BLASTX nr result

ID: Coptis21_contig00015526 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00015526
         (513 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633602.1| PREDICTED: myosin-Vb-like [Vitis vinifera]        271   5e-71
emb|CBI18667.3| unnamed protein product [Vitis vinifera]              271   5e-71
ref|XP_004167020.1| PREDICTED: myosin-H heavy chain-like [Cucumi...   262   2e-68
ref|XP_004136104.1| PREDICTED: myosin-H heavy chain-like [Cucumi...   262   2e-68
ref|XP_002330875.1| predicted protein [Populus trichocarpa] gi|2...   259   2e-67

>ref|XP_003633602.1| PREDICTED: myosin-Vb-like [Vitis vinifera]
          Length = 1601

 Score =  271 bits (692), Expect = 5e-71
 Identities = 130/149 (87%), Positives = 140/149 (93%)
 Frame = -2

Query: 449  VPSLITRKTFSQVFAFINVQLFNSLLLRRECCSFSNGEYVKAGLQELEQWCSKATEEYAG 270
            VPS+ITRK FSQVF+FINVQLFNSLLLRRECCSFSNGEYVKAGLQELEQWC KA +E+AG
Sbjct: 1412 VPSMITRKIFSQVFSFINVQLFNSLLLRRECCSFSNGEYVKAGLQELEQWCFKAKDEFAG 1471

Query: 269  SSWDELQHIRQAVGFLVSHQKPQKSLNEITNELCPVLSIPQIYRIGTMFWDDKYGTQGLS 90
            SSWDELQHIRQAVGFLV HQKPQK L++ITNELCP+LSIPQIYRIGTMFWDDKYGT GLS
Sbjct: 1472 SSWDELQHIRQAVGFLVLHQKPQKFLDDITNELCPMLSIPQIYRIGTMFWDDKYGTHGLS 1531

Query: 89   QDVISKMRLLMTEDSVNMQNNSFLLDVNS 3
             DVI KMR+LMTEDS+NM NNSFLLDV+S
Sbjct: 1532 PDVIGKMRVLMTEDSINMPNNSFLLDVDS 1560


>emb|CBI18667.3| unnamed protein product [Vitis vinifera]
          Length = 1587

 Score =  271 bits (692), Expect = 5e-71
 Identities = 130/149 (87%), Positives = 140/149 (93%)
 Frame = -2

Query: 449  VPSLITRKTFSQVFAFINVQLFNSLLLRRECCSFSNGEYVKAGLQELEQWCSKATEEYAG 270
            VPS+ITRK FSQVF+FINVQLFNSLLLRRECCSFSNGEYVKAGLQELEQWC KA +E+AG
Sbjct: 1398 VPSMITRKIFSQVFSFINVQLFNSLLLRRECCSFSNGEYVKAGLQELEQWCFKAKDEFAG 1457

Query: 269  SSWDELQHIRQAVGFLVSHQKPQKSLNEITNELCPVLSIPQIYRIGTMFWDDKYGTQGLS 90
            SSWDELQHIRQAVGFLV HQKPQK L++ITNELCP+LSIPQIYRIGTMFWDDKYGT GLS
Sbjct: 1458 SSWDELQHIRQAVGFLVLHQKPQKFLDDITNELCPMLSIPQIYRIGTMFWDDKYGTHGLS 1517

Query: 89   QDVISKMRLLMTEDSVNMQNNSFLLDVNS 3
             DVI KMR+LMTEDS+NM NNSFLLDV+S
Sbjct: 1518 PDVIGKMRVLMTEDSINMPNNSFLLDVDS 1546


>ref|XP_004167020.1| PREDICTED: myosin-H heavy chain-like [Cucumis sativus]
          Length = 1491

 Score =  262 bits (669), Expect = 2e-68
 Identities = 124/149 (83%), Positives = 138/149 (92%)
 Frame = -2

