BLASTX nr result

ID: Coptis21_contig00015506 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00015506
         (304 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003547645.1| PREDICTED: ribonucleoside-diphosphate reduct...   101   7e-20
ref|XP_003553928.1| PREDICTED: ribonucleoside-diphosphate reduct...    97   2e-18
ref|XP_002298630.1| predicted protein [Populus trichocarpa] gi|2...    96   2e-18
ref|XP_002328875.1| predicted protein [Populus trichocarpa] gi|2...    96   2e-18
ref|XP_001760281.1| predicted protein [Physcomitrella patens sub...    96   4e-18

>ref|XP_003547645.1| PREDICTED: ribonucleoside-diphosphate reductase small chain-like
           [Glycine max]
          Length = 330

 Score =  101 bits (251), Expect = 7e-20
 Identities = 46/50 (92%), Positives = 48/50 (96%)
 Frame = -1

Query: 301 NPFDWMELISLQGKTNFFEKRVGEYQKASVMNSLNANGGDNHVFKLDEDF 152
           NPFDWMELISLQGKTNFFEKRVGEYQKASVM+SLN NGG NHVFK+DEDF
Sbjct: 281 NPFDWMELISLQGKTNFFEKRVGEYQKASVMSSLNGNGGGNHVFKMDEDF 330


>ref|XP_003553928.1| PREDICTED: ribonucleoside-diphosphate reductase small chain-like
           [Glycine max]
          Length = 329

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 46/50 (92%), Positives = 47/50 (94%)
 Frame = -1

Query: 301 NPFDWMELISLQGKTNFFEKRVGEYQKASVMNSLNANGGDNHVFKLDEDF 152
           NPFDWMELISLQGKTNFFEKRVGEYQKASVMNSLN NGG  HVFK+DEDF
Sbjct: 281 NPFDWMELISLQGKTNFFEKRVGEYQKASVMNSLNGNGG-THVFKMDEDF 329


>ref|XP_002298630.1| predicted protein [Populus trichocarpa] gi|222845888|gb|EEE83435.1|
           predicted protein [Populus trichocarpa]
          Length = 329

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 45/50 (90%), Positives = 48/50 (96%)
 Frame = -1

Query: 301 NPFDWMELISLQGKTNFFEKRVGEYQKASVMNSLNANGGDNHVFKLDEDF 152
           NPFDWMELISLQGKTNFFEKRVGEYQKASVM+S+N N GDNHVFK+DEDF
Sbjct: 281 NPFDWMELISLQGKTNFFEKRVGEYQKASVMSSINGN-GDNHVFKMDEDF 329


>ref|XP_002328875.1| predicted protein [Populus trichocarpa] gi|222839305|gb|EEE77642.1|
           predicted protein [Populus trichocarpa]
          Length = 329

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 45/50 (90%), Positives = 48/50 (96%)
 Frame = -1

Query: 301 NPFDWMELISLQGKTNFFEKRVGEYQKASVMNSLNANGGDNHVFKLDEDF 152
           NPFDWMELISLQGKTNFFEKRVGEYQKASVM+S+N NGG NHVFK+DEDF
Sbjct: 281 NPFDWMELISLQGKTNFFEKRVGEYQKASVMSSINGNGG-NHVFKMDEDF 329


>ref|XP_001760281.1| predicted protein [Physcomitrella patens subsp. patens]
           gi|162688661|gb|EDQ75037.1| predicted protein
           [Physcomitrella patens subsp. patens]
          Length = 330

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 43/50 (86%), Positives = 47/50 (94%)
 Frame = -1

Query: 301 NPFDWMELISLQGKTNFFEKRVGEYQKASVMNSLNANGGDNHVFKLDEDF 152
           NPFDWMELISLQGKTNFFEKRVGEYQKASVM++LN N  +NHVF+LDEDF
Sbjct: 281 NPFDWMELISLQGKTNFFEKRVGEYQKASVMSNLNGNDANNHVFRLDEDF 330


Top