LIP  E    L+   KEGKLKT
Sbjct: 139 PNLSANGKVIDITPGPSAFMTFAFKKLTFSKKQLVPLLLIPNGENLNYLVNLVKEGKLKT 198

Query: 290 LINSKNPWSNVEEAWSKDTDGHTSGR 213
           +I+SK+P S  E+AW+K  D H +G+
Sbjct: 199 VIDSKHPLSRAEDAWAKSIDSHATGK 224


>ref|XP_002863281.1| oxidoreductase [Arabidopsis lyrata subsp. lyrata]
           gi|297309115|gb|EFH39540.1| oxidoreductase [Arabidopsis
           lyrata subsp. lyrata]
          Length = 329

 Score =  124 bits (311), Expect = 1e-26
 Identities = 74/146 (50%), Positives = 93/146 (63%), Gaps = 17/146 (11%)
 Frame = -3

Query: 599 SHIAATCGARNTNFGKSLGADCVLDY*TSDGVVWKYPSGVKDDVVIHCAFLCQHF*NKFE 420
           +H+ ATCGARN +F KSLGAD VLDY T +G   K PSG K D V+HCA       + FE
Sbjct: 181 AHVTATCGARNIDFVKSLGADEVLDYKTPEGATLKSPSGKKYDAVVHCANGIPF--STFE 238

Query: 419 -------KVIDNTPGLCAFTTFA------SKKQQVPMILIPKAE----LIWKGKEGKLKT 291
                  KVID TPG  A  T+A      SKKQ VP++LIPKAE    ++   KEGK+KT
Sbjct: 239 PNLSENGKVIDITPGPSAMWTYAVKKVTMSKKQLVPLLLIPKAENLEFMVNLLKEGKVKT 298

Query: 290 LINSKNPWSNVEEAWSKDTDGHTSGR 213
           +I+SK+P S  E+AW+K  DGH +G+
Sbjct: 299 VIDSKHPLSKAEDAWAKSIDGHATGK 324


>ref|NP_193037.1| putative quinone-oxidoreductase-like protein [Arabidopsis thaliana]
           gi|67460977|sp|Q9SV68.1|QORH_ARATH RecName:
           Full=Putative quinone-oxidoreductase homolog,
           chloroplastic gi|15724256|gb|AAL06521.1|AF412068_1
           AT4g13010/F25G13_100 [Arabidopsis thaliana]
           gi|5123942|emb|CAB45500.1| putative protein [Arabidopsis
           thaliana] gi|7268003|emb|CAB78343.1| putative protein
           [Arabidopsis thaliana] gi|15028001|gb|AAK76531.1|
           unknown protein [Arabidopsis thaliana]
           gi|15912237|gb|AAL08252.1| AT4g13010/F25G13_100
           [Arabidopsis thaliana] gi|21436057|gb|AAM51229.1|
           unknown protein [Arabidopsis thaliana]
           gi|332657813|gb|AEE83213.1| putative
           quinone-oxidoreductase-like protein [Arabidopsis
           thaliana]
          Length = 329

 Score =  124 bits (310), Expect = 2e-26
 Identities = 72/144 (50%), Positives = 93/144 (64%), Gaps = 15/144 (10%)
 Frame = -3

Query: 599 SHIAATCGARNTNFGKSLGADCVLDY*TSDGVVWKYPSGVKDDVVIHCA-----FLCQHF 435
           +H+ ATCGARN  F KSLGAD VLDY T +G   K PSG K D V+HCA      + +  
Sbjct: 181 AHVTATCGARNIEFVKSLGADEVLDYKTPEGAALKSPSGKKYDAVVHCANGIPFSVFEPN 240

Query: 434 *NKFEKVIDNTPGLCAFTTFA------SKKQQVPMILIPKAE----LIWKGKEGKLKTLI 285
            ++  KVID TPG  A  T+A      SKKQ VP++LIPKAE    ++   KEGK+KT+I
Sbjct: 241 LSENGKVIDITPGPNAMWTYAVKKITMSKKQLVPLLLIPKAENLEFMVNLVKEGKVKTVI 300

Query: 284 NSKNPWSNVEEAWSKDTDGHTSGR 213
           +SK+P S  E+AW+K  DGH +G+
Sbjct: 301 DSKHPLSKAEDAWAKSIDGHATGK 324


>gb|ABK96194.1| unknown [Populus trichocarpa]
          Length = 329

 Score =  122 bits (306), Expect = 5e-26
 Identities = 75/146 (51%), Positives = 90/146 (61%), Gaps = 17/146 (11%)
 Frame = -3

Query: 599 SHIAATCGARNTNFGKSLGADCVLDY*TSDGVVWKYPSGVKDDVVIHCAFLCQHF*NKFE 420
           +H+ ATCGARN  F KSLGAD VLDY T +G   K PSG K D VIHCA       + FE
Sbjct: 181 THVTATCGARNIEFVKSLGADEVLDYKTPEGAALKSPSGKKYDAVIHCAAGIPW--STFE 238

Query: 419 -------KVIDNTPGLCAFTTFA------SKKQQVPMILIPKAE----LIWKGKEGKLKT 291
                  KVID TPGL A+   A      SKKQ VP++LIP  E    L+   KEGKLKT
Sbjct: 239 PNLSANGKVIDITPGLSAYMASAFKKLTFSKKQLVPLLLIPNGENLNYLVNLVKEGKLKT 298

Query: 290 LINSKNPWSNVEEAWSKDTDGHTSGR 213
           +I+SK+P S  E+AW+K  DGH +G+
Sbjct: 299 VIDSKHPLSRAEDAWAKIIDGHATGK 324


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