BLASTX nr result

ID: Coptis21_contig00015523 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00015523
         (380 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002313607.1| predicted protein [Populus trichocarpa] gi|2...    67   2e-09
ref|XP_002530530.1| conserved hypothetical protein [Ricinus comm...    64   1e-08
ref|XP_002281777.1| PREDICTED: mRNA-decapping enzyme-like protei...    64   2e-08
gb|ABR18003.1| unknown [Picea sitchensis]                              63   2e-08
ref|NP_001239626.1| uncharacterized protein LOC100783361 [Glycin...    63   3e-08

>ref|XP_002313607.1| predicted protein [Populus trichocarpa] gi|222850015|gb|EEE87562.1|
           predicted protein [Populus trichocarpa]
          Length = 369

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 46/119 (38%), Positives = 59/119 (49%), Gaps = 3/119 (2%)
 Frame = -2

Query: 379 PSLPFPNFSETSIISNRATNLVKPSVFLMQPPLSTYMIXXXXXXXXXXXXXXXXXXXXXP 200
           P +P  + S+ S  +NR  NLVKPS F+  PP ST M+                     P
Sbjct: 248 PLMPLLDVSDVSSSNNRTANLVKPSFFV--PPSSTRMMPPVSSSMPTAPPLNPPTSLHRP 305

Query: 199 YGAPLLQAFXXXXXXXXXXXXXPIN---GLGITRDKVRDALMRLVQNNQFVDMFYEELL 32
           YGAPLLQ F               +   G  I++DKVRDAL+ LVQ++QF+DM Y  LL
Sbjct: 306 YGAPLLQPFPPPTPPPSLTPASVPSPNHGPVISKDKVRDALLALVQDDQFIDMVYRTLL 364


>ref|XP_002530530.1| conserved hypothetical protein [Ricinus communis]
           gi|223529934|gb|EEF31862.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 366

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 40/103 (38%), Positives = 48/103 (46%)
 Frame = -2

Query: 337 SNRATNLVKPSVFLMQPPLSTYMIXXXXXXXXXXXXXXXXXXXXXPYGAPLLQAFXXXXX 158
           SNR TNLVKPS F   P  S  +                      PYG P+LQ F     
Sbjct: 260 SNRVTNLVKPSSFFTPPSSSAPVAPPISSAVPTAPSLHPPLNLQRPYGTPMLQPFPPPTP 319

Query: 157 XXXXXXXXPINGLGITRDKVRDALMRLVQNNQFVDMFYEELLK 29
                         I RDKVRDAL+ LVQ++QF+D+FY+ LLK
Sbjct: 320 PPSLTPSSATTMPVINRDKVRDALLTLVQDDQFIDLFYQALLK 362


>ref|XP_002281777.1| PREDICTED: mRNA-decapping enzyme-like protein [Vitis vinifera]
           gi|297740156|emb|CBI30338.3| unnamed protein product
           [Vitis vinifera]
          Length = 370

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 44/120 (36%), Positives = 55/120 (45%), Gaps = 3/120 (2%)
 Frame = -2

Query: 379 PSLPFPNFSETSIISNRATNLVKPSVFLMQPPLSTYMIXXXXXXXXXXXXXXXXXXXXXP 200
           P LP     +    SN ATNLVKPS F   P  S+ +I                     P
Sbjct: 247 PPLPIHETPDPISSSNLATNLVKPSSFFAPPSSSSALIMPPMPSSMPTAGLHPPLNLQRP 306

Query: 199 YGAPLLQAFXXXXXXXXXXXXXPIN---GLGITRDKVRDALMRLVQNNQFVDMFYEELLK 29
           YGAP+LQ F               +   G  I RDKVRDAL+ L Q+NQF+D+ ++ LLK
Sbjct: 307 YGAPMLQPFPPPAPPASLTPTSSPSPNYGPVINRDKVRDALLLLAQDNQFIDLVHQALLK 366


>gb|ABR18003.1| unknown [Picea sitchensis]
          Length = 368

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 43/107 (40%), Positives = 50/107 (46%), Gaps = 1/107 (0%)
 Frame = -2

Query: 349 TSIISNRATNLVKPSVFLMQPPLSTYMIXXXXXXXXXXXXXXXXXXXXXPYGAPLLQAFX 170
           T + S+    LVKPS F+ QP LST M                       YGAPLLQ F 
Sbjct: 258 TEVSSSSHATLVKPSFFVPQPSLSTSM-PLSLSNAPMAPPLNPLPPLQPSYGAPLLQPFP 316

Query: 169 XXXXXXXXXXXXPIN-GLGITRDKVRDALMRLVQNNQFVDMFYEELL 32
                        ++ G  ITRDKVRD L RLVQN  F+DM Y E+L
Sbjct: 317 PPAPSQSLAPASTVSQGPIITRDKVRDTLARLVQNEHFIDMVYREML 363


>ref|NP_001239626.1| uncharacterized protein LOC100783361 [Glycine max]
           gi|255636473|gb|ACU18575.1| unknown [Glycine max]
           gi|255641041|gb|ACU20800.1| unknown [Glycine max]
          Length = 368

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 47/121 (38%), Positives = 56/121 (46%), Gaps = 5/121 (4%)
 Frame = -2

Query: 379 PSLPFPNFSETSIISNRATNLVKPSVFLMQPPLSTYMIXXXXXXXXXXXXXXXXXXXXXP 200
           P +P  +  E+   SNR   LVKPS F + PP S  MI                     P
Sbjct: 244 PLIPPLDAVESICSSNRTAKLVKPS-FFVPPPSSAMMIPPVSSSTPTAPPLHPAVNVHRP 302

Query: 199 YGAPLLQAFXXXXXXXXXXXXXPIN-----GLGITRDKVRDALMRLVQNNQFVDMFYEEL 35
           YGAPLLQ F               +     G  I+R+KVRDALM LVQ+NQF+DM Y  L
Sbjct: 303 YGAPLLQPFPPPNPPLSLAPAASPSSSPNYGSVISREKVRDALMVLVQDNQFIDMVYRAL 362

Query: 34  L 32
           L
Sbjct: 363 L 363


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