BLASTX nr result

ID: Coptis21_contig00015556 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00015556
         (1165 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002516868.1| conserved hypothetical protein [Ricinus comm...    63   1e-07
ref|XP_002311843.1| predicted protein [Populus trichocarpa] gi|2...    61   5e-07
emb|CBI26113.3| unnamed protein product [Vitis vinifera]               60   1e-06
ref|XP_002276706.1| PREDICTED: uncharacterized protein LOC100251...    60   1e-06
ref|XP_004150810.1| PREDICTED: uncharacterized protein LOC101221...    60   1e-06

>ref|XP_002516868.1| conserved hypothetical protein [Ricinus communis]
           gi|223543956|gb|EEF45482.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 287

 Score = 63.2 bits (152), Expect = 1e-07
 Identities = 31/50 (62%), Positives = 39/50 (78%)
 Frame = +1

Query: 706 GRIVTTYHLEELIQIGINPSLKGNEGIRKFP*VIFYAPPSRSAYYRSDVR 855
           G+ +TT H +ELI+IGINPSLKG + I +FP VIF APPSR++ Y  DVR
Sbjct: 60  GQTLTTDHHDELIKIGINPSLKGTKPIHQFPYVIFCAPPSRTSDYPGDVR 109


>ref|XP_002311843.1| predicted protein [Populus trichocarpa] gi|222851663|gb|EEE89210.1|
           predicted protein [Populus trichocarpa]
          Length = 304

 Score = 61.2 bits (147), Expect = 5e-07
 Identities = 29/50 (58%), Positives = 39/50 (78%)
 Frame = +1

Query: 706 GRIVTTYHLEELIQIGINPSLKGNEGIRKFP*VIFYAPPSRSAYYRSDVR 855
           G+ VTT H +ELI++GINPSLKG +  +++P VIF APPSR++ Y  DVR
Sbjct: 60  GQTVTTDHHDELIKMGINPSLKGTKATQQYPYVIFCAPPSRTSDYPGDVR 109


>emb|CBI26113.3| unnamed protein product [Vitis vinifera]
          Length = 410

 Score = 60.1 bits (144), Expect = 1e-06
 Identities = 29/50 (58%), Positives = 39/50 (78%)
 Frame = +1

Query: 706 GRIVTTYHLEELIQIGINPSLKGNEGIRKFP*VIFYAPPSRSAYYRSDVR 855
           G+ +TT H +EL++IGINPSLKG +   +FP VIF APPSR++ Y +DVR
Sbjct: 175 GQTMTTDHHDELVKIGINPSLKGVKTTHQFPYVIFCAPPSRTSDYPADVR 224


>ref|XP_002276706.1| PREDICTED: uncharacterized protein LOC100251108 [Vitis vinifera]
          Length = 343

 Score = 60.1 bits (144), Expect = 1e-06
 Identities = 29/50 (58%), Positives = 39/50 (78%)
 Frame = +1

Query: 706 GRIVTTYHLEELIQIGINPSLKGNEGIRKFP*VIFYAPPSRSAYYRSDVR 855
           G+ +TT H +EL++IGINPSLKG +   +FP VIF APPSR++ Y +DVR
Sbjct: 111 GQTMTTDHHDELVKIGINPSLKGVKTTHQFPYVIFCAPPSRTSDYPADVR 160


>ref|XP_004150810.1| PREDICTED: uncharacterized protein LOC101221257 [Cucumis sativus]
           gi|449496699|ref|XP_004160201.1| PREDICTED:
           uncharacterized protein LOC101225299 [Cucumis sativus]
          Length = 341

 Score = 59.7 bits (143), Expect = 1e-06
 Identities = 31/50 (62%), Positives = 35/50 (70%)
 Frame = +1

Query: 706 GRIVTTYHLEELIQIGINPSLKGNEGIRKFP*VIFYAPPSRSAYYRSDVR 855
           G+  T  H EELIQ+GI PSLKG +  R+FP VIF APPSRS  Y  DVR
Sbjct: 109 GQTFTADHHEELIQLGIQPSLKGGDVGRRFPYVIFCAPPSRSPDYPGDVR 158


Top