Query: 449  VPSLITRKTFSQVFAFINVQLFNSLLLRRECCSFSNGEYVKAGLQELEQWCSKATEEYAG 270
            VPS+I RK F QVF+FINVQLFNSLLLRRECCSFSNGEY+K GLQELEQWC+KAT+ +AG
Sbjct: 1298 VPSMIMRKIFFQVFSFINVQLFNSLLLRRECCSFSNGEYLKLGLQELEQWCNKATDTHAG 1357

Query: 269  SSWDELQHIRQAVGFLVSHQKPQKSLNEITNELCPVLSIPQIYRIGTMFWDDKYGTQGLS 90
            +SWDELQHIRQAVGFLV HQK QKSLNEIT+ELCP+LSIPQIYRIGTMFWDDKYGTQGLS
Sbjct: 1358 NSWDELQHIRQAVGFLVLHQKSQKSLNEITDELCPILSIPQIYRIGTMFWDDKYGTQGLS 1417

Query: 89   QDVISKMRLLMTEDSVNMQNNSFLLDVNS 3
             D+I KMRLL+ EDS+N+ NNSFLLDV+S
Sbjct: 1418 PDIIGKMRLLLAEDSINIPNNSFLLDVDS 1446


>ref|XP_004136104.1| PREDICTED: myosin-H heavy chain-like [Cucumis sativus]
          Length = 1619

 Score =  262 bits (669), Expect = 2e-68
 Identities = 124/149 (83%), Positives = 138/149 (92%)
 Frame = -2

Query: 449  VPSLITRKTFSQVFAFINVQLFNSLLLRRECCSFSNGEYVKAGLQELEQWCSKATEEYAG 270
            VPS+I RK F QVF+FINVQLFNSLLLRRECCSFSNGEY+K GLQELEQWC+KAT+ +AG
Sbjct: 1426 VPSMIMRKIFFQVFSFINVQLFNSLLLRRECCSFSNGEYLKLGLQELEQWCNKATDTHAG 1485

Query: 269  SSWDELQHIRQAVGFLVSHQKPQKSLNEITNELCPVLSIPQIYRIGTMFWDDKYGTQGLS 90
            +SWDELQHIRQAVGFLV HQK QKSLNEIT+ELCP+LSIPQIYRIGTMFWDDKYGTQGLS
Sbjct: 1486 NSWDELQHIRQAVGFLVLHQKSQKSLNEITDELCPILSIPQIYRIGTMFWDDKYGTQGLS 1545

Query: 89   QDVISKMRLLMTEDSVNMQNNSFLLDVNS 3
             D+I KMRLL+ EDS+N+ NNSFLLDV+S
Sbjct: 1546 PDIIGKMRLLLAEDSINIPNNSFLLDVDS 1574


>ref|XP_002330875.1| predicted protein [Populus trichocarpa] gi|222872697|gb|EEF09828.1|
           predicted protein [Populus trichocarpa]
          Length = 189

 Score =  259 bits (662), Expect = 2e-67
 Identities = 124/143 (86%), Positives = 134/143 (93%)
 Frame = -2

Query: 431 RKTFSQVFAFINVQLFNSLLLRRECCSFSNGEYVKAGLQELEQWCSKATEEYAGSSWDEL 252
           RK FSQVF+FINVQLFNSLLLRRECCSFSNGEYVKAGLQELEQWC KA++++AGSSWDEL
Sbjct: 2   RKIFSQVFSFINVQLFNSLLLRRECCSFSNGEYVKAGLQELEQWCRKASDQFAGSSWDEL 61

Query: 251 QHIRQAVGFLVSHQKPQKSLNEITNELCPVLSIPQIYRIGTMFWDDKYGTQGLSQDVISK 72
           +HIRQAVGFLVSHQK QKSL EITNELCP+LSIPQIYRIGTMFWDDKYGTQGLS DVISK
Sbjct: 62  RHIRQAVGFLVSHQKAQKSLEEITNELCPMLSIPQIYRIGTMFWDDKYGTQGLSSDVISK 121

Query: 71  MRLLMTEDSVNMQNNSFLLDVNS 3
           MR LM EDS+ M NN+FLLDV+S
Sbjct: 122 MRTLMAEDSIKMPNNTFLLDVDS 144


Top